RNA–Protein interactions for RNA: ENSMUST00000112519.8

Chfr-202, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 3,159 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-202ENSMUST00000112519 Gm20538F6Z9R1 75 aa6.75□□□□□ -1.33
Chfr-202ENSMUST00000112519 Romo1P60603 79 aa6.75□□□□□ -1.33
Chfr-202ENSMUST00000112519 Gm9955Q8CEJ8 102 aa6.73□□□□□ -1.33
Chfr-202ENSMUST00000112519 PcloQ9QYX7 5068 aa6.73□□□□□ -1.33
Chfr-202ENSMUST00000112519 Rpl37Q9D823 97 aa6.73□□□□□ -1.33
Chfr-202ENSMUST00000112519 Lrp2A2ARV4 4660 aa6.72□□□□□ -1.33
Chfr-202ENSMUST00000112519 Birc6O88738 4882 aa6.66□□□□□ -1.34
Chfr-202ENSMUST00000112519 Dnhd1D3Z2X2 4750 aa6.62□□□□□ -1.35
Chfr-202ENSMUST00000112519 2310057N15RikQ9D6T8 200 aa6.55□□□□□ -1.36
Chfr-202ENSMUST00000112519 Krtap3-1A2A591 98 aa6.51□□□□□ -1.37
Chfr-202ENSMUST00000112519 Gm17416Q30KP4 66 aa6.5□□□□□ -1.37
Chfr-202ENSMUST00000112519 Prm2P07978 107 aa6.47□□□□□ -1.37
Chfr-202ENSMUST00000112519 Gm21887J3QQ04 176 aa6.45□□□□□ -1.38
Chfr-202ENSMUST00000112519 Gm10318A0A1W2P728 225 aa6.42□□□□□ -1.38
Chfr-202ENSMUST00000112519 2210017I01RikA0A0A6YVV1 95 aa6.39□□□□□ -1.39
Chfr-202ENSMUST00000112519 Crct1Q6PAI5 102 aa6.39□□□□□ -1.39
Chfr-202ENSMUST00000112519 Ndufaf8A2AMZ4 74 aa6.37□□□□□ -1.39
Chfr-202ENSMUST00000112519 Krtap13-1Q8K198 168 aa6.37□□□□□ -1.39
Chfr-202ENSMUST00000112519 Herc1E9PZP8 4859 aa6.37□□□□□ -1.39
Chfr-202ENSMUST00000112519 Gm19426M0QWC7 77 aa6.34□□□□□ -1.39
Chfr-202ENSMUST00000112519 BC029722A0A0N4SW31 51 aa6.34□□□□□ -1.39
Chfr-202ENSMUST00000112519 B930094E09RikQ8C4T2 136 aa6.28□□□□□ -1.4
Chfr-202ENSMUST00000112519 Sec61bQ9CQS8 96 aaKnown RBP6.27□□□□□ -1.41
Chfr-202ENSMUST00000112519 Spink7Q6IE32 76 aa6.22□□□□□ -1.41
Chfr-202ENSMUST00000112519 Krtap16-3Q8C1I6 86 aa6.22□□□□□ -1.41
Chfr-202ENSMUST00000112519 Gm19402J3QJV4 266 aa6.16□□□□□ -1.42
Chfr-202ENSMUST00000112519 Krtap1-5A2A590 122 aa6.15□□□□□ -1.43
Chfr-202ENSMUST00000112519 Lce1mQ9CR91 182 aa6.14□□□□□ -1.43
Chfr-202ENSMUST00000112519 Ubr4A2AN08 5180 aa6.14□□□□□ -1.43
Chfr-202ENSMUST00000112519 Krtap19-1Q925H2 87 aa6.12□□□□□ -1.43
Chfr-202ENSMUST00000112519 Krtap19-3Q925H6 87 aa6.1□□□□□ -1.43
Chfr-202ENSMUST00000112519 Ush2AQ2QI47 5193 aa6.1□□□□□ -1.43
Chfr-202ENSMUST00000112519 Fam229aB2KGE5 128 aa6.08□□□□□ -1.44
Chfr-202ENSMUST00000112519 ZanO88799 5376 aa6.08□□□□□ -1.44
Chfr-202ENSMUST00000112519 Gm19668J3QMD1 248 aa6.04□□□□□ -1.44
Chfr-202ENSMUST00000112519 Hmcn2A2AJ76 5100 aa6□□□□□ -1.45
Chfr-202ENSMUST00000112519 Krtap7-1Q9D3I6 87 aa5.99□□□□□ -1.45
Chfr-202ENSMUST00000112519 Fat4Q2PZL6 4981 aa5.98□□□□□ -1.45
Chfr-202ENSMUST00000112519 4932415D10RikA0A1W2P6U8 4986 aa5.97□□□□□ -1.45
Chfr-202ENSMUST00000112519 Krtap1-3A2A588 173 aa5.94□□□□□ -1.46
Chfr-202ENSMUST00000112519 Krtap4-1Q3UUY3 169 aa5.94□□□□□ -1.46
Chfr-202ENSMUST00000112519 Gm18596A0A1W2P860 280 aa5.93□□□□□ -1.46
Chfr-202ENSMUST00000112519 Gm17402F6Z0L5 76 aa5.9□□□□□ -1.47
Chfr-202ENSMUST00000112519 LorP18165 486 aa5.88□□□□□ -1.47
Chfr-202ENSMUST00000112519 Gm9112A2AI92 75 aa5.88□□□□□ -1.47
Chfr-202ENSMUST00000112519 Camk2n1Q6QWF9 78 aa5.88□□□□□ -1.47
Chfr-202ENSMUST00000112519 Sprr2a3Q4KL71 83 aa5.87□□□□□ -1.47
Chfr-202ENSMUST00000112519 Sprr2a1Q9CQK8 83 aa5.87□□□□□ -1.47
Chfr-202ENSMUST00000112519 Krtap1-4Q3V2D6 188 aa5.83□□□□□ -1.48
Chfr-202ENSMUST00000112519 Gm9789Q8BIG3 52 aa5.78□□□□□ -1.48
Chfr-202ENSMUST00000112519 Lce1jD3YUU5 139 aa5.77□□□□□ -1.49
Chfr-202ENSMUST00000112519 Rnf213E9Q555 5152 aaKnown RBP5.77□□□□□ -1.49
Chfr-202ENSMUST00000112519 Gm40193A0A1B0GT39 78 aa5.69□□□□□ -1.5
Chfr-202ENSMUST00000112519 Krtap17-1A2A5X6 109 aa5.68□□□□□ -1.5
Chfr-202ENSMUST00000112519 Gm7735D3YX18 52 aa5.68□□□□□ -1.5
Chfr-202ENSMUST00000112519 Prm1P02319 51 aa5.65□□□□□ -1.5
Chfr-202ENSMUST00000112519 A0A1Y7VJH8 109 aa5.61□□□□□ -1.51
Chfr-202ENSMUST00000112519 Krtap12-1Q9Z287 130 aa5.61□□□□□ -1.51
Chfr-202ENSMUST00000112519 Krtap19-9aF8WH65 55 aa5.54□□□□□ -1.52
Chfr-202ENSMUST00000112519 Gm11563B1AQ90 168 aa5.53□□□□□ -1.52
Chfr-202ENSMUST00000112519 Krtap4-7Q9D732 168 aa5.53□□□□□ -1.52
Chfr-202ENSMUST00000112519 Krtap28-10A0A1Y7VP58 119 aa5.45□□□□□ -1.54
Chfr-202ENSMUST00000112519 Tnp1P10856 55 aa5.41□□□□□ -1.54
Chfr-202ENSMUST00000112519 Krtap9-5A2A5X3 358 aa5.41□□□□□ -1.54
Chfr-202ENSMUST00000112519 Krtap19-2Q925I0 141 aa5.41□□□□□ -1.54
Chfr-202ENSMUST00000112519 Lce1iQ9D6P5 149 aa5.39□□□□□ -1.55
Chfr-202ENSMUST00000112519 SspoQ8CG65 4998 aa5.37□□□□□ -1.55
Chfr-202ENSMUST00000112519 Lce1a2Q9D1K4 149 aa5.35□□□□□ -1.55
Chfr-202ENSMUST00000112519 Gm11555B1AQ89 175 aa5.34□□□□□ -1.55
Chfr-202ENSMUST00000112519 A0A1Y7VLE6 161 aa5.32□□□□□ -1.56
Chfr-202ENSMUST00000112519 Gm10061D3Z714 54 aa5.25□□□□□ -1.57
Chfr-202ENSMUST00000112519 Krtap28-13A0A087WQP5 138 aa5.24□□□□□ -1.57
Chfr-202ENSMUST00000112519 Krtap8-1O08633 61 aa5.16□□□□□ -1.58
Chfr-202ENSMUST00000112519 Krtap19-9bQ99NG9 58 aa5.12□□□□□ -1.59
Chfr-202ENSMUST00000112519 Krtap9-3Q3V2C1 136 aa5.11□□□□□ -1.59
Chfr-202ENSMUST00000112519 Gm6358A0A087WPH4 74 aa5.09□□□□□ -1.59
Chfr-202ENSMUST00000112519 Krtap4-2B1AQ85 167 aa5.08□□□□□ -1.6
Chfr-202ENSMUST00000112519 A030005L19RikA0A1Y7VIU2 113 aa5.05□□□□□ -1.6
Chfr-202ENSMUST00000112519 Muc5bE9Q5I3 4800 aa5.04□□□□□ -1.6
Chfr-202ENSMUST00000112519 Mt2P02798 61 aa5.04□□□□□ -1.6
Chfr-202ENSMUST00000112519 A030005K14RikA0A1Y7VNY1 122 aa5.02□□□□□ -1.61
Chfr-202ENSMUST00000112519 Lce1hQ9D6R3 140 aa5□□□□□ -1.61
Chfr-202ENSMUST00000112519 Krtap31-2Q8CAY5 177 aa4.97□□□□□ -1.61
Chfr-202ENSMUST00000112519 Gm11569B1AQB1 180 aa4.97□□□□□ -1.61
Chfr-202ENSMUST00000112519 Mdn1A2ANY6 5589 aaKnown RBP4.92□□□□□ -1.62
Chfr-202ENSMUST00000112519 2310046K23RikA0A0A6YVW6 87 aa4.92□□□□□ -1.62
Chfr-202ENSMUST00000112519 Krtap31-1Q9D644 177 aa4.73□□□□□ -1.65
Chfr-202ENSMUST00000112519 Gm7544A0A1Y7VJ58 118 aa4.7□□□□□ -1.66
Chfr-202ENSMUST00000112519 Lce1dQ9D731 133 aa4.7□□□□□ -1.66
Chfr-202ENSMUST00000112519 Krtap22-2J3QNX6 67 aa4.7□□□□□ -1.66
Chfr-202ENSMUST00000112519 Gm10272F7CZ33 110 aa4.64□□□□□ -1.67
Chfr-202ENSMUST00000112519 Krtap4-6Q3V4B7 195 aa4.58□□□□□ -1.68
Chfr-202ENSMUST00000112519 A0A1Y7VJ07 166 aa4.56□□□□□ -1.68
Chfr-202ENSMUST00000112519 Lce1eQ9D139 143 aa4.53□□□□□ -1.68
Chfr-202ENSMUST00000112519 4933428G20RikQ9D3X4 101 aa4.46□□□□□ -1.7
Chfr-202ENSMUST00000112519 A030014E15RikA0A1Y7VJV2 120 aa4.45□□□□□ -1.7
Chfr-202ENSMUST00000112519 Sprr2gO70558 76 aa4.44□□□□□ -1.7
Chfr-202ENSMUST00000112519 Fsip2A2ARZ3 6995 aa4.43□□□□□ -1.7
Chfr-202ENSMUST00000112519 Lce1gQ9D195 139 aa4.42□□□□□ -1.7
Chfr-202ENSMUST00000112519 Gm11938Q9D3H4 131 aa4.41□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms