RNA–Protein interactions for RNA: ENSMUST00000111233.7

Limk1-202, Transcript of LIM domain kinase 1, mousemouse

TSL 1 (best) BASIC

Gene Limk1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1-202ENSMUST00000111233 Dnah8Q91XQ0 4731 aa5.19□□□□□ -1.58
Limk1-202ENSMUST00000111233 Rpl37Q9D823 97 aa5.19□□□□□ -1.58
Limk1-202ENSMUST00000111233 Ndufaf8A2AMZ4 74 aa5.17□□□□□ -1.58
Limk1-202ENSMUST00000111233 Ryr1E9PZQ0 5035 aa5.16□□□□□ -1.58
Limk1-202ENSMUST00000111233 Krtap3-1A2A591 98 aa5.08□□□□□ -1.6
Limk1-202ENSMUST00000111233 Sec61bQ9CQS8 96 aaKnown RBP5.08□□□□□ -1.6
Limk1-202ENSMUST00000111233 Gm17416Q30KP4 66 aa5.04□□□□□ -1.6
Limk1-202ENSMUST00000111233 HydinQ80W93 5154 aa5.04□□□□□ -1.6
Limk1-202ENSMUST00000111233 Kiaa1109A2AAE1 5005 aa5.03□□□□□ -1.6
Limk1-202ENSMUST00000111233 Herc2Q4U2R1 4836 aa5□□□□□ -1.61
Limk1-202ENSMUST00000111233 2210017I01RikA0A0A6YVV1 95 aa4.98□□□□□ -1.61
Limk1-202ENSMUST00000111233 2310057N15RikQ9D6T8 200 aa4.98□□□□□ -1.61
Limk1-202ENSMUST00000111233 Lrp2A2ARV4 4660 aa4.97□□□□□ -1.61
Limk1-202ENSMUST00000111233 Gm9112A2AI92 75 aa4.95□□□□□ -1.62
Limk1-202ENSMUST00000111233 Krtap13-1Q8K198 168 aa4.9□□□□□ -1.62
Limk1-202ENSMUST00000111233 Dnhd1D3Z2X2 4750 aa4.9□□□□□ -1.62
Limk1-202ENSMUST00000111233 Gm19426M0QWC7 77 aa4.89□□□□□ -1.63
Limk1-202ENSMUST00000111233 B930094E09RikQ8C4T2 136 aa4.87□□□□□ -1.63
Limk1-202ENSMUST00000111233 BC029722A0A0N4SW31 51 aa4.87□□□□□ -1.63
Limk1-202ENSMUST00000111233 Birc6O88738 4882 aa4.86□□□□□ -1.63
Limk1-202ENSMUST00000111233 Gm10318A0A1W2P728 225 aa4.83□□□□□ -1.64
Limk1-202ENSMUST00000111233 PcloQ9QYX7 5068 aa4.83□□□□□ -1.64
Limk1-202ENSMUST00000111233 Crct1Q6PAI5 102 aa4.78□□□□□ -1.64
Limk1-202ENSMUST00000111233 Gm19402J3QJV4 266 aa4.77□□□□□ -1.65
Limk1-202ENSMUST00000111233 Krtap1-5A2A590 122 aa4.72□□□□□ -1.65
Limk1-202ENSMUST00000111233 Spink7Q6IE32 76 aa4.7□□□□□ -1.66
Limk1-202ENSMUST00000111233 Krtap16-3Q8C1I6 86 aa4.66□□□□□ -1.66
Limk1-202ENSMUST00000111233 Krtap7-1Q9D3I6 87 aa4.66□□□□□ -1.66
Limk1-202ENSMUST00000111233 Gm17402F6Z0L5 76 aa4.64□□□□□ -1.67
Limk1-202ENSMUST00000111233 Fam229aB2KGE5 128 aa4.63□□□□□ -1.67
Limk1-202ENSMUST00000111233 Herc1E9PZP8 4859 aa4.6□□□□□ -1.67
Limk1-202ENSMUST00000111233 Sprr2a3Q4KL71 83 aa4.6□□□□□ -1.67
Limk1-202ENSMUST00000111233 Sprr2a1Q9CQK8 83 aa4.6□□□□□ -1.67
Limk1-202ENSMUST00000111233 Lce1mQ9CR91 182 aa4.58□□□□□ -1.68
Limk1-202ENSMUST00000111233 Gm19668J3QMD1 248 aa4.57□□□□□ -1.68
Limk1-202ENSMUST00000111233 Krtap19-1Q925H2 87 aa4.57□□□□□ -1.68
Limk1-202ENSMUST00000111233 Krtap19-3Q925H6 87 aa4.55□□□□□ -1.68
Limk1-202ENSMUST00000111233 Gm18596A0A1W2P860 280 aa4.53□□□□□ -1.68
Limk1-202ENSMUST00000111233 Ubr4A2AN08 5180 aa4.53□□□□□ -1.68
Limk1-202ENSMUST00000111233 ZanO88799 5376 aa4.51□□□□□ -1.69
Limk1-202ENSMUST00000111233 Fat4Q2PZL6 4981 aa4.48□□□□□ -1.69
Limk1-202ENSMUST00000111233 4932415D10RikA0A1W2P6U8 4986 aa4.47□□□□□ -1.69
Limk1-202ENSMUST00000111233 Camk2n1Q6QWF9 78 aa4.46□□□□□ -1.69
Limk1-202ENSMUST00000111233 Krtap1-4Q3V2D6 188 aa4.46□□□□□ -1.7
Limk1-202ENSMUST00000111233 Gm40193A0A1B0GT39 78 aa4.45□□□□□ -1.7
Limk1-202ENSMUST00000111233 Ush2AQ2QI47 5193 aa4.4□□□□□ -1.7
Limk1-202ENSMUST00000111233 Hmcn2A2AJ76 5100 aa4.37□□□□□ -1.71
Limk1-202ENSMUST00000111233 Lce1jD3YUU5 139 aa4.35□□□□□ -1.71
Limk1-202ENSMUST00000111233 Krtap1-3A2A588 173 aa4.32□□□□□ -1.72
Limk1-202ENSMUST00000111233 LorP18165 486 aa4.31□□□□□ -1.72
Limk1-202ENSMUST00000111233 Rnf213E9Q555 5152 aaKnown RBP4.27□□□□□ -1.73
Limk1-202ENSMUST00000111233 Krtap12-1Q9Z287 130 aa4.25□□□□□ -1.73
Limk1-202ENSMUST00000111233 Krtap19-9aF8WH65 55 aa4.22□□□□□ -1.73
Limk1-202ENSMUST00000111233 Krtap17-1A2A5X6 109 aa4.22□□□□□ -1.73
Limk1-202ENSMUST00000111233 Gm9789Q8BIG3 52 aa4.21□□□□□ -1.74
Limk1-202ENSMUST00000111233 Prm1P02319 51 aa4.2□□□□□ -1.74
Limk1-202ENSMUST00000111233 Gm7735D3YX18 52 aa4.18□□□□□ -1.74
Limk1-202ENSMUST00000111233 Tnp1P10856 55 aa4.16□□□□□ -1.74
Limk1-202ENSMUST00000111233 Lce1iQ9D6P5 149 aa4.07□□□□□ -1.76
Limk1-202ENSMUST00000111233 Lce1a2Q9D1K4 149 aa4.05□□□□□ -1.76
Limk1-202ENSMUST00000111233 Krtap8-1O08633 61 aa4.02□□□□□ -1.77
Limk1-202ENSMUST00000111233 Krtap9-5A2A5X3 358 aa4.01□□□□□ -1.77
Limk1-202ENSMUST00000111233 Krtap19-2Q925I0 141 aa4.01□□□□□ -1.77
Limk1-202ENSMUST00000111233 Krtap31-1Q9D644 177 aa4.01□□□□□ -1.77
Limk1-202ENSMUST00000111233 Krtap19-9bQ99NG9 58 aa3.98□□□□□ -1.77
Limk1-202ENSMUST00000111233 SspoQ8CG65 4998 aa3.97□□□□□ -1.77
Limk1-202ENSMUST00000111233 Krtap9-3Q3V2C1 136 aa3.97□□□□□ -1.77
Limk1-202ENSMUST00000111233 2310046K23RikA0A0A6YVW6 87 aa3.89□□□□□ -1.79
Limk1-202ENSMUST00000111233 Lce1hQ9D6R3 140 aa3.89□□□□□ -1.79
Limk1-202ENSMUST00000111233 Mt2P02798 61 aa3.78□□□□□ -1.8
Limk1-202ENSMUST00000111233 Muc5bE9Q5I3 4800 aa3.77□□□□□ -1.81
Limk1-202ENSMUST00000111233 Krtap31-2Q8CAY5 177 aa3.77□□□□□ -1.81
Limk1-202ENSMUST00000111233 Gm6358A0A087WPH4 74 aa3.76□□□□□ -1.81
Limk1-202ENSMUST00000111233 Gm10061D3Z714 54 aa3.75□□□□□ -1.81
Limk1-202ENSMUST00000111233 Gm11562A0PK51 136 aa3.71□□□□□ -1.82
Limk1-202ENSMUST00000111233 Lce1dQ9D731 133 aa3.67□□□□□ -1.82
Limk1-202ENSMUST00000111233 Gm11569B1AQB1 180 aa3.66□□□□□ -1.82
Limk1-202ENSMUST00000111233 Krtap4-2B1AQ85 167 aa3.65□□□□□ -1.82
Limk1-202ENSMUST00000111233 Mdn1A2ANY6 5589 aaKnown RBP3.62□□□□□ -1.83
Limk1-202ENSMUST00000111233 Lce1gQ9D195 139 aa3.56□□□□□ -1.84
Limk1-202ENSMUST00000111233 Krtap4-1Q3UUY3 169 aa3.56□□□□□ -1.84
Limk1-202ENSMUST00000111233 Gm10272F7CZ33 110 aa3.55□□□□□ -1.84
Limk1-202ENSMUST00000111233 Lce1eQ9D139 143 aa3.54□□□□□ -1.84
Limk1-202ENSMUST00000111233 Syne2Q6ZWQ0 6874 aaKnown RBP3.53□□□□□ -1.84
Limk1-202ENSMUST00000111233 Krtap22-2J3QNX6 67 aa3.53□□□□□ -1.85
Limk1-202ENSMUST00000111233 Sprr2gO70558 76 aa3.5□□□□□ -1.85
Limk1-202ENSMUST00000111233 Gm11938Q9D3H4 131 aa3.46□□□□□ -1.85
Limk1-202ENSMUST00000111233 4933428G20RikQ9D3X4 101 aa3.44□□□□□ -1.86
Limk1-202ENSMUST00000111233 Gm11596B1AQB0 205 aa3.43□□□□□ -1.86
Limk1-202ENSMUST00000111233 Sprr2dO70555 85 aa3.41□□□□□ -1.86
Limk1-202ENSMUST00000111233 Krtap4-6Q3V4B7 195 aa3.41□□□□□ -1.86
Limk1-202ENSMUST00000111233 Lce1cQ9D1C5 147 aa3.4□□□□□ -1.87
Limk1-202ENSMUST00000111233 Gm11555B1AQ89 175 aa3.39□□□□□ -1.87
Limk1-202ENSMUST00000111233 Syne1Q6ZWR6 8799 aa3.34□□□□□ -1.87
Limk1-202ENSMUST00000111233 Gm11563B1AQ90 168 aa3.3□□□□□ -1.88
Limk1-202ENSMUST00000111233 Krtap4-7Q9D732 168 aa3.3□□□□□ -1.88
Limk1-202ENSMUST00000111233 Lce1fB9EJP6 147 aa3.27□□□□□ -1.89
Limk1-202ENSMUST00000111233 Lce1a1Q9CQH5 143 aa3.27□□□□□ -1.89
Limk1-202ENSMUST00000111233 Gm10100J3QK64 120 aa3.27□□□□□ -1.89
Limk1-202ENSMUST00000111233 Lce3bQ9CQM7 98 aa3.26□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms