RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Defb39Q70KL3 74 aa4.47□□□□□ -1.69
Cd44-208ENSMUST00000111198 Gm9736A0A1W2P7N1 277 aa4.45□□□□□ -1.7
Cd44-208ENSMUST00000111198 Gm9789Q8BIG3 52 aa4.45□□□□□ -1.7
Cd44-208ENSMUST00000111198 Cypt15B1AXS0 87 aa4.44□□□□□ -1.7
Cd44-208ENSMUST00000111198 Krtap31-2Q8CAY5 177 aa4.44□□□□□ -1.7
Cd44-208ENSMUST00000111198 Pla2g10Q9QXX3 151 aa4.44□□□□□ -1.7
Cd44-208ENSMUST00000111198 Ush2AQ2QI47 5193 aa4.43□□□□□ -1.7
Cd44-208ENSMUST00000111198 Anapc11Q9CPX9 84 aa4.43□□□□□ -1.7
Cd44-208ENSMUST00000111198 Gm10999F6Q4M4 69 aa4.41□□□□□ -1.7
Cd44-208ENSMUST00000111198 Krtap31-1Q9D644 177 aa4.41□□□□□ -1.7
Cd44-208ENSMUST00000111198 Q8BGJ3 129 aa4.38□□□□□ -1.71
Cd44-208ENSMUST00000111198 4932415D10RikA0A1W2P6U8 4986 aa4.37□□□□□ -1.71
Cd44-208ENSMUST00000111198 Fam229aB2KGE5 128 aa4.36□□□□□ -1.71
Cd44-208ENSMUST00000111198 Spaca4Q80ZQ0 127 aa4.35□□□□□ -1.71
Cd44-208ENSMUST00000111198 Ubr4A2AN08 5180 aa4.33□□□□□ -1.72
Cd44-208ENSMUST00000111198 4930507D05RikQ8C9C9 103 aa4.33□□□□□ -1.72
Cd44-208ENSMUST00000111198 Hmcn2A2AJ76 5100 aa4.33□□□□□ -1.72
Cd44-208ENSMUST00000111198 2310079G19RikQ9D6L6 185 aa4.31□□□□□ -1.72
Cd44-208ENSMUST00000111198 Defb1P56386 69 aa4.3□□□□□ -1.72
Cd44-208ENSMUST00000111198 Gm5965D3Z724 196 aa4.27□□□□□ -1.73
Cd44-208ENSMUST00000111198 Rps29P62274 56 aa4.22□□□□□ -1.73
Cd44-208ENSMUST00000111198 Gm4491E0CX42 125 aa4.2□□□□□ -1.74
Cd44-208ENSMUST00000111198 Gm5767A0A0J9YTU8 78 aa4.19□□□□□ -1.74
Cd44-208ENSMUST00000111198 A0A1Y7VJH8 109 aa4.18□□□□□ -1.74
Cd44-208ENSMUST00000111198 LorP18165 486 aa4.18□□□□□ -1.74
Cd44-208ENSMUST00000111198 Gm9112A2AI92 75 aa4.16□□□□□ -1.74
Cd44-208ENSMUST00000111198 Gm19402J3QJV4 266 aa4.16□□□□□ -1.74
Cd44-208ENSMUST00000111198 Camk2n1Q6QWF9 78 aa4.15□□□□□ -1.74
Cd44-208ENSMUST00000111198 Krtap1-3A2A588 173 aa4.14□□□□□ -1.75
Cd44-208ENSMUST00000111198 Cox6b2Q80ZN9 88 aa4.13□□□□□ -1.75
Cd44-208ENSMUST00000111198 Gm20537G3UYK7 97 aa4.12□□□□□ -1.75
Cd44-208ENSMUST00000111198 Gm3880A0A1B0GSB3 72 aa4.11□□□□□ -1.75
Cd44-208ENSMUST00000111198 Romo1P60603 79 aa4.09□□□□□ -1.76
Cd44-208ENSMUST00000111198 Lce1jD3YUU5 139 aa4.08□□□□□ -1.76
Cd44-208ENSMUST00000111198 Gm9955Q8CEJ8 102 aa4.08□□□□□ -1.76
Cd44-208ENSMUST00000111198 ZanO88799 5376 aa4.07□□□□□ -1.76
Cd44-208ENSMUST00000111198 Crct1Q6PAI5 102 aa4.05□□□□□ -1.76
Cd44-208ENSMUST00000111198 Krtap28-10A0A1Y7VP58 119 aa4.03□□□□□ -1.76
Cd44-208ENSMUST00000111198 Gm17606F6ZL36 78 aa4.02□□□□□ -1.77
Cd44-208ENSMUST00000111198 Fat4Q2PZL6 4981 aa4.02□□□□□ -1.77
Cd44-208ENSMUST00000111198 Ndufaf8A2AMZ4 74 aa3.99□□□□□ -1.77
Cd44-208ENSMUST00000111198 Krtap17-1A2A5X6 109 aa3.98□□□□□ -1.77
Cd44-208ENSMUST00000111198 Rpl37Q9D823 97 aa3.98□□□□□ -1.77
Cd44-208ENSMUST00000111198 Gm11562A0PK51 136 aa3.97□□□□□ -1.77
Cd44-208ENSMUST00000111198 Gm10061D3Z714 54 aa3.94□□□□□ -1.78
Cd44-208ENSMUST00000111198 Rnf213E9Q555 5152 aaKnown RBP3.93□□□□□ -1.78
Cd44-208ENSMUST00000111198 CriptO70333 101 aa3.93□□□□□ -1.78
Cd44-208ENSMUST00000111198 Gm10382Q3V0T5 144 aa3.93□□□□□ -1.78
Cd44-208ENSMUST00000111198 Krtap16-3Q8C1I6 86 aa3.92□□□□□ -1.78
Cd44-208ENSMUST00000111198 Krtap19-3Q925H6 87 aa3.92□□□□□ -1.78
Cd44-208ENSMUST00000111198 Krtap19-1Q925H2 87 aa3.91□□□□□ -1.78
Cd44-208ENSMUST00000111198 Lce1bQ9D149 137 aa3.89□□□□□ -1.79
Cd44-208ENSMUST00000111198 Gm10318A0A1W2P728 225 aa3.88□□□□□ -1.79
Cd44-208ENSMUST00000111198 A0A1Y7VLE6 161 aa3.88□□□□□ -1.79
Cd44-208ENSMUST00000111198 Gm11569B1AQB1 180 aa3.87□□□□□ -1.79
Cd44-208ENSMUST00000111198 Krtap1-4Q3V2D6 188 aa3.87□□□□□ -1.79
Cd44-208ENSMUST00000111198 Gm17416Q30KP4 66 aa3.83□□□□□ -1.8
Cd44-208ENSMUST00000111198 Krtap28-13A0A087WQP5 138 aa3.81□□□□□ -1.8
Cd44-208ENSMUST00000111198 Lce1hQ9D6R3 140 aa3.81□□□□□ -1.8
Cd44-208ENSMUST00000111198 Gm19426M0QWC7 77 aa3.78□□□□□ -1.8
Cd44-208ENSMUST00000111198 Lce1gQ9D195 139 aa3.77□□□□□ -1.81
Cd44-208ENSMUST00000111198 SspoQ8CG65 4998 aa3.77□□□□□ -1.81
Cd44-208ENSMUST00000111198 A030005L19RikA0A1Y7VIU2 113 aa3.76□□□□□ -1.81
Cd44-208ENSMUST00000111198 Gm7544A0A1Y7VJ58 118 aa3.74□□□□□ -1.81
Cd44-208ENSMUST00000111198 B930094E09RikQ8C4T2 136 aa3.74□□□□□ -1.81
Cd44-208ENSMUST00000111198 Gm38119A0A0A6YX29 146 aa3.72□□□□□ -1.81
Cd44-208ENSMUST00000111198 BC029722A0A0N4SW31 51 aa3.71□□□□□ -1.82
Cd44-208ENSMUST00000111198 A030005K14RikA0A1Y7VNY1 122 aa3.69□□□□□ -1.82
Cd44-208ENSMUST00000111198 Gm19668J3QMD1 248 aa3.69□□□□□ -1.82
Cd44-208ENSMUST00000111198 Gm40193A0A1B0GT39 78 aa3.68□□□□□ -1.82
Cd44-208ENSMUST00000111198 Gm17402F6Z0L5 76 aa3.68□□□□□ -1.82
Cd44-208ENSMUST00000111198 Krtap13-1Q8K198 168 aa3.67□□□□□ -1.82
Cd44-208ENSMUST00000111198 Syne2Q6ZWQ0 6874 aaKnown RBP3.64□□□□□ -1.83
Cd44-208ENSMUST00000111198 Lce1eQ9D139 143 aa3.63□□□□□ -1.83
Cd44-208ENSMUST00000111198 Krtap7-1Q9D3I6 87 aa3.63□□□□□ -1.83
Cd44-208ENSMUST00000111198 Gm11596B1AQB0 205 aa3.62□□□□□ -1.83
Cd44-208ENSMUST00000111198 Krtap1-5A2A590 122 aa3.61□□□□□ -1.83
Cd44-208ENSMUST00000111198 Krtap4-6Q3V4B7 195 aa3.56□□□□□ -1.84
Cd44-208ENSMUST00000111198 Krtap9-5A2A5X3 358 aa3.54□□□□□ -1.84
Cd44-208ENSMUST00000111198 Krtap19-2Q925I0 141 aa3.54□□□□□ -1.84
Cd44-208ENSMUST00000111198 Lce1a1Q9CQH5 143 aa3.54□□□□□ -1.84
Cd44-208ENSMUST00000111198 Muc5bE9Q5I3 4800 aa3.5□□□□□ -1.85
Cd44-208ENSMUST00000111198 Sprr2a3Q4KL71 83 aa3.49□□□□□ -1.85
Cd44-208ENSMUST00000111198 Sprr2a1Q9CQK8 83 aa3.49□□□□□ -1.85
Cd44-208ENSMUST00000111198 Spink7Q6IE32 76 aa3.47□□□□□ -1.85
Cd44-208ENSMUST00000111198 Krtap12-1Q9Z287 130 aa3.47□□□□□ -1.85
Cd44-208ENSMUST00000111198 Mdn1A2ANY6 5589 aaKnown RBP3.46□□□□□ -1.86
Cd44-208ENSMUST00000111198 A0A286YCP9 139 aa3.45□□□□□ -1.86
Cd44-208ENSMUST00000111198 Gm11564A2A4L9 201 aa3.42□□□□□ -1.86
Cd44-208ENSMUST00000111198 Gm11595B1AQA7 289 aa3.42□□□□□ -1.86
Cd44-208ENSMUST00000111198 Krtap4-8B1AQA8 209 aa3.42□□□□□ -1.86
Cd44-208ENSMUST00000111198 Gm11559Q9D3H7 191 aa3.42□□□□□ -1.86
Cd44-208ENSMUST00000111198 A030014E15RikA0A1Y7VJV2 120 aa3.41□□□□□ -1.86
Cd44-208ENSMUST00000111198 Gm6358A0A087WPH4 74 aa3.4□□□□□ -1.87
Cd44-208ENSMUST00000111198 A0A1Y7VJ07 166 aa3.39□□□□□ -1.87
Cd44-208ENSMUST00000111198 Krtap19-9aF8WH65 55 aa3.38□□□□□ -1.87
Cd44-208ENSMUST00000111198 Lce1dQ9D731 133 aa3.32□□□□□ -1.88
Cd44-208ENSMUST00000111198 Krtap4-9B1AQA9 244 aa3.32□□□□□ -1.88
Cd44-208ENSMUST00000111198 Lce1lQ9D1G7 135 aa3.32□□□□□ -1.88
Cd44-208ENSMUST00000111198 A030003K21RikA0A1Y7VIM3 128 aa3.31□□□□□ -1.88
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms