RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Gm20661K7N787 53 aa4.45□□□□□ -1.7
Clcn3-205ENSMUST00000110302 Lrp2A2ARV4 4660 aa4.45□□□□□ -1.7
Clcn3-205ENSMUST00000110302 4930507D05RikQ8C9C9 103 aa4.44□□□□□ -1.7
Clcn3-205ENSMUST00000110302 2310057N15RikQ9D6T8 200 aa4.44□□□□□ -1.7
Clcn3-205ENSMUST00000110302 CriptO70333 101 aa4.43□□□□□ -1.7
Clcn3-205ENSMUST00000110302 Ndufb1P0DN34 57 aa4.43□□□□□ -1.7
Clcn3-205ENSMUST00000110302 Gm17416Q30KP4 66 aa4.38□□□□□ -1.71
Clcn3-205ENSMUST00000110302 Uqcr11Q9CPX8 56 aa4.37□□□□□ -1.71
Clcn3-205ENSMUST00000110302 Lce1mQ9CR91 182 aa4.37□□□□□ -1.71
Clcn3-205ENSMUST00000110302 2210017I01RikA0A0A6YVV1 95 aa4.36□□□□□ -1.71
Clcn3-205ENSMUST00000110302 Fam229aB2KGE5 128 aa4.33□□□□□ -1.72
Clcn3-205ENSMUST00000110302 Defb1P56386 69 aa4.32□□□□□ -1.72
Clcn3-205ENSMUST00000110302 Cox6b2Q80ZN9 88 aa4.31□□□□□ -1.72
Clcn3-205ENSMUST00000110302 Herc1E9PZP8 4859 aa4.3□□□□□ -1.72
Clcn3-205ENSMUST00000110302 Krtap4-1Q3UUY3 169 aa4.24□□□□□ -1.73
Clcn3-205ENSMUST00000110302 Gm18596A0A1W2P860 280 aa4.23□□□□□ -1.73
Clcn3-205ENSMUST00000110302 Krtap3-1A2A591 98 aa4.23□□□□□ -1.73
Clcn3-205ENSMUST00000110302 Hmcn2A2AJ76 5100 aa4.17□□□□□ -1.74
Clcn3-205ENSMUST00000110302 Ush2AQ2QI47 5193 aa4.17□□□□□ -1.74
Clcn3-205ENSMUST00000110302 Krtap16-3Q8C1I6 86 aa4.16□□□□□ -1.74
Clcn3-205ENSMUST00000110302 Krtap13-1Q8K198 168 aa4.16□□□□□ -1.74
Clcn3-205ENSMUST00000110302 Krtap1-5A2A590 122 aa4.14□□□□□ -1.75
Clcn3-205ENSMUST00000110302 Krtap19-1Q925H2 87 aa4.13□□□□□ -1.75
Clcn3-205ENSMUST00000110302 Gm10382Q3V0T5 144 aa4.12□□□□□ -1.75
Clcn3-205ENSMUST00000110302 Gm3880A0A1B0GSB3 72 aa4.11□□□□□ -1.75
Clcn3-205ENSMUST00000110302 Gm17606F6ZL36 78 aa4.1□□□□□ -1.75
Clcn3-205ENSMUST00000110302 Krtap19-3Q925H6 87 aa4.09□□□□□ -1.75
Clcn3-205ENSMUST00000110302 Gm9789Q8BIG3 52 aa4.09□□□□□ -1.75
Clcn3-205ENSMUST00000110302 Prm1P02319 51 aa4.09□□□□□ -1.76
Clcn3-205ENSMUST00000110302 Gm20537G3UYK7 97 aa4.08□□□□□ -1.76
Clcn3-205ENSMUST00000110302 Camk2n1Q6QWF9 78 aa4.05□□□□□ -1.76
Clcn3-205ENSMUST00000110302 Gm9955Q8CEJ8 102 aa4.04□□□□□ -1.76
Clcn3-205ENSMUST00000110302 Krtap1-3A2A588 173 aa4.04□□□□□ -1.76
Clcn3-205ENSMUST00000110302 4932415D10RikA0A1W2P6U8 4986 aa4.04□□□□□ -1.76
Clcn3-205ENSMUST00000110302 Ubr4A2AN08 5180 aa4.03□□□□□ -1.76
Clcn3-205ENSMUST00000110302 Gm7735D3YX18 52 aa4.03□□□□□ -1.76
Clcn3-205ENSMUST00000110302 ZanO88799 5376 aa4.03□□□□□ -1.76
Clcn3-205ENSMUST00000110302 Crct1Q6PAI5 102 aa4.01□□□□□ -1.77
Clcn3-205ENSMUST00000110302 Rnf213E9Q555 5152 aaKnown RBP3.99□□□□□ -1.77
Clcn3-205ENSMUST00000110302 Gm19402J3QJV4 266 aa3.99□□□□□ -1.77
Clcn3-205ENSMUST00000110302 BC029722A0A0N4SW31 51 aa3.97□□□□□ -1.77
Clcn3-205ENSMUST00000110302 Gm11563B1AQ90 168 aa3.95□□□□□ -1.78
Clcn3-205ENSMUST00000110302 Krtap1-4Q3V2D6 188 aa3.95□□□□□ -1.78
Clcn3-205ENSMUST00000110302 Krtap4-7Q9D732 168 aa3.95□□□□□ -1.78
Clcn3-205ENSMUST00000110302 Gm10318A0A1W2P728 225 aa3.94□□□□□ -1.78
Clcn3-205ENSMUST00000110302 Gm17402F6Z0L5 76 aa3.9□□□□□ -1.78
Clcn3-205ENSMUST00000110302 Fat4Q2PZL6 4981 aa3.89□□□□□ -1.79
Clcn3-205ENSMUST00000110302 B930094E09RikQ8C4T2 136 aa3.85□□□□□ -1.79
Clcn3-205ENSMUST00000110302 LorP18165 486 aa3.85□□□□□ -1.79
Clcn3-205ENSMUST00000110302 Sprr2a3Q4KL71 83 aa3.84□□□□□ -1.79
Clcn3-205ENSMUST00000110302 Sprr2a1Q9CQK8 83 aa3.84□□□□□ -1.79
Clcn3-205ENSMUST00000110302 SspoQ8CG65 4998 aa3.84□□□□□ -1.8
Clcn3-205ENSMUST00000110302 Gm19426M0QWC7 77 aa3.83□□□□□ -1.8
Clcn3-205ENSMUST00000110302 Gm11555B1AQ89 175 aa3.81□□□□□ -1.8
Clcn3-205ENSMUST00000110302 Krtap31-1Q9D644 177 aa3.8□□□□□ -1.8
Clcn3-205ENSMUST00000110302 Lce1jD3YUU5 139 aa3.77□□□□□ -1.81
Clcn3-205ENSMUST00000110302 Krtap4-2B1AQ85 167 aa3.74□□□□□ -1.81
Clcn3-205ENSMUST00000110302 Krtap12-1Q9Z287 130 aa3.73□□□□□ -1.81
Clcn3-205ENSMUST00000110302 Spink7Q6IE32 76 aa3.71□□□□□ -1.82
Clcn3-205ENSMUST00000110302 Krtap19-9aF8WH65 55 aa3.69□□□□□ -1.82
Clcn3-205ENSMUST00000110302 Krtap31-2Q8CAY5 177 aa3.66□□□□□ -1.82
Clcn3-205ENSMUST00000110302 Gm10061D3Z714 54 aa3.62□□□□□ -1.83
Clcn3-205ENSMUST00000110302 Krtap19-2Q925I0 141 aa3.62□□□□□ -1.83
Clcn3-205ENSMUST00000110302 Krtap17-1A2A5X6 109 aa3.62□□□□□ -1.83
Clcn3-205ENSMUST00000110302 Krtap9-5A2A5X3 358 aa3.57□□□□□ -1.84
Clcn3-205ENSMUST00000110302 Gm19668J3QMD1 248 aa3.57□□□□□ -1.84
Clcn3-205ENSMUST00000110302 Lce1iQ9D6P5 149 aa3.55□□□□□ -1.84
Clcn3-205ENSMUST00000110302 Muc5bE9Q5I3 4800 aa3.54□□□□□ -1.84
Clcn3-205ENSMUST00000110302 Gm11562A0PK51 136 aa3.53□□□□□ -1.84
Clcn3-205ENSMUST00000110302 Lce1a2Q9D1K4 149 aa3.51□□□□□ -1.85
Clcn3-205ENSMUST00000110302 Krtap7-1Q9D3I6 87 aa3.49□□□□□ -1.85
Clcn3-205ENSMUST00000110302 Gm11569B1AQB1 180 aa3.44□□□□□ -1.86
Clcn3-205ENSMUST00000110302 Krtap8-1O08633 61 aa3.44□□□□□ -1.86
Clcn3-205ENSMUST00000110302 Gm6358A0A087WPH4 74 aa3.42□□□□□ -1.86
Clcn3-205ENSMUST00000110302 4933428G20RikQ9D3X4 101 aa3.42□□□□□ -1.86
Clcn3-205ENSMUST00000110302 Gm40193A0A1B0GT39 78 aa3.4□□□□□ -1.86
Clcn3-205ENSMUST00000110302 Krtap19-9bQ99NG9 58 aa3.37□□□□□ -1.87
Clcn3-205ENSMUST00000110302 Lce1gQ9D195 139 aa3.35□□□□□ -1.87
Clcn3-205ENSMUST00000110302 Mt2P02798 61 aa3.33□□□□□ -1.88
Clcn3-205ENSMUST00000110302 A0A1Y7VLE6 161 aa3.28□□□□□ -1.88
Clcn3-205ENSMUST00000110302 Gm11596B1AQB0 205 aa3.21□□□□□ -1.9
Clcn3-205ENSMUST00000110302 Krtap9-3Q3V2C1 136 aa3.21□□□□□ -1.9
Clcn3-205ENSMUST00000110302 Tnp1P10856 55 aa3.2□□□□□ -1.9
Clcn3-205ENSMUST00000110302 Lce1hQ9D6R3 140 aa3.19□□□□□ -1.9
Clcn3-205ENSMUST00000110302 Syne2Q6ZWQ0 6874 aaKnown RBP3.18□□□□□ -1.9
Clcn3-205ENSMUST00000110302 2310046K23RikA0A0A6YVW6 87 aa3.15□□□□□ -1.9
Clcn3-205ENSMUST00000110302 Krtap4-6Q3V4B7 195 aa3.15□□□□□ -1.91
Clcn3-205ENSMUST00000110302 Mdn1A2ANY6 5589 aaKnown RBP3.14□□□□□ -1.91
Clcn3-205ENSMUST00000110302 Krtap22-2J3QNX6 67 aa3.14□□□□□ -1.91
Clcn3-205ENSMUST00000110302 A0A1Y7VJH8 109 aa3.12□□□□□ -1.91
Clcn3-205ENSMUST00000110302 Gm11564A2A4L9 201 aa3.04□□□□□ -1.92
Clcn3-205ENSMUST00000110302 Gm11595B1AQA7 289 aa3.04□□□□□ -1.92
Clcn3-205ENSMUST00000110302 Krtap4-8B1AQA8 209 aa3.04□□□□□ -1.92
Clcn3-205ENSMUST00000110302 Krtap4-9B1AQA9 244 aa2.94□□□□□ -1.94
Clcn3-205ENSMUST00000110302 Syne1Q6ZWR6 8799 aa2.92□□□□□ -1.94
Clcn3-205ENSMUST00000110302 Lce1bQ9D149 137 aa2.91□□□□□ -1.94
Clcn3-205ENSMUST00000110302 Gm10272F7CZ33 110 aa2.9□□□□□ -1.94
Clcn3-205ENSMUST00000110302 Mt4P47945 62 aa2.89□□□□□ -1.95
Clcn3-205ENSMUST00000110302 Muc16A0A140LJ72 8478 aa2.89□□□□□ -1.95
Clcn3-205ENSMUST00000110302 Krtap6-3A0A087WQL6 57 aa2.88□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms