RNA–Protein interactions for RNA: ENSMUST00000110288.8

Ebf4-203, Transcript of Transcription factor COE4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ebf4, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4-203ENSMUST00000110288 Krtap15-1Q9QZU5 150 aa12.12□□□□□ -0.47
Ebf4-203ENSMUST00000110288 Fat3Q8BNA6 4555 aa12.03□□□□□ -0.48
Ebf4-203ENSMUST00000110288 Gm19426M0QWC7 77 aa11.99□□□□□ -0.49
Ebf4-203ENSMUST00000110288 Gm5965D3Z724 196 aa11.97□□□□□ -0.49
Ebf4-203ENSMUST00000110288 Krtap3-1A2A591 98 aa11.94□□□□□ -0.5
Ebf4-203ENSMUST00000110288 Kiaa1109A2AAE1 5005 aa11.87□□□□□ -0.51
Ebf4-203ENSMUST00000110288 HydinQ80W93 5154 aa11.84□□□□□ -0.51
Ebf4-203ENSMUST00000110288 Dnah8Q91XQ0 4731 aa11.82□□□□□ -0.52
Ebf4-203ENSMUST00000110288 Herc2Q4U2R1 4836 aa11.82□□□□□ -0.52
Ebf4-203ENSMUST00000110288 Krtap7-1Q9D3I6 87 aa11.79□□□□□ -0.52
Ebf4-203ENSMUST00000110288 B930094E09RikQ8C4T2 136 aa11.79□□□□□ -0.52
Ebf4-203ENSMUST00000110288 Gm19668J3QMD1 248 aa11.78□□□□□ -0.52
Ebf4-203ENSMUST00000110288 Gm17416Q30KP4 66 aa11.6□□□□□ -0.55
Ebf4-203ENSMUST00000110288 PcloQ9QYX7 5068 aa11.59□□□□□ -0.55
Ebf4-203ENSMUST00000110288 Lrp2A2ARV4 4660 aa11.57□□□□□ -0.56
Ebf4-203ENSMUST00000110288 Fam229aB2KGE5 128 aa11.49□□□□□ -0.57
Ebf4-203ENSMUST00000110288 Gm19402J3QJV4 266 aa11.48□□□□□ -0.57
Ebf4-203ENSMUST00000110288 2310057N15RikQ9D6T8 200 aa11.47□□□□□ -0.57
Ebf4-203ENSMUST00000110288 2210017I01RikA0A0A6YVV1 95 aa11.47□□□□□ -0.57
Ebf4-203ENSMUST00000110288 BC029722A0A0N4SW31 51 aa11.43□□□□□ -0.58
Ebf4-203ENSMUST00000110288 Gm9112A2AI92 75 aa11.43□□□□□ -0.58
Ebf4-203ENSMUST00000110288 Birc6O88738 4882 aa11.41□□□□□ -0.58
Ebf4-203ENSMUST00000110288 Dnhd1D3Z2X2 4750 aa11.41□□□□□ -0.58
Ebf4-203ENSMUST00000110288 Krtap13-1Q8K198 168 aa11.24□□□□□ -0.61
Ebf4-203ENSMUST00000110288 Gm40193A0A1B0GT39 78 aa11.16□□□□□ -0.62
Ebf4-203ENSMUST00000110288 Spink7Q6IE32 76 aa11.06□□□□□ -0.64
Ebf4-203ENSMUST00000110288 Herc1E9PZP8 4859 aa11.06□□□□□ -0.64
Ebf4-203ENSMUST00000110288 Gm10318A0A1W2P728 225 aa11.02□□□□□ -0.64
Ebf4-203ENSMUST00000110288 Crct1Q6PAI5 102 aa10.95□□□□□ -0.66
Ebf4-203ENSMUST00000110288 Gm17402F6Z0L5 76 aa10.93□□□□□ -0.66
Ebf4-203ENSMUST00000110288 Krtap1-5A2A590 122 aa10.8□□□□□ -0.68
Ebf4-203ENSMUST00000110288 Sprr2a3Q4KL71 83 aa10.8□□□□□ -0.68
Ebf4-203ENSMUST00000110288 Sprr2a1Q9CQK8 83 aa10.8□□□□□ -0.68
Ebf4-203ENSMUST00000110288 Sec61bQ9CQS8 96 aaKnown RBP10.76□□□□□ -0.69
Ebf4-203ENSMUST00000110288 Camk2n1Q6QWF9 78 aa10.73□□□□□ -0.69
Ebf4-203ENSMUST00000110288 Ubr4A2AN08 5180 aa10.65□□□□□ -0.7
Ebf4-203ENSMUST00000110288 Lce1mQ9CR91 182 aa10.55□□□□□ -0.72
Ebf4-203ENSMUST00000110288 Krtap16-3Q8C1I6 86 aa10.52□□□□□ -0.73
Ebf4-203ENSMUST00000110288 Ush2AQ2QI47 5193 aa10.5□□□□□ -0.73
Ebf4-203ENSMUST00000110288 ZanO88799 5376 aa10.42□□□□□ -0.74
Ebf4-203ENSMUST00000110288 Hmcn2A2AJ76 5100 aa10.33□□□□□ -0.76
Ebf4-203ENSMUST00000110288 Krtap19-1Q925H2 87 aa10.32□□□□□ -0.76
Ebf4-203ENSMUST00000110288 Krtap19-3Q925H6 87 aa10.32□□□□□ -0.76
Ebf4-203ENSMUST00000110288 Fat4Q2PZL6 4981 aa10.31□□□□□ -0.76
Ebf4-203ENSMUST00000110288 Gm18596A0A1W2P860 280 aa10.29□□□□□ -0.76
Ebf4-203ENSMUST00000110288 4932415D10RikA0A1W2P6U8 4986 aa10.21□□□□□ -0.78
Ebf4-203ENSMUST00000110288 Tnp1P10856 55 aa10.17□□□□□ -0.78
Ebf4-203ENSMUST00000110288 Krtap1-4Q3V2D6 188 aa10.16□□□□□ -0.78
Ebf4-203ENSMUST00000110288 Krtap1-3A2A588 173 aa10.1□□□□□ -0.79
Ebf4-203ENSMUST00000110288 LorP18165 486 aa10.1□□□□□ -0.79
Ebf4-203ENSMUST00000110288 Rnf213E9Q555 5152 aaKnown RBP9.99□□□□□ -0.81
Ebf4-203ENSMUST00000110288 Gm9789Q8BIG3 52 aa9.87□□□□□ -0.83
Ebf4-203ENSMUST00000110288 Lce1jD3YUU5 139 aa9.85□□□□□ -0.83
Ebf4-203ENSMUST00000110288 Gm7735D3YX18 52 aa9.74□□□□□ -0.85
Ebf4-203ENSMUST00000110288 Prm1P02319 51 aa9.68□□□□□ -0.86
Ebf4-203ENSMUST00000110288 Krtap12-1Q9Z287 130 aa9.64□□□□□ -0.87
Ebf4-203ENSMUST00000110288 Krtap17-1A2A5X6 109 aa9.63□□□□□ -0.87
Ebf4-203ENSMUST00000110288 Krtap19-9aF8WH65 55 aa9.61□□□□□ -0.87
Ebf4-203ENSMUST00000110288 2310046K23RikA0A0A6YVW6 87 aa9.45□□□□□ -0.9
Ebf4-203ENSMUST00000110288 Krtap9-3Q3V2C1 136 aa9.4□□□□□ -0.9
Ebf4-203ENSMUST00000110288 Krtap8-1O08633 61 aa9.3□□□□□ -0.92
Ebf4-203ENSMUST00000110288 Krtap9-5A2A5X3 358 aa9.21□□□□□ -0.94
Ebf4-203ENSMUST00000110288 Lce1iQ9D6P5 149 aa9.21□□□□□ -0.94
Ebf4-203ENSMUST00000110288 Lce1hQ9D6R3 140 aa9.18□□□□□ -0.94
Ebf4-203ENSMUST00000110288 Krtap19-9bQ99NG9 58 aa9.17□□□□□ -0.94
Ebf4-203ENSMUST00000110288 Lce1a2Q9D1K4 149 aa9.17□□□□□ -0.94
Ebf4-203ENSMUST00000110288 Krtap19-2Q925I0 141 aa9.16□□□□□ -0.94
Ebf4-203ENSMUST00000110288 SspoQ8CG65 4998 aa9.14□□□□□ -0.95
Ebf4-203ENSMUST00000110288 Lce1dQ9D731 133 aa9.08□□□□□ -0.96
Ebf4-203ENSMUST00000110288 Gm10061D3Z714 54 aa9□□□□□ -0.97
Ebf4-203ENSMUST00000110288 Lce1eQ9D139 143 aa8.69□□□□□ -1.02
Ebf4-203ENSMUST00000110288 Mdn1A2ANY6 5589 aaKnown RBP8.68□□□□□ -1.02
Ebf4-203ENSMUST00000110288 Gm6358A0A087WPH4 74 aa8.64□□□□□ -1.03
Ebf4-203ENSMUST00000110288 Muc5bE9Q5I3 4800 aa8.63□□□□□ -1.03
Ebf4-203ENSMUST00000110288 Gm11569B1AQB1 180 aa8.56□□□□□ -1.04
Ebf4-203ENSMUST00000110288 Mt2P02798 61 aa8.55□□□□□ -1.04
Ebf4-203ENSMUST00000110288 4933428G20RikQ9D3X4 101 aa8.55□□□□□ -1.04
Ebf4-203ENSMUST00000110288 Gm11938Q9D3H4 131 aa8.49□□□□□ -1.05
Ebf4-203ENSMUST00000110288 Sprr2gO70558 76 aa8.47□□□□□ -1.05
Ebf4-203ENSMUST00000110288 Gm10272F7CZ33 110 aa8.25□□□□□ -1.09
Ebf4-203ENSMUST00000110288 Lce1cQ9D1C5 147 aa8.22□□□□□ -1.09
Ebf4-203ENSMUST00000110288 Sprr2dO70555 85 aa8.15□□□□□ -1.11
Ebf4-203ENSMUST00000110288 Krtap22-2J3QNX6 67 aa8.01□□□□□ -1.13
Ebf4-203ENSMUST00000110288 Gm10100J3QK64 120 aa7.99□□□□□ -1.13
Ebf4-203ENSMUST00000110288 Lce1fB9EJP6 147 aa7.93□□□□□ -1.14
Ebf4-203ENSMUST00000110288 Krtap4-6Q3V4B7 195 aa7.93□□□□□ -1.14
Ebf4-203ENSMUST00000110288 Lce1a1Q9CQH5 143 aa7.93□□□□□ -1.14
Ebf4-203ENSMUST00000110288 Lce3bQ9CQM7 98 aa7.81□□□□□ -1.16
Ebf4-203ENSMUST00000110288 Gm10142J3KMP7 120 aa7.8□□□□□ -1.16
Ebf4-203ENSMUST00000110288 Syne1Q6ZWR6 8799 aa7.78□□□□□ -1.16
Ebf4-203ENSMUST00000110288 Fsip2A2ARZ3 6995 aa7.77□□□□□ -1.17
Ebf4-203ENSMUST00000110288 Krtap4-1Q3UUY3 169 aa7.71□□□□□ -1.17
Ebf4-203ENSMUST00000110288 Krtap4-2B1AQ85 167 aa7.71□□□□□ -1.18
Ebf4-203ENSMUST00000110288 Lce1gQ9D195 139 aa7.68□□□□□ -1.18
Ebf4-203ENSMUST00000110288 Krtap31-1Q9D644 177 aa7.68□□□□□ -1.18
Ebf4-203ENSMUST00000110288 Syne2Q6ZWQ0 6874 aaKnown RBP7.65□□□□□ -1.19
Ebf4-203ENSMUST00000110288 Sprr2iO70560 76 aa7.62□□□□□ -1.19
Ebf4-203ENSMUST00000110288 Gm11562A0PK51 136 aa7.61□□□□□ -1.19
Ebf4-203ENSMUST00000110288 Lce3cQ91V05 98 aa7.6□□□□□ -1.19
Ebf4-203ENSMUST00000110288 Gm11555B1AQ89 175 aa7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms