RNA–Protein interactions for RNA: ENSMUST00000108321.1

Hps3-202, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

TSL 1 (best) BASIC

Gene Hps3, Length 3,385 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-202ENSMUST00000108321 Krtap19-5O08632 62 aa6.77□□□□□ -1.33
Hps3-202ENSMUST00000108321 HydinQ80W93 5154 aa6.74□□□□□ -1.33
Hps3-202ENSMUST00000108321 Ryr2E9Q401 4966 aaKnown RBP6.73□□□□□ -1.33
Hps3-202ENSMUST00000108321 Kiaa1109A2AAE1 5005 aa6.68□□□□□ -1.34
Hps3-202ENSMUST00000108321 Gm19426M0QWC7 77 aa6.66□□□□□ -1.34
Hps3-202ENSMUST00000108321 Herc2Q4U2R1 4836 aa6.64□□□□□ -1.35
Hps3-202ENSMUST00000108321 Ndufaf8A2AMZ4 74 aa6.61□□□□□ -1.35
Hps3-202ENSMUST00000108321 Lrp2A2ARV4 4660 aa6.61□□□□□ -1.35
Hps3-202ENSMUST00000108321 Krtap3-1A2A591 98 aa6.6□□□□□ -1.35
Hps3-202ENSMUST00000108321 2310057N15RikQ9D6T8 200 aa6.6□□□□□ -1.35
Hps3-202ENSMUST00000108321 PcloQ9QYX7 5068 aa6.52□□□□□ -1.37
Hps3-202ENSMUST00000108321 B930094E09RikQ8C4T2 136 aa6.52□□□□□ -1.37
Hps3-202ENSMUST00000108321 BC029722A0A0N4SW31 51 aa6.52□□□□□ -1.37
Hps3-202ENSMUST00000108321 Dnah8Q91XQ0 4731 aa6.51□□□□□ -1.37
Hps3-202ENSMUST00000108321 Gm17416Q30KP4 66 aa6.49□□□□□ -1.37
Hps3-202ENSMUST00000108321 Gm10318A0A1W2P728 225 aa6.48□□□□□ -1.37
Hps3-202ENSMUST00000108321 2210017I01RikA0A0A6YVV1 95 aa6.45□□□□□ -1.38
Hps3-202ENSMUST00000108321 Spink7Q6IE32 76 aa6.43□□□□□ -1.38
Hps3-202ENSMUST00000108321 Dnhd1D3Z2X2 4750 aa6.43□□□□□ -1.38
Hps3-202ENSMUST00000108321 Krtap13-1Q8K198 168 aa6.36□□□□□ -1.39
Hps3-202ENSMUST00000108321 Crct1Q6PAI5 102 aa6.35□□□□□ -1.39
Hps3-202ENSMUST00000108321 Fam229aB2KGE5 128 aa6.32□□□□□ -1.4
Hps3-202ENSMUST00000108321 Gm19402J3QJV4 266 aa6.31□□□□□ -1.4
Hps3-202ENSMUST00000108321 Gm19668J3QMD1 248 aa6.3□□□□□ -1.4
Hps3-202ENSMUST00000108321 Krtap7-1Q9D3I6 87 aa6.29□□□□□ -1.4
Hps3-202ENSMUST00000108321 Herc1E9PZP8 4859 aa6.24□□□□□ -1.41
Hps3-202ENSMUST00000108321 Birc6O88738 4882 aa6.19□□□□□ -1.42
Hps3-202ENSMUST00000108321 Sec61bQ9CQS8 96 aaKnown RBP6.16□□□□□ -1.42
Hps3-202ENSMUST00000108321 Camk2n1Q6QWF9 78 aa6.14□□□□□ -1.43
Hps3-202ENSMUST00000108321 Ubr4A2AN08 5180 aa6.11□□□□□ -1.43
Hps3-202ENSMUST00000108321 Gm9112A2AI92 75 aa6.06□□□□□ -1.44
Hps3-202ENSMUST00000108321 Gm40193A0A1B0GT39 78 aa6.05□□□□□ -1.44
Hps3-202ENSMUST00000108321 Gm17402F6Z0L5 76 aa6.04□□□□□ -1.44
Hps3-202ENSMUST00000108321 Fat4Q2PZL6 4981 aa6.01□□□□□ -1.45
Hps3-202ENSMUST00000108321 Krtap1-5A2A590 122 aa5.98□□□□□ -1.45
Hps3-202ENSMUST00000108321 Sprr2a3Q4KL71 83 aa5.97□□□□□ -1.45
Hps3-202ENSMUST00000108321 Sprr2a1Q9CQK8 83 aa5.97□□□□□ -1.45
Hps3-202ENSMUST00000108321 ZanO88799 5376 aa5.93□□□□□ -1.46
Hps3-202ENSMUST00000108321 Krtap16-3Q8C1I6 86 aa5.88□□□□□ -1.47
Hps3-202ENSMUST00000108321 Ush2AQ2QI47 5193 aa5.82□□□□□ -1.48
Hps3-202ENSMUST00000108321 4932415D10RikA0A1W2P6U8 4986 aa5.76□□□□□ -1.49
Hps3-202ENSMUST00000108321 Rnf213E9Q555 5152 aaKnown RBP5.76□□□□□ -1.49
Hps3-202ENSMUST00000108321 Krtap19-3Q925H6 87 aa5.75□□□□□ -1.49
Hps3-202ENSMUST00000108321 Krtap19-1Q925H2 87 aa5.73□□□□□ -1.49
Hps3-202ENSMUST00000108321 Hmcn2A2AJ76 5100 aa5.72□□□□□ -1.49
Hps3-202ENSMUST00000108321 LorP18165 486 aa5.7□□□□□ -1.5
Hps3-202ENSMUST00000108321 Tnp1P10856 55 aa5.7□□□□□ -1.5
Hps3-202ENSMUST00000108321 Krtap1-4Q3V2D6 188 aa5.7□□□□□ -1.5
Hps3-202ENSMUST00000108321 Lce1mQ9CR91 182 aa5.62□□□□□ -1.51
Hps3-202ENSMUST00000108321 Gm18596A0A1W2P860 280 aa5.59□□□□□ -1.51
Hps3-202ENSMUST00000108321 Krtap1-3A2A588 173 aa5.55□□□□□ -1.52
Hps3-202ENSMUST00000108321 Lce1jD3YUU5 139 aa5.54□□□□□ -1.52
Hps3-202ENSMUST00000108321 Krtap17-1A2A5X6 109 aa5.49□□□□□ -1.53
Hps3-202ENSMUST00000108321 Krtap12-1Q9Z287 130 aa5.43□□□□□ -1.54
Hps3-202ENSMUST00000108321 Krtap19-9aF8WH65 55 aa5.41□□□□□ -1.54
Hps3-202ENSMUST00000108321 Gm9789Q8BIG3 52 aa5.24□□□□□ -1.57
Hps3-202ENSMUST00000108321 Mdn1A2ANY6 5589 aaKnown RBP5.22□□□□□ -1.57
Hps3-202ENSMUST00000108321 Krtap9-5A2A5X3 358 aa5.18□□□□□ -1.58
Hps3-202ENSMUST00000108321 Gm7735D3YX18 52 aa5.18□□□□□ -1.58
Hps3-202ENSMUST00000108321 Krtap9-3Q3V2C1 136 aa5.18□□□□□ -1.58
Hps3-202ENSMUST00000108321 Krtap19-9bQ99NG9 58 aa5.18□□□□□ -1.58
Hps3-202ENSMUST00000108321 Krtap8-1O08633 61 aa5.17□□□□□ -1.58
Hps3-202ENSMUST00000108321 Lce1iQ9D6P5 149 aa5.14□□□□□ -1.59
Hps3-202ENSMUST00000108321 Lce1a2Q9D1K4 149 aa5.12□□□□□ -1.59
Hps3-202ENSMUST00000108321 Krtap19-2Q925I0 141 aa5.11□□□□□ -1.59
Hps3-202ENSMUST00000108321 Prm1P02319 51 aa5.11□□□□□ -1.59
Hps3-202ENSMUST00000108321 2310046K23RikA0A0A6YVW6 87 aa5.1□□□□□ -1.59
Hps3-202ENSMUST00000108321 SspoQ8CG65 4998 aa5.06□□□□□ -1.6
Hps3-202ENSMUST00000108321 Lce1hQ9D6R3 140 aa5.05□□□□□ -1.6
Hps3-202ENSMUST00000108321 Gm10061D3Z714 54 aa4.88□□□□□ -1.63
Hps3-202ENSMUST00000108321 Lce1dQ9D731 133 aa4.87□□□□□ -1.63
Hps3-202ENSMUST00000108321 Mt2P02798 61 aa4.85□□□□□ -1.63
Hps3-202ENSMUST00000108321 Gm6358A0A087WPH4 74 aa4.81□□□□□ -1.64
Hps3-202ENSMUST00000108321 Muc5bE9Q5I3 4800 aa4.77□□□□□ -1.65
Hps3-202ENSMUST00000108321 4933428G20RikQ9D3X4 101 aa4.76□□□□□ -1.65
Hps3-202ENSMUST00000108321 Gm10272F7CZ33 110 aa4.7□□□□□ -1.66
Hps3-202ENSMUST00000108321 Lce1eQ9D139 143 aa4.66□□□□□ -1.66
Hps3-202ENSMUST00000108321 Gm11569B1AQB1 180 aa4.64□□□□□ -1.67
Hps3-202ENSMUST00000108321 Fsip2A2ARZ3 6995 aa4.62□□□□□ -1.67
Hps3-202ENSMUST00000108321 Sprr2gO70558 76 aa4.59□□□□□ -1.67
Hps3-202ENSMUST00000108321 Gm11938Q9D3H4 131 aa4.57□□□□□ -1.68
Hps3-202ENSMUST00000108321 Syne1Q6ZWR6 8799 aa4.53□□□□□ -1.68
Hps3-202ENSMUST00000108321 Krtap22-2J3QNX6 67 aa4.52□□□□□ -1.69
Hps3-202ENSMUST00000108321 Krtap31-1Q9D644 177 aa4.5□□□□□ -1.69
Hps3-202ENSMUST00000108321 Lce1cQ9D1C5 147 aa4.49□□□□□ -1.69
Hps3-202ENSMUST00000108321 Gm10100J3QK64 120 aa4.48□□□□□ -1.69
Hps3-202ENSMUST00000108321 Lce3bQ9CQM7 98 aa4.4□□□□□ -1.7
Hps3-202ENSMUST00000108321 Sprr2dO70555 85 aa4.4□□□□□ -1.71
Hps3-202ENSMUST00000108321 Krtap4-6Q3V4B7 195 aa4.36□□□□□ -1.71
Hps3-202ENSMUST00000108321 Syne2Q6ZWQ0 6874 aaKnown RBP4.36□□□□□ -1.71
Hps3-202ENSMUST00000108321 Gm10142J3KMP7 120 aa4.34□□□□□ -1.71
Hps3-202ENSMUST00000108321 Lce1fB9EJP6 147 aa4.32□□□□□ -1.72
Hps3-202ENSMUST00000108321 Lce1a1Q9CQH5 143 aa4.32□□□□□ -1.72
Hps3-202ENSMUST00000108321 Lce3cQ91V05 98 aa4.26□□□□□ -1.73
Hps3-202ENSMUST00000108321 Muc16A0A140LJ72 8478 aa4.25□□□□□ -1.73
Hps3-202ENSMUST00000108321 Gm38119A0A0A6YX29 146 aa4.23□□□□□ -1.73
Hps3-202ENSMUST00000108321 Lce3dE9Q8V1 98 aa4.22□□□□□ -1.73
Hps3-202ENSMUST00000108321 Krtap4-1Q3UUY3 169 aa4.2□□□□□ -1.74
Hps3-202ENSMUST00000108321 A0A1Y7VJH8 109 aa4.19□□□□□ -1.74
Hps3-202ENSMUST00000108321 Gm11562A0PK51 136 aa4.19□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms