RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Ryr2E9Q401 4966 aaKnown RBP10.89□□□□□ -0.67
Trim3-202ENSMUST00000106789 Gm21887J3QQ04 176 aa10.86□□□□□ -0.67
Trim3-202ENSMUST00000106789 Dnah8Q91XQ0 4731 aa10.85□□□□□ -0.67
Trim3-202ENSMUST00000106789 2210017I01RikA0A0A6YVV1 95 aa10.79□□□□□ -0.68
Trim3-202ENSMUST00000106789 Gm19426M0QWC7 77 aa10.71□□□□□ -0.7
Trim3-202ENSMUST00000106789 B930094E09RikQ8C4T2 136 aa10.66□□□□□ -0.7
Trim3-202ENSMUST00000106789 Ryr1E9PZQ0 5035 aa10.64□□□□□ -0.71
Trim3-202ENSMUST00000106789 BC029722A0A0N4SW31 51 aa10.56□□□□□ -0.72
Trim3-202ENSMUST00000106789 2310057N15RikQ9D6T8 200 aa10.56□□□□□ -0.72
Trim3-202ENSMUST00000106789 Krtap13-1Q8K198 168 aa10.52□□□□□ -0.73
Trim3-202ENSMUST00000106789 Kiaa1109A2AAE1 5005 aa10.37□□□□□ -0.75
Trim3-202ENSMUST00000106789 HydinQ80W93 5154 aa10.33□□□□□ -0.76
Trim3-202ENSMUST00000106789 Krtap7-1Q9D3I6 87 aa10.32□□□□□ -0.76
Trim3-202ENSMUST00000106789 Gm19402J3QJV4 266 aa10.3□□□□□ -0.76
Trim3-202ENSMUST00000106789 Herc2Q4U2R1 4836 aa10.28□□□□□ -0.76
Trim3-202ENSMUST00000106789 Ndufaf8A2AMZ4 74 aa10.26□□□□□ -0.77
Trim3-202ENSMUST00000106789 Lrp2A2ARV4 4660 aa10.25□□□□□ -0.77
Trim3-202ENSMUST00000106789 Gm17402F6Z0L5 76 aa10.23□□□□□ -0.77
Trim3-202ENSMUST00000106789 Dnhd1D3Z2X2 4750 aa10.2□□□□□ -0.78
Trim3-202ENSMUST00000106789 Krtap1-5A2A590 122 aa10.17□□□□□ -0.78
Trim3-202ENSMUST00000106789 Sec61bQ9CQS8 96 aaKnown RBP10.14□□□□□ -0.79
Trim3-202ENSMUST00000106789 Spink7Q6IE32 76 aa10.08□□□□□ -0.8
Trim3-202ENSMUST00000106789 Gm10318A0A1W2P728 225 aa10.07□□□□□ -0.8
Trim3-202ENSMUST00000106789 Fam229aB2KGE5 128 aa10.06□□□□□ -0.8
Trim3-202ENSMUST00000106789 Gm19668J3QMD1 248 aa10.02□□□□□ -0.81
Trim3-202ENSMUST00000106789 Sprr2a3Q4KL71 83 aa10.01□□□□□ -0.81
Trim3-202ENSMUST00000106789 Sprr2a1Q9CQK8 83 aa10.01□□□□□ -0.81
Trim3-202ENSMUST00000106789 Birc6O88738 4882 aa10□□□□□ -0.81
Trim3-202ENSMUST00000106789 Gm40193A0A1B0GT39 78 aa9.98□□□□□ -0.81
Trim3-202ENSMUST00000106789 Crct1Q6PAI5 102 aa9.97□□□□□ -0.81
Trim3-202ENSMUST00000106789 Prm2P07978 107 aa9.88□□□□□ -0.83
Trim3-202ENSMUST00000106789 Krtap16-3Q8C1I6 86 aa9.87□□□□□ -0.83
Trim3-202ENSMUST00000106789 PcloQ9QYX7 5068 aa9.85□□□□□ -0.83
Trim3-202ENSMUST00000106789 Camk2n1Q6QWF9 78 aa9.71□□□□□ -0.86
Trim3-202ENSMUST00000106789 Krtap19-1Q925H2 87 aa9.68□□□□□ -0.86
Trim3-202ENSMUST00000106789 Krtap19-3Q925H6 87 aa9.61□□□□□ -0.87
Trim3-202ENSMUST00000106789 Krtap1-4Q3V2D6 188 aa9.55□□□□□ -0.88
Trim3-202ENSMUST00000106789 Herc1E9PZP8 4859 aa9.39□□□□□ -0.91
Trim3-202ENSMUST00000106789 Ubr4A2AN08 5180 aa9.38□□□□□ -0.91
Trim3-202ENSMUST00000106789 ZanO88799 5376 aa9.37□□□□□ -0.91
Trim3-202ENSMUST00000106789 Gm9112A2AI92 75 aa9.31□□□□□ -0.92
Trim3-202ENSMUST00000106789 4932415D10RikA0A1W2P6U8 4986 aa9.31□□□□□ -0.92
Trim3-202ENSMUST00000106789 Fat4Q2PZL6 4981 aa9.25□□□□□ -0.93
Trim3-202ENSMUST00000106789 Lce1jD3YUU5 139 aa9.23□□□□□ -0.93
Trim3-202ENSMUST00000106789 Tnp1P10856 55 aa9.15□□□□□ -0.94
Trim3-202ENSMUST00000106789 Krtap12-1Q9Z287 130 aa9.06□□□□□ -0.96
Trim3-202ENSMUST00000106789 Krtap19-9aF8WH65 55 aa9.04□□□□□ -0.96
Trim3-202ENSMUST00000106789 Ush2AQ2QI47 5193 aa9.02□□□□□ -0.97
Trim3-202ENSMUST00000106789 Krtap1-3A2A588 173 aa9.02□□□□□ -0.97
Trim3-202ENSMUST00000106789 Hmcn2A2AJ76 5100 aa9□□□□□ -0.97
Trim3-202ENSMUST00000106789 LorP18165 486 aa8.95□□□□□ -0.98
Trim3-202ENSMUST00000106789 Rnf213E9Q555 5152 aaKnown RBP8.82□□□□□ -1
Trim3-202ENSMUST00000106789 Krtap17-1A2A5X6 109 aa8.81□□□□□ -1
Trim3-202ENSMUST00000106789 Lce1mQ9CR91 182 aa8.81□□□□□ -1
Trim3-202ENSMUST00000106789 Krtap8-1O08633 61 aa8.75□□□□□ -1.01
Trim3-202ENSMUST00000106789 Lce1iQ9D6P5 149 aa8.63□□□□□ -1.03
Trim3-202ENSMUST00000106789 2310046K23RikA0A0A6YVW6 87 aa8.62□□□□□ -1.03
Trim3-202ENSMUST00000106789 Krtap19-9bQ99NG9 58 aa8.61□□□□□ -1.03
Trim3-202ENSMUST00000106789 Lce1a2Q9D1K4 149 aa8.59□□□□□ -1.03
Trim3-202ENSMUST00000106789 Gm18596A0A1W2P860 280 aa8.52□□□□□ -1.05
Trim3-202ENSMUST00000106789 Krtap9-3Q3V2C1 136 aa8.49□□□□□ -1.05
Trim3-202ENSMUST00000106789 Gm9789Q8BIG3 52 aa8.48□□□□□ -1.05
Trim3-202ENSMUST00000106789 Krtap19-2Q925I0 141 aa8.48□□□□□ -1.05
Trim3-202ENSMUST00000106789 Krtap9-5A2A5X3 358 aa8.44□□□□□ -1.06
Trim3-202ENSMUST00000106789 Lce1hQ9D6R3 140 aa8.36□□□□□ -1.07
Trim3-202ENSMUST00000106789 SspoQ8CG65 4998 aa8.28□□□□□ -1.08
Trim3-202ENSMUST00000106789 Gm7735D3YX18 52 aa8.21□□□□□ -1.09
Trim3-202ENSMUST00000106789 Prm1P02319 51 aa8.21□□□□□ -1.1
Trim3-202ENSMUST00000106789 Mt2P02798 61 aa8□□□□□ -1.13
Trim3-202ENSMUST00000106789 Lce1dQ9D731 133 aa7.99□□□□□ -1.13
Trim3-202ENSMUST00000106789 Gm6358A0A087WPH4 74 aa7.91□□□□□ -1.14
Trim3-202ENSMUST00000106789 Muc5bE9Q5I3 4800 aa7.82□□□□□ -1.16
Trim3-202ENSMUST00000106789 Gm10061D3Z714 54 aa7.77□□□□□ -1.17
Trim3-202ENSMUST00000106789 Sprr2gO70558 76 aa7.72□□□□□ -1.17
Trim3-202ENSMUST00000106789 Lce1eQ9D139 143 aa7.7□□□□□ -1.18
Trim3-202ENSMUST00000106789 4933428G20RikQ9D3X4 101 aa7.65□□□□□ -1.19
Trim3-202ENSMUST00000106789 Gm11938Q9D3H4 131 aa7.61□□□□□ -1.19
Trim3-202ENSMUST00000106789 Gm10272F7CZ33 110 aa7.58□□□□□ -1.2
Trim3-202ENSMUST00000106789 Sprr2dO70555 85 aa7.51□□□□□ -1.21
Trim3-202ENSMUST00000106789 Krtap22-2J3QNX6 67 aa7.46□□□□□ -1.22
Trim3-202ENSMUST00000106789 Mdn1A2ANY6 5589 aaKnown RBP7.35□□□□□ -1.23
Trim3-202ENSMUST00000106789 Lce1cQ9D1C5 147 aa7.33□□□□□ -1.24
Trim3-202ENSMUST00000106789 Gm11562A0PK51 136 aa7.19□□□□□ -1.26
Trim3-202ENSMUST00000106789 Gm11569B1AQB1 180 aa7.17□□□□□ -1.26
Trim3-202ENSMUST00000106789 Gm10100J3QK64 120 aa7.11□□□□□ -1.27
Trim3-202ENSMUST00000106789 Lce3bQ9CQM7 98 aa7.06□□□□□ -1.28
Trim3-202ENSMUST00000106789 Lce1fB9EJP6 147 aa7.05□□□□□ -1.28
Trim3-202ENSMUST00000106789 Lce1a1Q9CQH5 143 aa7.05□□□□□ -1.28
Trim3-202ENSMUST00000106789 Krtap19-4Q925H7 84 aa7□□□□□ -1.29
Trim3-202ENSMUST00000106789 Gm10142J3KMP7 120 aa6.95□□□□□ -1.3
Trim3-202ENSMUST00000106789 Syne1Q6ZWR6 8799 aa6.91□□□□□ -1.3
Trim3-202ENSMUST00000106789 Lce3cQ91V05 98 aa6.78□□□□□ -1.32
Trim3-202ENSMUST00000106789 Lce3dE9Q8V1 98 aa6.73□□□□□ -1.33
Trim3-202ENSMUST00000106789 Sprr2iO70560 76 aa6.72□□□□□ -1.33
Trim3-202ENSMUST00000106789 Sprr2hO70559 108 aa6.65□□□□□ -1.35
Trim3-202ENSMUST00000106789 Lce3eF8VQJ0 98 aa6.58□□□□□ -1.36
Trim3-202ENSMUST00000106789 Lce3fQ6PAI4 98 aa6.58□□□□□ -1.36
Trim3-202ENSMUST00000106789 Krtap4-6Q3V4B7 195 aa6.57□□□□□ -1.36
Trim3-202ENSMUST00000106789 Fsip2A2ARZ3 6995 aa6.51□□□□□ -1.37
Trim3-202ENSMUST00000106789 Sprr2eO70556 76 aa6.49□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms