RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Ryr2E9Q401 4966 aaKnown RBP10,89□□□□□ -0,67
Trim3-202ENSMUST00000106789 Gm21887J3QQ04 176 aa10,86□□□□□ -0,67
Trim3-202ENSMUST00000106789 Dnah8Q91XQ0 4731 aa10,85□□□□□ -0,67
Trim3-202ENSMUST00000106789 2210017I01RikA0A0A6YVV1 95 aa10,79□□□□□ -0,68
Trim3-202ENSMUST00000106789 Gm19426M0QWC7 77 aa10,71□□□□□ -0,7
Trim3-202ENSMUST00000106789 B930094E09RikQ8C4T2 136 aa10,66□□□□□ -0,7
Trim3-202ENSMUST00000106789 Ryr1E9PZQ0 5035 aa10,64□□□□□ -0,71
Trim3-202ENSMUST00000106789 BC029722A0A0N4SW31 51 aa10,56□□□□□ -0,72
Trim3-202ENSMUST00000106789 2310057N15RikQ9D6T8 200 aa10,56□□□□□ -0,72
Trim3-202ENSMUST00000106789 Krtap13-1Q8K198 168 aa10,52□□□□□ -0,73
Trim3-202ENSMUST00000106789 Kiaa1109A2AAE1 5005 aa10,37□□□□□ -0,75
Trim3-202ENSMUST00000106789 HydinQ80W93 5154 aa10,33□□□□□ -0,76
Trim3-202ENSMUST00000106789 Krtap7-1Q9D3I6 87 aa10,32□□□□□ -0,76
Trim3-202ENSMUST00000106789 Gm19402J3QJV4 266 aa10,3□□□□□ -0,76
Trim3-202ENSMUST00000106789 Herc2Q4U2R1 4836 aa10,28□□□□□ -0,76
Trim3-202ENSMUST00000106789 Ndufaf8A2AMZ4 74 aa10,26□□□□□ -0,77
Trim3-202ENSMUST00000106789 Lrp2A2ARV4 4660 aa10,25□□□□□ -0,77
Trim3-202ENSMUST00000106789 Gm17402F6Z0L5 76 aa10,23□□□□□ -0,77
Trim3-202ENSMUST00000106789 Dnhd1D3Z2X2 4750 aa10,2□□□□□ -0,78
Trim3-202ENSMUST00000106789 Krtap1-5A2A590 122 aa10,17□□□□□ -0,78
Trim3-202ENSMUST00000106789 Sec61bQ9CQS8 96 aaKnown RBP10,14□□□□□ -0,79
Trim3-202ENSMUST00000106789 Spink7Q6IE32 76 aa10,08□□□□□ -0,8
Trim3-202ENSMUST00000106789 Gm10318A0A1W2P728 225 aa10,07□□□□□ -0,8
Trim3-202ENSMUST00000106789 Fam229aB2KGE5 128 aa10,06□□□□□ -0,8
Trim3-202ENSMUST00000106789 Gm19668J3QMD1 248 aa10,02□□□□□ -0,81
Trim3-202ENSMUST00000106789 Sprr2a3Q4KL71 83 aa10,01□□□□□ -0,81
Trim3-202ENSMUST00000106789 Sprr2a1Q9CQK8 83 aa10,01□□□□□ -0,81
Trim3-202ENSMUST00000106789 Birc6O88738 4882 aa10□□□□□ -0,81
Trim3-202ENSMUST00000106789 Gm40193A0A1B0GT39 78 aa9,98□□□□□ -0,81
Trim3-202ENSMUST00000106789 Crct1Q6PAI5 102 aa9,97□□□□□ -0,81
Trim3-202ENSMUST00000106789 Prm2P07978 107 aa9,88□□□□□ -0,83
Trim3-202ENSMUST00000106789 Krtap16-3Q8C1I6 86 aa9,87□□□□□ -0,83
Trim3-202ENSMUST00000106789 PcloQ9QYX7 5068 aa9,85□□□□□ -0,83
Trim3-202ENSMUST00000106789 Camk2n1Q6QWF9 78 aa9,71□□□□□ -0,86
Trim3-202ENSMUST00000106789 Krtap19-1Q925H2 87 aa9,68□□□□□ -0,86
Trim3-202ENSMUST00000106789 Krtap19-3Q925H6 87 aa9,61□□□□□ -0,87
Trim3-202ENSMUST00000106789 Krtap1-4Q3V2D6 188 aa9,55□□□□□ -0,88
Trim3-202ENSMUST00000106789 Herc1E9PZP8 4859 aa9,39□□□□□ -0,91
Trim3-202ENSMUST00000106789 Ubr4A2AN08 5180 aa9,38□□□□□ -0,91
Trim3-202ENSMUST00000106789 ZanO88799 5376 aa9,37□□□□□ -0,91
Trim3-202ENSMUST00000106789 Gm9112A2AI92 75 aa9,31□□□□□ -0,92
Trim3-202ENSMUST00000106789 4932415D10RikA0A1W2P6U8 4986 aa9,31□□□□□ -0,92
Trim3-202ENSMUST00000106789 Fat4Q2PZL6 4981 aa9,25□□□□□ -0,93
Trim3-202ENSMUST00000106789 Lce1jD3YUU5 139 aa9,23□□□□□ -0,93
Trim3-202ENSMUST00000106789 Tnp1P10856 55 aa9,15□□□□□ -0,94
Trim3-202ENSMUST00000106789 Krtap12-1Q9Z287 130 aa9,06□□□□□ -0,96
Trim3-202ENSMUST00000106789 Krtap19-9aF8WH65 55 aa9,04□□□□□ -0,96
Trim3-202ENSMUST00000106789 Ush2AQ2QI47 5193 aa9,02□□□□□ -0,97
Trim3-202ENSMUST00000106789 Krtap1-3A2A588 173 aa9,02□□□□□ -0,97
Trim3-202ENSMUST00000106789 Hmcn2A2AJ76 5100 aa9□□□□□ -0,97
Trim3-202ENSMUST00000106789 LorP18165 486 aa8,95□□□□□ -0,98
Trim3-202ENSMUST00000106789 Rnf213E9Q555 5152 aaKnown RBP8,82□□□□□ -1
Trim3-202ENSMUST00000106789 Krtap17-1A2A5X6 109 aa8,81□□□□□ -1
Trim3-202ENSMUST00000106789 Lce1mQ9CR91 182 aa8,81□□□□□ -1
Trim3-202ENSMUST00000106789 Krtap8-1O08633 61 aa8,75□□□□□ -1,01
Trim3-202ENSMUST00000106789 Lce1iQ9D6P5 149 aa8,63□□□□□ -1,03
Trim3-202ENSMUST00000106789 2310046K23RikA0A0A6YVW6 87 aa8,62□□□□□ -1,03
Trim3-202ENSMUST00000106789 Krtap19-9bQ99NG9 58 aa8,61□□□□□ -1,03
Trim3-202ENSMUST00000106789 Lce1a2Q9D1K4 149 aa8,59□□□□□ -1,03
Trim3-202ENSMUST00000106789 Gm18596A0A1W2P860 280 aa8,52□□□□□ -1,05
Trim3-202ENSMUST00000106789 Krtap9-3Q3V2C1 136 aa8,49□□□□□ -1,05
Trim3-202ENSMUST00000106789 Gm9789Q8BIG3 52 aa8,48□□□□□ -1,05
Trim3-202ENSMUST00000106789 Krtap19-2Q925I0 141 aa8,48□□□□□ -1,05
Trim3-202ENSMUST00000106789 Krtap9-5A2A5X3 358 aa8,44□□□□□ -1,06
Trim3-202ENSMUST00000106789 Lce1hQ9D6R3 140 aa8,36□□□□□ -1,07
Trim3-202ENSMUST00000106789 SspoQ8CG65 4998 aa8,28□□□□□ -1,08
Trim3-202ENSMUST00000106789 Gm7735D3YX18 52 aa8,21□□□□□ -1,09
Trim3-202ENSMUST00000106789 Prm1P02319 51 aa8,21□□□□□ -1,1
Trim3-202ENSMUST00000106789 Mt2P02798 61 aa8□□□□□ -1,13
Trim3-202ENSMUST00000106789 Lce1dQ9D731 133 aa7,99□□□□□ -1,13
Trim3-202ENSMUST00000106789 Gm6358A0A087WPH4 74 aa7,91□□□□□ -1,14
Trim3-202ENSMUST00000106789 Muc5bE9Q5I3 4800 aa7,82□□□□□ -1,16
Trim3-202ENSMUST00000106789 Gm10061D3Z714 54 aa7,77□□□□□ -1,17
Trim3-202ENSMUST00000106789 Sprr2gO70558 76 aa7,72□□□□□ -1,17
Trim3-202ENSMUST00000106789 Lce1eQ9D139 143 aa7,7□□□□□ -1,18
Trim3-202ENSMUST00000106789 4933428G20RikQ9D3X4 101 aa7,65□□□□□ -1,19
Trim3-202ENSMUST00000106789 Gm11938Q9D3H4 131 aa7,61□□□□□ -1,19
Trim3-202ENSMUST00000106789 Gm10272F7CZ33 110 aa7,58□□□□□ -1,2
Trim3-202ENSMUST00000106789 Sprr2dO70555 85 aa7,51□□□□□ -1,21
Trim3-202ENSMUST00000106789 Krtap22-2J3QNX6 67 aa7,46□□□□□ -1,22
Trim3-202ENSMUST00000106789 Mdn1A2ANY6 5589 aaKnown RBP7,35□□□□□ -1,23
Trim3-202ENSMUST00000106789 Lce1cQ9D1C5 147 aa7,33□□□□□ -1,24
Trim3-202ENSMUST00000106789 Gm11562A0PK51 136 aa7,19□□□□□ -1,26
Trim3-202ENSMUST00000106789 Gm11569B1AQB1 180 aa7,17□□□□□ -1,26
Trim3-202ENSMUST00000106789 Gm10100J3QK64 120 aa7,11□□□□□ -1,27
Trim3-202ENSMUST00000106789 Lce3bQ9CQM7 98 aa7,06□□□□□ -1,28
Trim3-202ENSMUST00000106789 Lce1fB9EJP6 147 aa7,05□□□□□ -1,28
Trim3-202ENSMUST00000106789 Lce1a1Q9CQH5 143 aa7,05□□□□□ -1,28
Trim3-202ENSMUST00000106789 Krtap19-4Q925H7 84 aa7□□□□□ -1,29
Trim3-202ENSMUST00000106789 Gm10142J3KMP7 120 aa6,95□□□□□ -1,3
Trim3-202ENSMUST00000106789 Syne1Q6ZWR6 8799 aa6,91□□□□□ -1,3
Trim3-202ENSMUST00000106789 Lce3cQ91V05 98 aa6,78□□□□□ -1,32
Trim3-202ENSMUST00000106789 Lce3dE9Q8V1 98 aa6,73□□□□□ -1,33
Trim3-202ENSMUST00000106789 Sprr2iO70560 76 aa6,72□□□□□ -1,33
Trim3-202ENSMUST00000106789 Sprr2hO70559 108 aa6,65□□□□□ -1,35
Trim3-202ENSMUST00000106789 Lce3eF8VQJ0 98 aa6,58□□□□□ -1,36
Trim3-202ENSMUST00000106789 Lce3fQ6PAI4 98 aa6,58□□□□□ -1,36
Trim3-202ENSMUST00000106789 Krtap4-6Q3V4B7 195 aa6,57□□□□□ -1,36
Trim3-202ENSMUST00000106789 Fsip2A2ARZ3 6995 aa6,51□□□□□ -1,37
Trim3-202ENSMUST00000106789 Sprr2eO70556 76 aa6,49□□□□□ -1,37
Retrieved 100 of 22,080 RNA–protein pairs in 54,4 ms