RNA–Protein interactions for RNA: ENSMUST00000081339.12

Rrp1b-201, Transcript of Ribosomal RNA processing protein 1 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rrp1b, Length 4,874 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1b-201ENSMUST00000081339 Mycbp2Q7TPH6 4711 aa6.54□□□□□ -1.36
Rrp1b-201ENSMUST00000081339 Dnah6E9Q0B6 4144 aa6.53□□□□□ -1.36
Rrp1b-201ENSMUST00000081339 ApobE9Q414 4505 aa6.52□□□□□ -1.37
Rrp1b-201ENSMUST00000081339 Lrp1bQ9JI18 4599 aa6.43□□□□□ -1.38
Rrp1b-201ENSMUST00000081339 LorP18165 486 aa6.41□□□□□ -1.38
Rrp1b-201ENSMUST00000081339 SacsQ9JLC8 4582 aa6.41□□□□□ -1.38
Rrp1b-201ENSMUST00000081339 Kiaa1109A2AAE1 5005 aa6.38□□□□□ -1.39
Rrp1b-201ENSMUST00000081339 Lce1mQ9CR91 182 aa6.37□□□□□ -1.39
Rrp1b-201ENSMUST00000081339 Herc2Q4U2R1 4836 aa6.37□□□□□ -1.39
Rrp1b-201ENSMUST00000081339 Dnah3Q8BW94 4083 aa6.35□□□□□ -1.39
Rrp1b-201ENSMUST00000081339 Dnah2P0C6F1 4456 aa6.35□□□□□ -1.39
Rrp1b-201ENSMUST00000081339 HydinQ80W93 5154 aa6.35□□□□□ -1.39
Rrp1b-201ENSMUST00000081339 Dnah1E9Q8T7 4250 aa6.33□□□□□ -1.4
Rrp1b-201ENSMUST00000081339 Krtap7-1Q9D3I6 87 aa6.29□□□□□ -1.4
Rrp1b-201ENSMUST00000081339 Lrp1Q91ZX7 4545 aaKnown RBP6.28□□□□□ -1.4
Rrp1b-201ENSMUST00000081339 Fat1A0A1L1SQU7 4645 aa6.27□□□□□ -1.41
Rrp1b-201ENSMUST00000081339 Sprr2a3Q4KL71 83 aa6.27□□□□□ -1.41
Rrp1b-201ENSMUST00000081339 Sprr2a1Q9CQK8 83 aa6.27□□□□□ -1.41
Rrp1b-201ENSMUST00000081339 Pkd1O08852 4293 aa6.27□□□□□ -1.41
Rrp1b-201ENSMUST00000081339 Krtap1-5A2A590 122 aa6.26□□□□□ -1.41
Rrp1b-201ENSMUST00000081339 Lrp2A2ARV4 4660 aa6.22□□□□□ -1.41
Rrp1b-201ENSMUST00000081339 4933428G20RikQ9D3X4 101 aa6.22□□□□□ -1.41
Rrp1b-201ENSMUST00000081339 Fat3Q8BNA6 4555 aa6.19□□□□□ -1.42
Rrp1b-201ENSMUST00000081339 Gm19402J3QJV4 266 aa6.18□□□□□ -1.42
Rrp1b-201ENSMUST00000081339 Ryr2E9Q401 4966 aaKnown RBP6.18□□□□□ -1.42
Rrp1b-201ENSMUST00000081339 Fras1Q80T14 4010 aa6.14□□□□□ -1.43
Rrp1b-201ENSMUST00000081339 Dnah8Q91XQ0 4731 aa6.13□□□□□ -1.43
Rrp1b-201ENSMUST00000081339 Hectd4E9Q2E4 4418 aa6.1□□□□□ -1.43
Rrp1b-201ENSMUST00000081339 Krtap1-4Q3V2D6 188 aa6.1□□□□□ -1.43
Rrp1b-201ENSMUST00000081339 Krtap19-9aF8WH65 55 aa6.07□□□□□ -1.44
Rrp1b-201ENSMUST00000081339 Dnah7cA0A087WR13 4024 aa6.04□□□□□ -1.44
Rrp1b-201ENSMUST00000081339 Dnah7aE9Q0T8 4024 aa6.01□□□□□ -1.45
Rrp1b-201ENSMUST00000081339 Krtap12-1Q9Z287 130 aa5.98□□□□□ -1.45
Rrp1b-201ENSMUST00000081339 Prm1P02319 51 aa5.98□□□□□ -1.45
Rrp1b-201ENSMUST00000081339 Krtap16-3Q8C1I6 86 aa5.96□□□□□ -1.45
Rrp1b-201ENSMUST00000081339 Krtap19-3Q925H6 87 aa5.95□□□□□ -1.46
Rrp1b-201ENSMUST00000081339 Dnhd1D3Z2X2 4750 aa5.88□□□□□ -1.47
Rrp1b-201ENSMUST00000081339 Krtap8-1O08633 61 aa5.87□□□□□ -1.47
Rrp1b-201ENSMUST00000081339 Gm7735D3YX18 52 aa5.86□□□□□ -1.47
Rrp1b-201ENSMUST00000081339 Krtap19-1Q925H2 87 aa5.85□□□□□ -1.47
Rrp1b-201ENSMUST00000081339 Fat2Q5F226 4351 aa5.83□□□□□ -1.48
Rrp1b-201ENSMUST00000081339 Krtap19-9bQ99NG9 58 aa5.82□□□□□ -1.48
Rrp1b-201ENSMUST00000081339 Birc6O88738 4882 aa5.82□□□□□ -1.48
Rrp1b-201ENSMUST00000081339 Vps13bQ80TY5 3993 aa5.81□□□□□ -1.48
Rrp1b-201ENSMUST00000081339 Abca13Q5SSE9 5034 aa5.79□□□□□ -1.48
Rrp1b-201ENSMUST00000081339 Gm6358A0A087WPH4 74 aa5.77□□□□□ -1.49
Rrp1b-201ENSMUST00000081339 PcloQ9QYX7 5068 aa5.77□□□□□ -1.49
Rrp1b-201ENSMUST00000081339 Krtap9-5A2A5X3 358 aa5.73□□□□□ -1.49
Rrp1b-201ENSMUST00000081339 Krtap1-3A2A588 173 aa5.73□□□□□ -1.49
Rrp1b-201ENSMUST00000081339 Gm9789Q8BIG3 52 aa5.73□□□□□ -1.49
Rrp1b-201ENSMUST00000081339 Sprr2kO70562 68 aa5.71□□□□□ -1.5
Rrp1b-201ENSMUST00000081339 Kmt2cQ8BRH4 4903 aa5.69□□□□□ -1.5
Rrp1b-201ENSMUST00000081339 Herc1E9PZP8 4859 aa5.61□□□□□ -1.51
Rrp1b-201ENSMUST00000081339 Pkhd1E9PZ36 4059 aa5.57□□□□□ -1.52
Rrp1b-201ENSMUST00000081339 4932415D10RikA0A1W2P6U8 4986 aa5.5□□□□□ -1.53
Rrp1b-201ENSMUST00000081339 Mdn1A2ANY6 5589 aaKnown RBP5.49□□□□□ -1.53
Rrp1b-201ENSMUST00000081339 Krtap19-2Q925I0 141 aa5.47□□□□□ -1.53
Rrp1b-201ENSMUST00000081339 Ubr4A2AN08 5180 aa5.44□□□□□ -1.54
Rrp1b-201ENSMUST00000081339 Gm10061D3Z714 54 aa5.44□□□□□ -1.54
Rrp1b-201ENSMUST00000081339 Lce1jD3YUU5 139 aa5.43□□□□□ -1.54
Rrp1b-201ENSMUST00000081339 Pkhd1l1Q80ZA4 4249 aa5.42□□□□□ -1.54
Rrp1b-201ENSMUST00000081339 2310046K23RikA0A0A6YVW6 87 aa5.39□□□□□ -1.55
Rrp1b-201ENSMUST00000081339 Mt2P02798 61 aa5.37□□□□□ -1.55
Rrp1b-201ENSMUST00000081339 Sprr2gO70558 76 aa5.34□□□□□ -1.55
Rrp1b-201ENSMUST00000081339 Gm11569B1AQB1 180 aa5.32□□□□□ -1.56
Rrp1b-201ENSMUST00000081339 Ush2AQ2QI47 5193 aa5.3□□□□□ -1.56
Rrp1b-201ENSMUST00000081339 Fat4Q2PZL6 4981 aa5.3□□□□□ -1.56
Rrp1b-201ENSMUST00000081339 Krtap22-2J3QNX6 67 aa5.28□□□□□ -1.56
Rrp1b-201ENSMUST00000081339 ZanO88799 5376 aa5.24□□□□□ -1.57
Rrp1b-201ENSMUST00000081339 Rnf213E9Q555 5152 aaKnown RBP5.24□□□□□ -1.57
Rrp1b-201ENSMUST00000081339 Gm38119A0A0A6YX29 146 aa5.18□□□□□ -1.58
Rrp1b-201ENSMUST00000081339 Lce3bQ9CQM7 98 aa5.14□□□□□ -1.59
Rrp1b-201ENSMUST00000081339 Gm10272F7CZ33 110 aa5.13□□□□□ -1.59
Rrp1b-201ENSMUST00000081339 Gm10100J3QK64 120 aa5.12□□□□□ -1.59
Rrp1b-201ENSMUST00000081339 Krtap4-2B1AQ85 167 aa5.11□□□□□ -1.59
Rrp1b-201ENSMUST00000081339 Krtap4-6Q3V4B7 195 aa5.02□□□□□ -1.61
Rrp1b-201ENSMUST00000081339 Lce1iQ9D6P5 149 aa5□□□□□ -1.61
Rrp1b-201ENSMUST00000081339 Lce1gQ9D195 139 aa4.98□□□□□ -1.61
Rrp1b-201ENSMUST00000081339 Lce3cQ91V05 98 aa4.98□□□□□ -1.61
Rrp1b-201ENSMUST00000081339 Gm10142J3KMP7 120 aa4.97□□□□□ -1.61
Rrp1b-201ENSMUST00000081339 Hmcn2A2AJ76 5100 aa4.96□□□□□ -1.62
Rrp1b-201ENSMUST00000081339 Krtap17-1A2A5X6 109 aa4.95□□□□□ -1.62
Rrp1b-201ENSMUST00000081339 Mt4P47945 62 aa4.93□□□□□ -1.62
Rrp1b-201ENSMUST00000081339 Lce1a2Q9D1K4 149 aa4.92□□□□□ -1.62
Rrp1b-201ENSMUST00000081339 Sprr2iO70560 76 aa4.85□□□□□ -1.63
Rrp1b-201ENSMUST00000081339 Lce3eF8VQJ0 98 aa4.85□□□□□ -1.63
Rrp1b-201ENSMUST00000081339 Lce3fQ6PAI4 98 aa4.85□□□□□ -1.63
Rrp1b-201ENSMUST00000081339 Krtap4-1Q3UUY3 169 aa4.84□□□□□ -1.64
Rrp1b-201ENSMUST00000081339 Krtap9-3Q3V2C1 136 aa4.82□□□□□ -1.64
Rrp1b-201ENSMUST00000081339 Muc5bE9Q5I3 4800 aa4.8□□□□□ -1.64
Rrp1b-201ENSMUST00000081339 Gm11596B1AQB0 205 aa4.8□□□□□ -1.64
Rrp1b-201ENSMUST00000081339 Fsip2A2ARZ3 6995 aa4.8□□□□□ -1.64
Rrp1b-201ENSMUST00000081339 Syne1Q6ZWR6 8799 aa4.78□□□□□ -1.64
Rrp1b-201ENSMUST00000081339 Lce1bQ9D149 137 aa4.76□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Lce3dE9Q8V1 98 aa4.75□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Gm11564A2A4L9 201 aa4.72□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Gm11563B1AQ90 168 aa4.72□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Gm11595B1AQA7 289 aa4.72□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Krtap4-8B1AQA8 209 aa4.72□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Lce1fB9EJP6 147 aa4.72□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms