RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Gm19426M0QWC7 77 aa11.57□□□□□ -0.56
Cpsf4-201ENSMUST00000070487 B930094E09RikQ8C4T2 136 aa11.53□□□□□ -0.56
Cpsf4-201ENSMUST00000070487 Lce1gQ9D195 139 aa11.53□□□□□ -0.56
Cpsf4-201ENSMUST00000070487 Cox6b2Q80ZN9 88 aa11.52□□□□□ -0.57
Cpsf4-201ENSMUST00000070487 Pcp4P63054 62 aa11.49□□□□□ -0.57
Cpsf4-201ENSMUST00000070487 Gm17606F6ZL36 78 aa11.46□□□□□ -0.57
Cpsf4-201ENSMUST00000070487 Tmem258P61166 79 aa11.44□□□□□ -0.58
Cpsf4-201ENSMUST00000070487 SptssbQ925E8 76 aa11.43□□□□□ -0.58
Cpsf4-201ENSMUST00000070487 Smlr1J3QMJ4 66 aa11.42□□□□□ -0.58
Cpsf4-201ENSMUST00000070487 Krtap19-2Q925I0 141 aa11.41□□□□□ -0.58
Cpsf4-201ENSMUST00000070487 Gm19935A0A1B0GSF9 52 aa11.39□□□□□ -0.59
Cpsf4-201ENSMUST00000070487 Krtap9-5A2A5X3 358 aa11.39□□□□□ -0.59
Cpsf4-201ENSMUST00000070487 Krtap12-1Q9Z287 130 aa11.38□□□□□ -0.59
Cpsf4-201ENSMUST00000070487 SmcpP15265 143 aa11.37□□□□□ -0.59
Cpsf4-201ENSMUST00000070487 Coa5Q99M07 74 aa11.37□□□□□ -0.59
Cpsf4-201ENSMUST00000070487 Lce1jD3YUU5 139 aa11.35□□□□□ -0.59
Cpsf4-201ENSMUST00000070487 BC029722A0A0N4SW31 51 aa11.33□□□□□ -0.6
Cpsf4-201ENSMUST00000070487 Gm20537G3UYK7 97 aa11.29□□□□□ -0.6
Cpsf4-201ENSMUST00000070487 Gm11555B1AQ89 175 aa11.28□□□□□ -0.6
Cpsf4-201ENSMUST00000070487 Smim20D3Z7Q2 69 aa11.25□□□□□ -0.61
Cpsf4-201ENSMUST00000070487 Rps28P62858 69 aaKnown RBP11.24□□□□□ -0.61
Cpsf4-201ENSMUST00000070487 Pet100P0DJE0 76 aa11.19□□□□□ -0.62
Cpsf4-201ENSMUST00000070487 Syne2Q6ZWQ0 6874 aaKnown RBP11.18□□□□□ -0.62
Cpsf4-201ENSMUST00000070487 Muc5bE9Q5I3 4800 aa11.17□□□□□ -0.62
Cpsf4-201ENSMUST00000070487 Gm10382Q3V0T5 144 aa11.17□□□□□ -0.62
Cpsf4-201ENSMUST00000070487 Pla2g10Q9QXX3 151 aa11.17□□□□□ -0.62
Cpsf4-201ENSMUST00000070487 Krtap19-9aF8WH65 55 aa11.13□□□□□ -0.63
Cpsf4-201ENSMUST00000070487 CriptO70333 101 aa11.13□□□□□ -0.63
Cpsf4-201ENSMUST00000070487 Gm11596B1AQB0 205 aa11.09□□□□□ -0.63
Cpsf4-201ENSMUST00000070487 Serp1Q9Z1W5 66 aa11.07□□□□□ -0.64
Cpsf4-201ENSMUST00000070487 Prm2P07978 107 aa11.05□□□□□ -0.64
Cpsf4-201ENSMUST00000070487 Krtap4-6Q3V4B7 195 aa11.02□□□□□ -0.64
Cpsf4-201ENSMUST00000070487 SnurfQ9WU12 71 aa11.02□□□□□ -0.65
Cpsf4-201ENSMUST00000070487 Spink7Q6IE32 76 aa10.98□□□□□ -0.65
Cpsf4-201ENSMUST00000070487 Gm20661K7N787 53 aa10.98□□□□□ -0.65
Cpsf4-201ENSMUST00000070487 Limd2Q8BGB5 128 aa10.97□□□□□ -0.65
Cpsf4-201ENSMUST00000070487 Cdc42se1Q8BHL7 80 aa10.93□□□□□ -0.66
Cpsf4-201ENSMUST00000070487 Brk1Q91VR8 75 aa10.93□□□□□ -0.66
Cpsf4-201ENSMUST00000070487 Gm6358A0A087WPH4 74 aa10.9□□□□□ -0.66
Cpsf4-201ENSMUST00000070487 Mdn1A2ANY6 5589 aaKnown RBP10.81□□□□□ -0.68
Cpsf4-201ENSMUST00000070487 Krtap4-1Q3UUY3 169 aa10.81□□□□□ -0.68
Cpsf4-201ENSMUST00000070487 H2al1aQ5M8Q2 105 aa10.76□□□□□ -0.69
Cpsf4-201ENSMUST00000070487 H2al1eQ810S6 105 aa10.76□□□□□ -0.69
Cpsf4-201ENSMUST00000070487 Gm10197F6QEY5 67 aa10.7□□□□□ -0.7
Cpsf4-201ENSMUST00000070487 Sec61gP60060 68 aa10.68□□□□□ -0.7
Cpsf4-201ENSMUST00000070487 Uqcr11Q9CPX8 56 aa10.66□□□□□ -0.7
Cpsf4-201ENSMUST00000070487 Lce1iQ9D6P5 149 aa10.65□□□□□ -0.7
Cpsf4-201ENSMUST00000070487 Phxr4P15974 95 aa10.63□□□□□ -0.71
Cpsf4-201ENSMUST00000070487 SvipQ3UZP4 77 aa10.59□□□□□ -0.71
Cpsf4-201ENSMUST00000070487 Gm11564A2A4L9 201 aa10.57□□□□□ -0.72
Cpsf4-201ENSMUST00000070487 Gm11563B1AQ90 168 aa10.57□□□□□ -0.72
Cpsf4-201ENSMUST00000070487 Gm11595B1AQA7 289 aa10.57□□□□□ -0.72
Cpsf4-201ENSMUST00000070487 Krtap4-8B1AQA8 209 aa10.57□□□□□ -0.72
Cpsf4-201ENSMUST00000070487 H2al1bA0A087WP11 105 aa10.51□□□□□ -0.73
Cpsf4-201ENSMUST00000070487 Gm9955Q8CEJ8 102 aa10.51□□□□□ -0.73
Cpsf4-201ENSMUST00000070487 Sprr2a3Q4KL71 83 aa10.47□□□□□ -0.73
Cpsf4-201ENSMUST00000070487 Sprr2a1Q9CQK8 83 aa10.47□□□□□ -0.73
Cpsf4-201ENSMUST00000070487 Gm17402F6Z0L5 76 aa10.47□□□□□ -0.73
Cpsf4-201ENSMUST00000070487 Lce1a2Q9D1K4 149 aa10.46□□□□□ -0.74
Cpsf4-201ENSMUST00000070487 Ndufb1P0DN34 57 aa10.44□□□□□ -0.74
Cpsf4-201ENSMUST00000070487 Sox16Q62247 57 aa10.44□□□□□ -0.74
Cpsf4-201ENSMUST00000070487 Mt2P02798 61 aa10.4□□□□□ -0.75
Cpsf4-201ENSMUST00000070487 Gm10337F7DEP7 55 aa10.39□□□□□ -0.75
Cpsf4-201ENSMUST00000070487 H2al1kJ3QP08 105 aa10.32□□□□□ -0.76
Cpsf4-201ENSMUST00000070487 H2al1mQ9DAD9 105 aa10.32□□□□□ -0.76
Cpsf4-201ENSMUST00000070487 Krtap4-9B1AQA9 244 aa10.25□□□□□ -0.77
Cpsf4-201ENSMUST00000070487 Krtap8-1O08633 61 aa10.2□□□□□ -0.78
Cpsf4-201ENSMUST00000070487 Mt4P47945 62 aa10.12□□□□□ -0.79
Cpsf4-201ENSMUST00000070487 Krtap9-3Q3V2C1 136 aa10.12□□□□□ -0.79
Cpsf4-201ENSMUST00000070487 4933415A04RikQ9D443 101 aa10.12□□□□□ -0.79
Cpsf4-201ENSMUST00000070487 Gm19668J3QMD1 248 aa10.11□□□□□ -0.79
Cpsf4-201ENSMUST00000070487 Fsip2A2ARZ3 6995 aa9.99□□□□□ -0.81
Cpsf4-201ENSMUST00000070487 Krtap22-2J3QNX6 67 aa9.91□□□□□ -0.82
Cpsf4-201ENSMUST00000070487 Lce1bQ9D149 137 aa9.85□□□□□ -0.83
Cpsf4-201ENSMUST00000070487 Krtap4-13Q9D7P3 165 aa9.85□□□□□ -0.83
Cpsf4-201ENSMUST00000070487 Gm21887J3QQ04 176 aa9.79□□□□□ -0.84
Cpsf4-201ENSMUST00000070487 Krtap6-3A0A087WQL6 57 aa9.76□□□□□ -0.85
Cpsf4-201ENSMUST00000070487 Sprr2kO70562 68 aa9.7□□□□□ -0.86
Cpsf4-201ENSMUST00000070487 Camk2n1Q6QWF9 78 aa9.67□□□□□ -0.86
Cpsf4-201ENSMUST00000070487 Gm3646F6S692 53 aa9.67□□□□□ -0.86
Cpsf4-201ENSMUST00000070487 Krtap19-9bQ99NG9 58 aa9.66□□□□□ -0.86
Cpsf4-201ENSMUST00000070487 Gm38119A0A0A6YX29 146 aa9.59□□□□□ -0.87
Cpsf4-201ENSMUST00000070487 Ndufs5Q99LY9 106 aa9.58□□□□□ -0.88
Cpsf4-201ENSMUST00000070487 2300003K06RikA2A4M0 262 aa9.56□□□□□ -0.88
Cpsf4-201ENSMUST00000070487 Gm3880A0A1B0GSB3 72 aa9.54□□□□□ -0.88
Cpsf4-201ENSMUST00000070487 Lce1lQ9D1G7 135 aa9.43□□□□□ -0.9
Cpsf4-201ENSMUST00000070487 Krtap4-7Q9D732 168 aa9.4□□□□□ -0.9
Cpsf4-201ENSMUST00000070487 Gm12216A0A1W2P827 62 aa9.17□□□□□ -0.94
Cpsf4-201ENSMUST00000070487 Sprr2gO70558 76 aa9.08□□□□□ -0.96
Cpsf4-201ENSMUST00000070487 Romo1P60603 79 aa8.98□□□□□ -0.97
Cpsf4-201ENSMUST00000070487 Krtap20-2E9Q0A8 60 aa8.94□□□□□ -0.98
Cpsf4-201ENSMUST00000070487 Lce1a1Q9CQH5 143 aa8.94□□□□□ -0.98
Cpsf4-201ENSMUST00000070487 Lce1hQ9D6R3 140 aa8.84□□□□□ -0.99
Cpsf4-201ENSMUST00000070487 Lce1dQ9D731 133 aa8.83□□□□□ -1
Cpsf4-201ENSMUST00000070487 A0A1Y7VJH8 109 aa8.8□□□□□ -1
Cpsf4-201ENSMUST00000070487 Krtap7-1Q9D3I6 87 aa8.8□□□□□ -1
Cpsf4-201ENSMUST00000070487 2310046K23RikA0A0A6YVW6 87 aa8.68□□□□□ -1.02
Cpsf4-201ENSMUST00000070487 Lce1eQ9D139 143 aa8.66□□□□□ -1.02
Cpsf4-201ENSMUST00000070487 Krtap5-2Q9D5Z7 189 aa8.59□□□□□ -1.03
Cpsf4-201ENSMUST00000070487 Sprr2iO70560 76 aa8.58□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms