RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Gm19426M0QWC7 77 aa11,57□□□□□ -0,56
Cpsf4-201ENSMUST00000070487 B930094E09RikQ8C4T2 136 aa11,53□□□□□ -0,56
Cpsf4-201ENSMUST00000070487 Lce1gQ9D195 139 aa11,53□□□□□ -0,56
Cpsf4-201ENSMUST00000070487 Cox6b2Q80ZN9 88 aa11,52□□□□□ -0,57
Cpsf4-201ENSMUST00000070487 Pcp4P63054 62 aa11,49□□□□□ -0,57
Cpsf4-201ENSMUST00000070487 Gm17606F6ZL36 78 aa11,46□□□□□ -0,57
Cpsf4-201ENSMUST00000070487 Tmem258P61166 79 aa11,44□□□□□ -0,58
Cpsf4-201ENSMUST00000070487 SptssbQ925E8 76 aa11,43□□□□□ -0,58
Cpsf4-201ENSMUST00000070487 Smlr1J3QMJ4 66 aa11,42□□□□□ -0,58
Cpsf4-201ENSMUST00000070487 Krtap19-2Q925I0 141 aa11,41□□□□□ -0,58
Cpsf4-201ENSMUST00000070487 Gm19935A0A1B0GSF9 52 aa11,39□□□□□ -0,59
Cpsf4-201ENSMUST00000070487 Krtap9-5A2A5X3 358 aa11,39□□□□□ -0,59
Cpsf4-201ENSMUST00000070487 Krtap12-1Q9Z287 130 aa11,38□□□□□ -0,59
Cpsf4-201ENSMUST00000070487 SmcpP15265 143 aa11,37□□□□□ -0,59
Cpsf4-201ENSMUST00000070487 Coa5Q99M07 74 aa11,37□□□□□ -0,59
Cpsf4-201ENSMUST00000070487 Lce1jD3YUU5 139 aa11,35□□□□□ -0,59
Cpsf4-201ENSMUST00000070487 BC029722A0A0N4SW31 51 aa11,33□□□□□ -0,6
Cpsf4-201ENSMUST00000070487 Gm20537G3UYK7 97 aa11,29□□□□□ -0,6
Cpsf4-201ENSMUST00000070487 Gm11555B1AQ89 175 aa11,28□□□□□ -0,6
Cpsf4-201ENSMUST00000070487 Smim20D3Z7Q2 69 aa11,25□□□□□ -0,61
Cpsf4-201ENSMUST00000070487 Rps28P62858 69 aaKnown RBP11,24□□□□□ -0,61
Cpsf4-201ENSMUST00000070487 Pet100P0DJE0 76 aa11,19□□□□□ -0,62
Cpsf4-201ENSMUST00000070487 Syne2Q6ZWQ0 6874 aaKnown RBP11,18□□□□□ -0,62
Cpsf4-201ENSMUST00000070487 Muc5bE9Q5I3 4800 aa11,17□□□□□ -0,62
Cpsf4-201ENSMUST00000070487 Gm10382Q3V0T5 144 aa11,17□□□□□ -0,62
Cpsf4-201ENSMUST00000070487 Pla2g10Q9QXX3 151 aa11,17□□□□□ -0,62
Cpsf4-201ENSMUST00000070487 Krtap19-9aF8WH65 55 aa11,13□□□□□ -0,63
Cpsf4-201ENSMUST00000070487 CriptO70333 101 aa11,13□□□□□ -0,63
Cpsf4-201ENSMUST00000070487 Gm11596B1AQB0 205 aa11,09□□□□□ -0,63
Cpsf4-201ENSMUST00000070487 Serp1Q9Z1W5 66 aa11,07□□□□□ -0,64
Cpsf4-201ENSMUST00000070487 Prm2P07978 107 aa11,05□□□□□ -0,64
Cpsf4-201ENSMUST00000070487 Krtap4-6Q3V4B7 195 aa11,02□□□□□ -0,64
Cpsf4-201ENSMUST00000070487 SnurfQ9WU12 71 aa11,02□□□□□ -0,65
Cpsf4-201ENSMUST00000070487 Spink7Q6IE32 76 aa10,98□□□□□ -0,65
Cpsf4-201ENSMUST00000070487 Gm20661K7N787 53 aa10,98□□□□□ -0,65
Cpsf4-201ENSMUST00000070487 Limd2Q8BGB5 128 aa10,97□□□□□ -0,65
Cpsf4-201ENSMUST00000070487 Cdc42se1Q8BHL7 80 aa10,93□□□□□ -0,66
Cpsf4-201ENSMUST00000070487 Brk1Q91VR8 75 aa10,93□□□□□ -0,66
Cpsf4-201ENSMUST00000070487 Gm6358A0A087WPH4 74 aa10,9□□□□□ -0,66
Cpsf4-201ENSMUST00000070487 Mdn1A2ANY6 5589 aaKnown RBP10,81□□□□□ -0,68
Cpsf4-201ENSMUST00000070487 Krtap4-1Q3UUY3 169 aa10,81□□□□□ -0,68
Cpsf4-201ENSMUST00000070487 H2al1aQ5M8Q2 105 aa10,76□□□□□ -0,69
Cpsf4-201ENSMUST00000070487 H2al1eQ810S6 105 aa10,76□□□□□ -0,69
Cpsf4-201ENSMUST00000070487 Gm10197F6QEY5 67 aa10,7□□□□□ -0,7
Cpsf4-201ENSMUST00000070487 Sec61gP60060 68 aa10,68□□□□□ -0,7
Cpsf4-201ENSMUST00000070487 Uqcr11Q9CPX8 56 aa10,66□□□□□ -0,7
Cpsf4-201ENSMUST00000070487 Lce1iQ9D6P5 149 aa10,65□□□□□ -0,7
Cpsf4-201ENSMUST00000070487 Phxr4P15974 95 aa10,63□□□□□ -0,71
Cpsf4-201ENSMUST00000070487 SvipQ3UZP4 77 aa10,59□□□□□ -0,71
Cpsf4-201ENSMUST00000070487 Gm11564A2A4L9 201 aa10,57□□□□□ -0,72
Cpsf4-201ENSMUST00000070487 Gm11563B1AQ90 168 aa10,57□□□□□ -0,72
Cpsf4-201ENSMUST00000070487 Gm11595B1AQA7 289 aa10,57□□□□□ -0,72
Cpsf4-201ENSMUST00000070487 Krtap4-8B1AQA8 209 aa10,57□□□□□ -0,72
Cpsf4-201ENSMUST00000070487 H2al1bA0A087WP11 105 aa10,51□□□□□ -0,73
Cpsf4-201ENSMUST00000070487 Gm9955Q8CEJ8 102 aa10,51□□□□□ -0,73
Cpsf4-201ENSMUST00000070487 Sprr2a3Q4KL71 83 aa10,47□□□□□ -0,73
Cpsf4-201ENSMUST00000070487 Sprr2a1Q9CQK8 83 aa10,47□□□□□ -0,73
Cpsf4-201ENSMUST00000070487 Gm17402F6Z0L5 76 aa10,47□□□□□ -0,73
Cpsf4-201ENSMUST00000070487 Lce1a2Q9D1K4 149 aa10,46□□□□□ -0,74
Cpsf4-201ENSMUST00000070487 Ndufb1P0DN34 57 aa10,44□□□□□ -0,74
Cpsf4-201ENSMUST00000070487 Sox16Q62247 57 aa10,44□□□□□ -0,74
Cpsf4-201ENSMUST00000070487 Mt2P02798 61 aa10,4□□□□□ -0,75
Cpsf4-201ENSMUST00000070487 Gm10337F7DEP7 55 aa10,39□□□□□ -0,75
Cpsf4-201ENSMUST00000070487 H2al1kJ3QP08 105 aa10,32□□□□□ -0,76
Cpsf4-201ENSMUST00000070487 H2al1mQ9DAD9 105 aa10,32□□□□□ -0,76
Cpsf4-201ENSMUST00000070487 Krtap4-9B1AQA9 244 aa10,25□□□□□ -0,77
Cpsf4-201ENSMUST00000070487 Krtap8-1O08633 61 aa10,2□□□□□ -0,78
Cpsf4-201ENSMUST00000070487 Mt4P47945 62 aa10,12□□□□□ -0,79
Cpsf4-201ENSMUST00000070487 Krtap9-3Q3V2C1 136 aa10,12□□□□□ -0,79
Cpsf4-201ENSMUST00000070487 4933415A04RikQ9D443 101 aa10,12□□□□□ -0,79
Cpsf4-201ENSMUST00000070487 Gm19668J3QMD1 248 aa10,11□□□□□ -0,79
Cpsf4-201ENSMUST00000070487 Fsip2A2ARZ3 6995 aa9,99□□□□□ -0,81
Cpsf4-201ENSMUST00000070487 Krtap22-2J3QNX6 67 aa9,91□□□□□ -0,82
Cpsf4-201ENSMUST00000070487 Lce1bQ9D149 137 aa9,85□□□□□ -0,83
Cpsf4-201ENSMUST00000070487 Krtap4-13Q9D7P3 165 aa9,85□□□□□ -0,83
Cpsf4-201ENSMUST00000070487 Gm21887J3QQ04 176 aa9,79□□□□□ -0,84
Cpsf4-201ENSMUST00000070487 Krtap6-3A0A087WQL6 57 aa9,76□□□□□ -0,85
Cpsf4-201ENSMUST00000070487 Sprr2kO70562 68 aa9,7□□□□□ -0,86
Cpsf4-201ENSMUST00000070487 Camk2n1Q6QWF9 78 aa9,67□□□□□ -0,86
Cpsf4-201ENSMUST00000070487 Gm3646F6S692 53 aa9,67□□□□□ -0,86
Cpsf4-201ENSMUST00000070487 Krtap19-9bQ99NG9 58 aa9,66□□□□□ -0,86
Cpsf4-201ENSMUST00000070487 Gm38119A0A0A6YX29 146 aa9,59□□□□□ -0,87
Cpsf4-201ENSMUST00000070487 Ndufs5Q99LY9 106 aa9,58□□□□□ -0,88
Cpsf4-201ENSMUST00000070487 2300003K06RikA2A4M0 262 aa9,56□□□□□ -0,88
Cpsf4-201ENSMUST00000070487 Gm3880A0A1B0GSB3 72 aa9,54□□□□□ -0,88
Cpsf4-201ENSMUST00000070487 Lce1lQ9D1G7 135 aa9,43□□□□□ -0,9
Cpsf4-201ENSMUST00000070487 Krtap4-7Q9D732 168 aa9,4□□□□□ -0,9
Cpsf4-201ENSMUST00000070487 Gm12216A0A1W2P827 62 aa9,17□□□□□ -0,94
Cpsf4-201ENSMUST00000070487 Sprr2gO70558 76 aa9,08□□□□□ -0,96
Cpsf4-201ENSMUST00000070487 Romo1P60603 79 aa8,98□□□□□ -0,97
Cpsf4-201ENSMUST00000070487 Krtap20-2E9Q0A8 60 aa8,94□□□□□ -0,98
Cpsf4-201ENSMUST00000070487 Lce1a1Q9CQH5 143 aa8,94□□□□□ -0,98
Cpsf4-201ENSMUST00000070487 Lce1hQ9D6R3 140 aa8,84□□□□□ -0,99
Cpsf4-201ENSMUST00000070487 Lce1dQ9D731 133 aa8,83□□□□□ -1
Cpsf4-201ENSMUST00000070487 A0A1Y7VJH8 109 aa8,8□□□□□ -1
Cpsf4-201ENSMUST00000070487 Krtap7-1Q9D3I6 87 aa8,8□□□□□ -1
Cpsf4-201ENSMUST00000070487 2310046K23RikA0A0A6YVW6 87 aa8,68□□□□□ -1,02
Cpsf4-201ENSMUST00000070487 Lce1eQ9D139 143 aa8,66□□□□□ -1,02
Cpsf4-201ENSMUST00000070487 Krtap5-2Q9D5Z7 189 aa8,59□□□□□ -1,03
Cpsf4-201ENSMUST00000070487 Sprr2iO70560 76 aa8,58□□□□□ -1,04
Retrieved 100 of 22,080 RNA–protein pairs in 7,3 ms