RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gm21887J3QQ04 176 aa4.88□□□□□ -1.63
Ccdc40-202ENSMUST00000053440 Mp68P56379 58 aa4.88□□□□□ -1.63
Ccdc40-202ENSMUST00000053440 Gm17416Q30KP4 66 aa4.87□□□□□ -1.63
Ccdc40-202ENSMUST00000053440 HydinQ80W93 5154 aa4.82□□□□□ -1.64
Ccdc40-202ENSMUST00000053440 Kiaa1109A2AAE1 5005 aa4.82□□□□□ -1.64
Ccdc40-202ENSMUST00000053440 Gm20538F6Z9R1 75 aa4.82□□□□□ -1.64
Ccdc40-202ENSMUST00000053440 2210017I01RikA0A0A6YVV1 95 aa4.81□□□□□ -1.64
Ccdc40-202ENSMUST00000053440 2310057N15RikQ9D6T8 200 aa4.8□□□□□ -1.64
Ccdc40-202ENSMUST00000053440 Gm19426M0QWC7 77 aa4.79□□□□□ -1.64
Ccdc40-202ENSMUST00000053440 Herc2Q4U2R1 4836 aa4.77□□□□□ -1.65
Ccdc40-202ENSMUST00000053440 Lrp2A2ARV4 4660 aa4.76□□□□□ -1.65
Ccdc40-202ENSMUST00000053440 B930094E09RikQ8C4T2 136 aa4.76□□□□□ -1.65
Ccdc40-202ENSMUST00000053440 Krtap13-1Q8K198 168 aa4.73□□□□□ -1.65
Ccdc40-202ENSMUST00000053440 BC029722A0A0N4SW31 51 aa4.73□□□□□ -1.65
Ccdc40-202ENSMUST00000053440 Dnhd1D3Z2X2 4750 aa4.68□□□□□ -1.66
Ccdc40-202ENSMUST00000053440 Gm10318A0A1W2P728 225 aa4.64□□□□□ -1.67
Ccdc40-202ENSMUST00000053440 Gm19402J3QJV4 266 aa4.64□□□□□ -1.67
Ccdc40-202ENSMUST00000053440 PcloQ9QYX7 5068 aa4.6□□□□□ -1.67
Ccdc40-202ENSMUST00000053440 Birc6O88738 4882 aa4.6□□□□□ -1.67
Ccdc40-202ENSMUST00000053440 Crct1Q6PAI5 102 aa4.59□□□□□ -1.68
Ccdc40-202ENSMUST00000053440 Krtap7-1Q9D3I6 87 aa4.58□□□□□ -1.68
Ccdc40-202ENSMUST00000053440 Ndufaf8A2AMZ4 74 aa4.57□□□□□ -1.68
Ccdc40-202ENSMUST00000053440 Spink7Q6IE32 76 aa4.56□□□□□ -1.68
Ccdc40-202ENSMUST00000053440 Sec61bQ9CQS8 96 aaKnown RBP4.55□□□□□ -1.68
Ccdc40-202ENSMUST00000053440 Krtap1-5A2A590 122 aa4.54□□□□□ -1.68
Ccdc40-202ENSMUST00000053440 Prm2P07978 107 aa4.54□□□□□ -1.68
Ccdc40-202ENSMUST00000053440 Gm17402F6Z0L5 76 aa4.51□□□□□ -1.69
Ccdc40-202ENSMUST00000053440 Gm19668J3QMD1 248 aa4.5□□□□□ -1.69
Ccdc40-202ENSMUST00000053440 Fam229aB2KGE5 128 aa4.47□□□□□ -1.69
Ccdc40-202ENSMUST00000053440 Sprr2a3Q4KL71 83 aa4.46□□□□□ -1.7
Ccdc40-202ENSMUST00000053440 Sprr2a1Q9CQK8 83 aa4.46□□□□□ -1.7
Ccdc40-202ENSMUST00000053440 Krtap16-3Q8C1I6 86 aa4.45□□□□□ -1.7
Ccdc40-202ENSMUST00000053440 Herc1E9PZP8 4859 aa4.4□□□□□ -1.71
Ccdc40-202ENSMUST00000053440 Gm40193A0A1B0GT39 78 aa4.38□□□□□ -1.71
Ccdc40-202ENSMUST00000053440 Ubr4A2AN08 5180 aa4.37□□□□□ -1.71
Ccdc40-202ENSMUST00000053440 Krtap19-1Q925H2 87 aa4.36□□□□□ -1.71
Ccdc40-202ENSMUST00000053440 Camk2n1Q6QWF9 78 aa4.36□□□□□ -1.71
Ccdc40-202ENSMUST00000053440 Krtap19-3Q925H6 87 aa4.34□□□□□ -1.71
Ccdc40-202ENSMUST00000053440 ZanO88799 5376 aa4.33□□□□□ -1.72
Ccdc40-202ENSMUST00000053440 Fat4Q2PZL6 4981 aa4.32□□□□□ -1.72
Ccdc40-202ENSMUST00000053440 Krtap1-4Q3V2D6 188 aa4.29□□□□□ -1.72
Ccdc40-202ENSMUST00000053440 4932415D10RikA0A1W2P6U8 4986 aa4.29□□□□□ -1.72
Ccdc40-202ENSMUST00000053440 Ush2AQ2QI47 5193 aa4.19□□□□□ -1.74
Ccdc40-202ENSMUST00000053440 Lce1jD3YUU5 139 aa4.18□□□□□ -1.74
Ccdc40-202ENSMUST00000053440 Hmcn2A2AJ76 5100 aa4.17□□□□□ -1.74
Ccdc40-202ENSMUST00000053440 Gm9112A2AI92 75 aa4.15□□□□□ -1.74
Ccdc40-202ENSMUST00000053440 Rnf213E9Q555 5152 aaKnown RBP4.12□□□□□ -1.75
Ccdc40-202ENSMUST00000053440 LorP18165 486 aa4.1□□□□□ -1.75
Ccdc40-202ENSMUST00000053440 Krtap1-3A2A588 173 aa4.08□□□□□ -1.76
Ccdc40-202ENSMUST00000053440 Krtap12-1Q9Z287 130 aa4.08□□□□□ -1.76
Ccdc40-202ENSMUST00000053440 Tnp1P10856 55 aa4.07□□□□□ -1.76
Ccdc40-202ENSMUST00000053440 Krtap19-9aF8WH65 55 aa4.06□□□□□ -1.76
Ccdc40-202ENSMUST00000053440 Krtap17-1A2A5X6 109 aa4.03□□□□□ -1.76
Ccdc40-202ENSMUST00000053440 Lce1mQ9CR91 182 aa4.01□□□□□ -1.77
Ccdc40-202ENSMUST00000053440 Lce1iQ9D6P5 149 aa3.9□□□□□ -1.79
Ccdc40-202ENSMUST00000053440 Krtap8-1O08633 61 aa3.89□□□□□ -1.79
Ccdc40-202ENSMUST00000053440 Lce1a2Q9D1K4 149 aa3.88□□□□□ -1.79
Ccdc40-202ENSMUST00000053440 Gm18596A0A1W2P860 280 aa3.87□□□□□ -1.79
Ccdc40-202ENSMUST00000053440 Krtap19-9bQ99NG9 58 aa3.84□□□□□ -1.79
Ccdc40-202ENSMUST00000053440 Krtap9-3Q3V2C1 136 aa3.84□□□□□ -1.79
Ccdc40-202ENSMUST00000053440 Gm9789Q8BIG3 52 aa3.84□□□□□ -1.8
Ccdc40-202ENSMUST00000053440 Krtap19-2Q925I0 141 aa3.83□□□□□ -1.8
Ccdc40-202ENSMUST00000053440 Krtap9-5A2A5X3 358 aa3.83□□□□□ -1.8
Ccdc40-202ENSMUST00000053440 2310046K23RikA0A0A6YVW6 87 aa3.81□□□□□ -1.8
Ccdc40-202ENSMUST00000053440 SspoQ8CG65 4998 aa3.78□□□□□ -1.81
Ccdc40-202ENSMUST00000053440 Lce1hQ9D6R3 140 aa3.77□□□□□ -1.81
Ccdc40-202ENSMUST00000053440 Gm7735D3YX18 52 aa3.73□□□□□ -1.81
Ccdc40-202ENSMUST00000053440 Prm1P02319 51 aa3.71□□□□□ -1.82
Ccdc40-202ENSMUST00000053440 Mt2P02798 61 aa3.62□□□□□ -1.83
Ccdc40-202ENSMUST00000053440 Mdn1A2ANY6 5589 aaKnown RBP3.62□□□□□ -1.83
Ccdc40-202ENSMUST00000053440 Lce1dQ9D731 133 aa3.59□□□□□ -1.84
Ccdc40-202ENSMUST00000053440 Muc5bE9Q5I3 4800 aa3.59□□□□□ -1.84
Ccdc40-202ENSMUST00000053440 Gm6358A0A087WPH4 74 aa3.58□□□□□ -1.84
Ccdc40-202ENSMUST00000053440 Gm10061D3Z714 54 aa3.53□□□□□ -1.84
Ccdc40-202ENSMUST00000053440 Muc16A0A140LJ72 8478 aa3.48□□□□□ -1.85
Ccdc40-202ENSMUST00000053440 Syne1Q6ZWR6 8799 aa3.45□□□□□ -1.86
Ccdc40-202ENSMUST00000053440 Lce1eQ9D139 143 aa3.45□□□□□ -1.86
Ccdc40-202ENSMUST00000053440 Gm10272F7CZ33 110 aa3.43□□□□□ -1.86
Ccdc40-202ENSMUST00000053440 Sprr2gO70558 76 aa3.41□□□□□ -1.86
Ccdc40-202ENSMUST00000053440 Gm11938Q9D3H4 131 aa3.39□□□□□ -1.87
Ccdc40-202ENSMUST00000053440 4933428G20RikQ9D3X4 101 aa3.38□□□□□ -1.87
Ccdc40-202ENSMUST00000053440 Krtap22-2J3QNX6 67 aa3.37□□□□□ -1.87
Ccdc40-202ENSMUST00000053440 Sprr2dO70555 85 aa3.32□□□□□ -1.88
Ccdc40-202ENSMUST00000053440 Lce1cQ9D1C5 147 aa3.31□□□□□ -1.88
Ccdc40-202ENSMUST00000053440 Gm11569B1AQB1 180 aa3.28□□□□□ -1.88
Ccdc40-202ENSMUST00000053440 Fsip2A2ARZ3 6995 aa3.21□□□□□ -1.9
Ccdc40-202ENSMUST00000053440 Krtap31-1Q9D644 177 aa3.2□□□□□ -1.9
Ccdc40-202ENSMUST00000053440 Gm10100J3QK64 120 aa3.2□□□□□ -1.9
Ccdc40-202ENSMUST00000053440 Gm11562A0PK51 136 aa3.19□□□□□ -1.9
Ccdc40-202ENSMUST00000053440 Lce1fB9EJP6 147 aa3.18□□□□□ -1.9
Ccdc40-202ENSMUST00000053440 Lce1a1Q9CQH5 143 aa3.18□□□□□ -1.9
Ccdc40-202ENSMUST00000053440 Lce3bQ9CQM7 98 aa3.18□□□□□ -1.9
Ccdc40-202ENSMUST00000053440 Krtap31-2Q8CAY5 177 aa3.14□□□□□ -1.91
Ccdc40-202ENSMUST00000053440 Gm10142J3KMP7 120 aa3.12□□□□□ -1.91
Ccdc40-202ENSMUST00000053440 Krtap19-4Q925H7 84 aa3.1□□□□□ -1.91
Ccdc40-202ENSMUST00000053440 Lce3cQ91V05 98 aa3.05□□□□□ -1.92
Ccdc40-202ENSMUST00000053440 Macf1Q9QXZ0 7354 aaKnown RBP3.04□□□□□ -1.92
Ccdc40-202ENSMUST00000053440 Syne2Q6ZWQ0 6874 aaKnown RBP3.03□□□□□ -1.92
Ccdc40-202ENSMUST00000053440 Lce3dE9Q8V1 98 aa3.02□□□□□ -1.93
Ccdc40-202ENSMUST00000053440 Krtap4-6Q3V4B7 195 aa3.02□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms