RNA–Protein interactions for RNA: ENSMUST00000046095.9

Vsx1-201, Transcript of Visual system homeobox 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vsx1, Length 3,791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1-201ENSMUST00000046095 Krtap19-5O08632 62 aa6.23□□□□□ -1.41
Vsx1-201ENSMUST00000046095 Mycbp2Q7TPH6 4711 aa6.22□□□□□ -1.41
Vsx1-201ENSMUST00000046095 B930094E09RikQ8C4T2 136 aa6.2□□□□□ -1.42
Vsx1-201ENSMUST00000046095 Pkhd1l1Q80ZA4 4249 aa6.2□□□□□ -1.42
Vsx1-201ENSMUST00000046095 Gm10318A0A1W2P728 225 aa6.17□□□□□ -1.42
Vsx1-201ENSMUST00000046095 Krtap3-1A2A591 98 aa6.16□□□□□ -1.42
Vsx1-201ENSMUST00000046095 Fam229aB2KGE5 128 aa6.13□□□□□ -1.43
Vsx1-201ENSMUST00000046095 Gm17416Q30KP4 66 aa6.12□□□□□ -1.43
Vsx1-201ENSMUST00000046095 2210017I01RikA0A0A6YVV1 95 aa6.1□□□□□ -1.43
Vsx1-201ENSMUST00000046095 Ryr1E9PZQ0 5035 aa6.09□□□□□ -1.43
Vsx1-201ENSMUST00000046095 Abca13Q5SSE9 5034 aa6.09□□□□□ -1.43
Vsx1-201ENSMUST00000046095 HydinQ80W93 5154 aa6.08□□□□□ -1.44
Vsx1-201ENSMUST00000046095 Camk2n1Q6QWF9 78 aa6.07□□□□□ -1.44
Vsx1-201ENSMUST00000046095 Sec61bQ9CQS8 96 aaKnown RBP6.05□□□□□ -1.44
Vsx1-201ENSMUST00000046095 Lrp2A2ARV4 4660 aa6.04□□□□□ -1.44
Vsx1-201ENSMUST00000046095 Krtap13-1Q8K198 168 aa6.01□□□□□ -1.45
Vsx1-201ENSMUST00000046095 Crct1Q6PAI5 102 aa6□□□□□ -1.45
Vsx1-201ENSMUST00000046095 Gm9112A2AI92 75 aa5.98□□□□□ -1.45
Vsx1-201ENSMUST00000046095 Kmt2cQ8BRH4 4903 aa5.9□□□□□ -1.46
Vsx1-201ENSMUST00000046095 Kiaa1109A2AAE1 5005 aa5.9□□□□□ -1.47
Vsx1-201ENSMUST00000046095 Gm19402J3QJV4 266 aa5.87□□□□□ -1.47
Vsx1-201ENSMUST00000046095 Gm19668J3QMD1 248 aa5.86□□□□□ -1.47
Vsx1-201ENSMUST00000046095 Krtap7-1Q9D3I6 87 aa5.84□□□□□ -1.48
Vsx1-201ENSMUST00000046095 Dnah8Q91XQ0 4731 aa5.83□□□□□ -1.48
Vsx1-201ENSMUST00000046095 Gm40193A0A1B0GT39 78 aa5.79□□□□□ -1.48
Vsx1-201ENSMUST00000046095 Herc2Q4U2R1 4836 aa5.78□□□□□ -1.48
Vsx1-201ENSMUST00000046095 Ryr2E9Q401 4966 aaKnown RBP5.72□□□□□ -1.49
Vsx1-201ENSMUST00000046095 Gm17402F6Z0L5 76 aa5.71□□□□□ -1.5
Vsx1-201ENSMUST00000046095 Dnhd1D3Z2X2 4750 aa5.71□□□□□ -1.5
Vsx1-201ENSMUST00000046095 PcloQ9QYX7 5068 aa5.67□□□□□ -1.5
Vsx1-201ENSMUST00000046095 Krtap1-5A2A590 122 aa5.58□□□□□ -1.52
Vsx1-201ENSMUST00000046095 Sprr2a3Q4KL71 83 aa5.57□□□□□ -1.52
Vsx1-201ENSMUST00000046095 Sprr2a1Q9CQK8 83 aa5.57□□□□□ -1.52
Vsx1-201ENSMUST00000046095 Tnp1P10856 55 aa5.56□□□□□ -1.52
Vsx1-201ENSMUST00000046095 Ubr4A2AN08 5180 aa5.5□□□□□ -1.53
Vsx1-201ENSMUST00000046095 Fat4Q2PZL6 4981 aa5.42□□□□□ -1.54
Vsx1-201ENSMUST00000046095 Krtap16-3Q8C1I6 86 aa5.41□□□□□ -1.54
Vsx1-201ENSMUST00000046095 Herc1E9PZP8 4859 aa5.4□□□□□ -1.55
Vsx1-201ENSMUST00000046095 Krtap1-4Q3V2D6 188 aa5.36□□□□□ -1.55
Vsx1-201ENSMUST00000046095 Krtap19-3Q925H6 87 aa5.29□□□□□ -1.56
Vsx1-201ENSMUST00000046095 ZanO88799 5376 aa5.28□□□□□ -1.56
Vsx1-201ENSMUST00000046095 Krtap19-1Q925H2 87 aa5.27□□□□□ -1.57
Vsx1-201ENSMUST00000046095 Birc6O88738 4882 aa5.25□□□□□ -1.57
Vsx1-201ENSMUST00000046095 LorP18165 486 aa5.25□□□□□ -1.57
Vsx1-201ENSMUST00000046095 Ush2AQ2QI47 5193 aa5.18□□□□□ -1.58
Vsx1-201ENSMUST00000046095 Hmcn2A2AJ76 5100 aa5.16□□□□□ -1.58
Vsx1-201ENSMUST00000046095 Lce1jD3YUU5 139 aa5.14□□□□□ -1.59
Vsx1-201ENSMUST00000046095 Krtap19-9aF8WH65 55 aa5.13□□□□□ -1.59
Vsx1-201ENSMUST00000046095 Krtap12-1Q9Z287 130 aa5.13□□□□□ -1.59
Vsx1-201ENSMUST00000046095 4932415D10RikA0A1W2P6U8 4986 aa5.13□□□□□ -1.59
Vsx1-201ENSMUST00000046095 Rnf213E9Q555 5152 aaKnown RBP5.12□□□□□ -1.59
Vsx1-201ENSMUST00000046095 Krtap17-1A2A5X6 109 aa5.04□□□□□ -1.6
Vsx1-201ENSMUST00000046095 Lce1mQ9CR91 182 aa4.99□□□□□ -1.61
Vsx1-201ENSMUST00000046095 Krtap19-9bQ99NG9 58 aa4.92□□□□□ -1.62
Vsx1-201ENSMUST00000046095 Krtap1-3A2A588 173 aa4.92□□□□□ -1.62
Vsx1-201ENSMUST00000046095 Gm18596A0A1W2P860 280 aa4.87□□□□□ -1.63
Vsx1-201ENSMUST00000046095 Krtap9-5A2A5X3 358 aa4.84□□□□□ -1.64
Vsx1-201ENSMUST00000046095 Krtap8-1O08633 61 aa4.83□□□□□ -1.64
Vsx1-201ENSMUST00000046095 Krtap9-3Q3V2C1 136 aa4.79□□□□□ -1.64
Vsx1-201ENSMUST00000046095 Lce1iQ9D6P5 149 aa4.74□□□□□ -1.65
Vsx1-201ENSMUST00000046095 2310046K23RikA0A0A6YVW6 87 aa4.73□□□□□ -1.65
Vsx1-201ENSMUST00000046095 Lce1a2Q9D1K4 149 aa4.73□□□□□ -1.65
Vsx1-201ENSMUST00000046095 Mdn1A2ANY6 5589 aaKnown RBP4.72□□□□□ -1.65
Vsx1-201ENSMUST00000046095 Krtap19-2Q925I0 141 aa4.71□□□□□ -1.65
Vsx1-201ENSMUST00000046095 Prm1P02319 51 aa4.68□□□□□ -1.66
Vsx1-201ENSMUST00000046095 4933428G20RikQ9D3X4 101 aa4.67□□□□□ -1.66
Vsx1-201ENSMUST00000046095 Gm6358A0A087WPH4 74 aa4.66□□□□□ -1.66
Vsx1-201ENSMUST00000046095 Lce1hQ9D6R3 140 aa4.64□□□□□ -1.67
Vsx1-201ENSMUST00000046095 Gm7735D3YX18 52 aa4.6□□□□□ -1.67
Vsx1-201ENSMUST00000046095 SspoQ8CG65 4998 aa4.59□□□□□ -1.67
Vsx1-201ENSMUST00000046095 Mt2P02798 61 aa4.57□□□□□ -1.68
Vsx1-201ENSMUST00000046095 Syne1Q6ZWR6 8799 aa4.56□□□□□ -1.68
Vsx1-201ENSMUST00000046095 Gm9789Q8BIG3 52 aa4.54□□□□□ -1.68
Vsx1-201ENSMUST00000046095 Gm10272F7CZ33 110 aa4.5□□□□□ -1.69
Vsx1-201ENSMUST00000046095 Gm11562A0PK51 136 aa4.5□□□□□ -1.69
Vsx1-201ENSMUST00000046095 Lce1dQ9D731 133 aa4.47□□□□□ -1.69
Vsx1-201ENSMUST00000046095 Muc16A0A140LJ72 8478 aa4.42□□□□□ -1.7
Vsx1-201ENSMUST00000046095 Gm10100J3QK64 120 aa4.32□□□□□ -1.72
Vsx1-201ENSMUST00000046095 Krtap22-2J3QNX6 67 aa4.3□□□□□ -1.72
Vsx1-201ENSMUST00000046095 Gm10061D3Z714 54 aa4.29□□□□□ -1.72
Vsx1-201ENSMUST00000046095 Lce1eQ9D139 143 aa4.26□□□□□ -1.73
Vsx1-201ENSMUST00000046095 Sprr2gO70558 76 aa4.26□□□□□ -1.73
Vsx1-201ENSMUST00000046095 Lce3bQ9CQM7 98 aa4.24□□□□□ -1.73
Vsx1-201ENSMUST00000046095 Gm11938Q9D3H4 131 aa4.19□□□□□ -1.74
Vsx1-201ENSMUST00000046095 Gm10142J3KMP7 120 aa4.17□□□□□ -1.74
Vsx1-201ENSMUST00000046095 Lce1cQ9D1C5 147 aa4.15□□□□□ -1.74
Vsx1-201ENSMUST00000046095 Muc5bE9Q5I3 4800 aa4.15□□□□□ -1.75
Vsx1-201ENSMUST00000046095 Krtap31-1Q9D644 177 aa4.13□□□□□ -1.75
Vsx1-201ENSMUST00000046095 Fsip2A2ARZ3 6995 aa4.12□□□□□ -1.75
Vsx1-201ENSMUST00000046095 Lce3cQ91V05 98 aa4.1□□□□□ -1.75
Vsx1-201ENSMUST00000046095 Gm11569B1AQB1 180 aa4.05□□□□□ -1.76
Vsx1-201ENSMUST00000046095 Lce3dE9Q8V1 98 aa4.05□□□□□ -1.76
Vsx1-201ENSMUST00000046095 Sprr2dO70555 85 aa4.04□□□□□ -1.76
Vsx1-201ENSMUST00000046095 Lce3eF8VQJ0 98 aa4□□□□□ -1.77
Vsx1-201ENSMUST00000046095 Lce3fQ6PAI4 98 aa4□□□□□ -1.77
Vsx1-201ENSMUST00000046095 Lce1fB9EJP6 147 aa3.99□□□□□ -1.77
Vsx1-201ENSMUST00000046095 Lce1a1Q9CQH5 143 aa3.99□□□□□ -1.77
Vsx1-201ENSMUST00000046095 A0A1Y7VJH8 109 aa3.96□□□□□ -1.78
Vsx1-201ENSMUST00000046095 Gm38119A0A0A6YX29 146 aa3.94□□□□□ -1.78
Vsx1-201ENSMUST00000046095 Syne2Q6ZWQ0 6874 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 308.2 ms