RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Lce1mQ9CR91 182 aa9.73□□□□□ -0.85
Ccdc50-201ENSMUST00000039443 Krtap15-1Q9QZU5 150 aa9.69□□□□□ -0.86
Ccdc50-201ENSMUST00000039443 Gm20538F6Z9R1 75 aa9.68□□□□□ -0.86
Ccdc50-201ENSMUST00000039443 CriptO70333 101 aa9.68□□□□□ -0.86
Ccdc50-201ENSMUST00000039443 Mp68P56379 58 aa9.68□□□□□ -0.86
Ccdc50-201ENSMUST00000039443 Mycbp2Q7TPH6 4711 aa9.67□□□□□ -0.86
Ccdc50-201ENSMUST00000039443 Krtap3-1A2A591 98 aa9.64□□□□□ -0.87
Ccdc50-201ENSMUST00000039443 PcloQ9QYX7 5068 aa9.63□□□□□ -0.87
Ccdc50-201ENSMUST00000039443 Gm9736A0A1W2P7N1 277 aa9.61□□□□□ -0.87
Ccdc50-201ENSMUST00000039443 Gm5965D3Z724 196 aa9.58□□□□□ -0.88
Ccdc50-201ENSMUST00000039443 2210017I01RikA0A0A6YVV1 95 aa9.52□□□□□ -0.89
Ccdc50-201ENSMUST00000039443 Lrp2A2ARV4 4660 aa9.45□□□□□ -0.9
Ccdc50-201ENSMUST00000039443 Gm19426M0QWC7 77 aa9.38□□□□□ -0.91
Ccdc50-201ENSMUST00000039443 Gm18596A0A1W2P860 280 aa9.36□□□□□ -0.91
Ccdc50-201ENSMUST00000039443 B930094E09RikQ8C4T2 136 aa9.35□□□□□ -0.91
Ccdc50-201ENSMUST00000039443 Herc1E9PZP8 4859 aa9.35□□□□□ -0.91
Ccdc50-201ENSMUST00000039443 Gm21887J3QQ04 176 aa9.33□□□□□ -0.92
Ccdc50-201ENSMUST00000039443 BC029722A0A0N4SW31 51 aa9.29□□□□□ -0.92
Ccdc50-201ENSMUST00000039443 Gm17402F6Z0L5 76 aa9.23□□□□□ -0.93
Ccdc50-201ENSMUST00000039443 Krtap13-1Q8K198 168 aa9.11□□□□□ -0.95
Ccdc50-201ENSMUST00000039443 Prm1P02319 51 aa9.07□□□□□ -0.96
Ccdc50-201ENSMUST00000039443 Gm40193A0A1B0GT39 78 aa9.03□□□□□ -0.96
Ccdc50-201ENSMUST00000039443 Krtap7-1Q9D3I6 87 aa9.03□□□□□ -0.96
Ccdc50-201ENSMUST00000039443 Gm9789Q8BIG3 52 aa9□□□□□ -0.97
Ccdc50-201ENSMUST00000039443 Ush2AQ2QI47 5193 aa9□□□□□ -0.97
Ccdc50-201ENSMUST00000039443 Gm7735D3YX18 52 aa9□□□□□ -0.97
Ccdc50-201ENSMUST00000039443 Krtap1-5A2A590 122 aa8.96□□□□□ -0.98
Ccdc50-201ENSMUST00000039443 Sec61bQ9CQS8 96 aaKnown RBP8.95□□□□□ -0.98
Ccdc50-201ENSMUST00000039443 2310057N15RikQ9D6T8 200 aa8.95□□□□□ -0.98
Ccdc50-201ENSMUST00000039443 Ndufaf8A2AMZ4 74 aa8.92□□□□□ -0.98
Ccdc50-201ENSMUST00000039443 Fam229aB2KGE5 128 aa8.9□□□□□ -0.98
Ccdc50-201ENSMUST00000039443 Hmcn2A2AJ76 5100 aa8.87□□□□□ -0.99
Ccdc50-201ENSMUST00000039443 Sprr2a3Q4KL71 83 aa8.83□□□□□ -1
Ccdc50-201ENSMUST00000039443 Sprr2a1Q9CQK8 83 aa8.83□□□□□ -1
Ccdc50-201ENSMUST00000039443 Gm19402J3QJV4 266 aa8.79□□□□□ -1
Ccdc50-201ENSMUST00000039443 Ubr4A2AN08 5180 aa8.75□□□□□ -1.01
Ccdc50-201ENSMUST00000039443 4932415D10RikA0A1W2P6U8 4986 aa8.7□□□□□ -1.02
Ccdc50-201ENSMUST00000039443 Spink7Q6IE32 76 aa8.69□□□□□ -1.02
Ccdc50-201ENSMUST00000039443 Krtap1-3A2A588 173 aa8.62□□□□□ -1.03
Ccdc50-201ENSMUST00000039443 Crct1Q6PAI5 102 aa8.56□□□□□ -1.04
Ccdc50-201ENSMUST00000039443 Prm2P07978 107 aa8.51□□□□□ -1.05
Ccdc50-201ENSMUST00000039443 Krtap16-3Q8C1I6 86 aa8.51□□□□□ -1.05
Ccdc50-201ENSMUST00000039443 Gm19668J3QMD1 248 aa8.49□□□□□ -1.05
Ccdc50-201ENSMUST00000039443 Camk2n1Q6QWF9 78 aa8.49□□□□□ -1.05
Ccdc50-201ENSMUST00000039443 Krtap19-1Q925H2 87 aa8.48□□□□□ -1.05
Ccdc50-201ENSMUST00000039443 ZanO88799 5376 aa8.47□□□□□ -1.05
Ccdc50-201ENSMUST00000039443 Krtap19-3Q925H6 87 aa8.45□□□□□ -1.06
Ccdc50-201ENSMUST00000039443 LorP18165 486 aa8.37□□□□□ -1.07
Ccdc50-201ENSMUST00000039443 Fat4Q2PZL6 4981 aa8.33□□□□□ -1.08
Ccdc50-201ENSMUST00000039443 Gm10318A0A1W2P728 225 aa8.32□□□□□ -1.08
Ccdc50-201ENSMUST00000039443 Krtap1-4Q3V2D6 188 aa8.32□□□□□ -1.08
Ccdc50-201ENSMUST00000039443 Rnf213E9Q555 5152 aaKnown RBP8.29□□□□□ -1.08
Ccdc50-201ENSMUST00000039443 Gm9112A2AI92 75 aa8.14□□□□□ -1.11
Ccdc50-201ENSMUST00000039443 Tnp1P10856 55 aa8.12□□□□□ -1.11
Ccdc50-201ENSMUST00000039443 Gm10061D3Z714 54 aa8□□□□□ -1.13
Ccdc50-201ENSMUST00000039443 SspoQ8CG65 4998 aa7.94□□□□□ -1.14
Ccdc50-201ENSMUST00000039443 Krtap19-9aF8WH65 55 aa7.91□□□□□ -1.14
Ccdc50-201ENSMUST00000039443 Krtap12-1Q9Z287 130 aa7.87□□□□□ -1.15
Ccdc50-201ENSMUST00000039443 Lce1jD3YUU5 139 aa7.85□□□□□ -1.15
Ccdc50-201ENSMUST00000039443 Krtap8-1O08633 61 aa7.73□□□□□ -1.17
Ccdc50-201ENSMUST00000039443 Gm11569B1AQB1 180 aa7.71□□□□□ -1.18
Ccdc50-201ENSMUST00000039443 2310046K23RikA0A0A6YVW6 87 aa7.7□□□□□ -1.18
Ccdc50-201ENSMUST00000039443 Krtap19-9bQ99NG9 58 aa7.58□□□□□ -1.2
Ccdc50-201ENSMUST00000039443 Krtap19-2Q925I0 141 aa7.57□□□□□ -1.2
Ccdc50-201ENSMUST00000039443 Krtap9-5A2A5X3 358 aa7.54□□□□□ -1.2
Ccdc50-201ENSMUST00000039443 Krtap17-1A2A5X6 109 aa7.46□□□□□ -1.21
Ccdc50-201ENSMUST00000039443 Lce1iQ9D6P5 149 aa7.39□□□□□ -1.23
Ccdc50-201ENSMUST00000039443 Gm11562A0PK51 136 aa7.36□□□□□ -1.23
Ccdc50-201ENSMUST00000039443 Muc5bE9Q5I3 4800 aa7.36□□□□□ -1.23
Ccdc50-201ENSMUST00000039443 Lce1a2Q9D1K4 149 aa7.33□□□□□ -1.24
Ccdc50-201ENSMUST00000039443 Krtap4-2B1AQ85 167 aa7.33□□□□□ -1.24
Ccdc50-201ENSMUST00000039443 Lce1gQ9D195 139 aa7.29□□□□□ -1.24
Ccdc50-201ENSMUST00000039443 Gm6358A0A087WPH4 74 aa7.2□□□□□ -1.26
Ccdc50-201ENSMUST00000039443 Gm11555B1AQ89 175 aa7.2□□□□□ -1.26
Ccdc50-201ENSMUST00000039443 Krtap9-3Q3V2C1 136 aa7.18□□□□□ -1.26
Ccdc50-201ENSMUST00000039443 Lce1hQ9D6R3 140 aa7.14□□□□□ -1.27
Ccdc50-201ENSMUST00000039443 Krtap4-6Q3V4B7 195 aa7.05□□□□□ -1.28
Ccdc50-201ENSMUST00000039443 Gm11596B1AQB0 205 aa7.03□□□□□ -1.28
Ccdc50-201ENSMUST00000039443 Syne2Q6ZWQ0 6874 aaKnown RBP7.01□□□□□ -1.29
Ccdc50-201ENSMUST00000039443 Mdn1A2ANY6 5589 aaKnown RBP6.99□□□□□ -1.29
Ccdc50-201ENSMUST00000039443 Mt2P02798 61 aa6.93□□□□□ -1.3
Ccdc50-201ENSMUST00000039443 Krtap4-1Q3UUY3 169 aa6.92□□□□□ -1.3
Ccdc50-201ENSMUST00000039443 4933428G20RikQ9D3X4 101 aa6.87□□□□□ -1.31
Ccdc50-201ENSMUST00000039443 Sprr2gO70558 76 aa6.86□□□□□ -1.31
Ccdc50-201ENSMUST00000039443 Lce1dQ9D731 133 aa6.81□□□□□ -1.32
Ccdc50-201ENSMUST00000039443 A0A1Y7VJH8 109 aa6.75□□□□□ -1.33
Ccdc50-201ENSMUST00000039443 Gm11564A2A4L9 201 aa6.75□□□□□ -1.33
Ccdc50-201ENSMUST00000039443 Gm11563B1AQ90 168 aa6.75□□□□□ -1.33
Ccdc50-201ENSMUST00000039443 Gm11595B1AQA7 289 aa6.75□□□□□ -1.33
Ccdc50-201ENSMUST00000039443 Krtap4-8B1AQA8 209 aa6.75□□□□□ -1.33
Ccdc50-201ENSMUST00000039443 Sprr2dO70555 85 aa6.71□□□□□ -1.33
Ccdc50-201ENSMUST00000039443 Gm11938Q9D3H4 131 aa6.66□□□□□ -1.34
Ccdc50-201ENSMUST00000039443 Krtap22-2J3QNX6 67 aa6.59□□□□□ -1.35
Ccdc50-201ENSMUST00000039443 Lce1eQ9D139 143 aa6.59□□□□□ -1.35
Ccdc50-201ENSMUST00000039443 Krtap4-9B1AQA9 244 aa6.55□□□□□ -1.36
Ccdc50-201ENSMUST00000039443 Mt4P47945 62 aa6.5□□□□□ -1.37
Ccdc50-201ENSMUST00000039443 Krtap28-10A0A1Y7VP58 119 aa6.47□□□□□ -1.37
Ccdc50-201ENSMUST00000039443 Gm10272F7CZ33 110 aa6.47□□□□□ -1.37
Ccdc50-201ENSMUST00000039443 Lce1bQ9D149 137 aa6.38□□□□□ -1.39
Ccdc50-201ENSMUST00000039443 A0A1Y7VLE6 161 aa6.31□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms