RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Cox6b2Q80ZN9 88 aa5.6□□□□□ -1.51
Ptcd1-201ENSMUST00000031628 Gm10382Q3V0T5 144 aa5.57□□□□□ -1.52
Ptcd1-201ENSMUST00000031628 Sec61bQ9CQS8 96 aaKnown RBP5.56□□□□□ -1.52
Ptcd1-201ENSMUST00000031628 2310057N15RikQ9D6T8 200 aa5.55□□□□□ -1.52
Ptcd1-201ENSMUST00000031628 HydinQ80W93 5154 aa5.51□□□□□ -1.53
Ptcd1-201ENSMUST00000031628 Gm17606F6ZL36 78 aa5.49□□□□□ -1.53
Ptcd1-201ENSMUST00000031628 Lce1mQ9CR91 182 aa5.49□□□□□ -1.53
Ptcd1-201ENSMUST00000031628 Kiaa1109A2AAE1 5005 aa5.46□□□□□ -1.54
Ptcd1-201ENSMUST00000031628 Rpl37Q9D823 97 aa5.46□□□□□ -1.54
Ptcd1-201ENSMUST00000031628 Gm9955Q8CEJ8 102 aa5.45□□□□□ -1.54
Ptcd1-201ENSMUST00000031628 Herc2Q4U2R1 4836 aa5.43□□□□□ -1.54
Ptcd1-201ENSMUST00000031628 Lrp2A2ARV4 4660 aa5.4□□□□□ -1.55
Ptcd1-201ENSMUST00000031628 Dnhd1D3Z2X2 4750 aa5.4□□□□□ -1.55
Ptcd1-201ENSMUST00000031628 B930094E09RikQ8C4T2 136 aa5.39□□□□□ -1.55
Ptcd1-201ENSMUST00000031628 Birc6O88738 4882 aa5.36□□□□□ -1.55
Ptcd1-201ENSMUST00000031628 Krtap7-1Q9D3I6 87 aa5.34□□□□□ -1.55
Ptcd1-201ENSMUST00000031628 PcloQ9QYX7 5068 aa5.32□□□□□ -1.56
Ptcd1-201ENSMUST00000031628 Krtap3-1A2A591 98 aa5.3□□□□□ -1.56
Ptcd1-201ENSMUST00000031628 Gm19668J3QMD1 248 aa5.28□□□□□ -1.56
Ptcd1-201ENSMUST00000031628 Gm10318A0A1W2P728 225 aa5.26□□□□□ -1.57
Ptcd1-201ENSMUST00000031628 Gm18596A0A1W2P860 280 aa5.23□□□□□ -1.57
Ptcd1-201ENSMUST00000031628 Gm17416Q30KP4 66 aa5.23□□□□□ -1.57
Ptcd1-201ENSMUST00000031628 Fam229aB2KGE5 128 aa5.2□□□□□ -1.58
Ptcd1-201ENSMUST00000031628 2210017I01RikA0A0A6YVV1 95 aa5.18□□□□□ -1.58
Ptcd1-201ENSMUST00000031628 Crct1Q6PAI5 102 aa5.17□□□□□ -1.58
Ptcd1-201ENSMUST00000031628 Prm1P02319 51 aa5.16□□□□□ -1.58
Ptcd1-201ENSMUST00000031628 Krtap13-1Q8K198 168 aa5.16□□□□□ -1.58
Ptcd1-201ENSMUST00000031628 Gm19426M0QWC7 77 aa5.13□□□□□ -1.59
Ptcd1-201ENSMUST00000031628 Gm40193A0A1B0GT39 78 aa5.12□□□□□ -1.59
Ptcd1-201ENSMUST00000031628 BC029722A0A0N4SW31 51 aa5.1□□□□□ -1.59
Ptcd1-201ENSMUST00000031628 Krtap17-1A2A5X6 109 aa5.09□□□□□ -1.59
Ptcd1-201ENSMUST00000031628 Gm7735D3YX18 52 aa5.06□□□□□ -1.6
Ptcd1-201ENSMUST00000031628 Herc1E9PZP8 4859 aa5.05□□□□□ -1.6
Ptcd1-201ENSMUST00000031628 Gm19402J3QJV4 266 aa5.03□□□□□ -1.6
Ptcd1-201ENSMUST00000031628 Gm11562A0PK51 136 aa5.02□□□□□ -1.61
Ptcd1-201ENSMUST00000031628 Camk2n1Q6QWF9 78 aa5.01□□□□□ -1.61
Ptcd1-201ENSMUST00000031628 Spink7Q6IE32 76 aa5□□□□□ -1.61
Ptcd1-201ENSMUST00000031628 Gm9789Q8BIG3 52 aa4.98□□□□□ -1.61
Ptcd1-201ENSMUST00000031628 Ubr4A2AN08 5180 aa4.95□□□□□ -1.62
Ptcd1-201ENSMUST00000031628 Krtap1-5A2A590 122 aa4.91□□□□□ -1.62
Ptcd1-201ENSMUST00000031628 Krtap16-3Q8C1I6 86 aa4.91□□□□□ -1.62
Ptcd1-201ENSMUST00000031628 Fat4Q2PZL6 4981 aa4.91□□□□□ -1.62
Ptcd1-201ENSMUST00000031628 ZanO88799 5376 aa4.88□□□□□ -1.63
Ptcd1-201ENSMUST00000031628 Krtap19-1Q925H2 87 aa4.82□□□□□ -1.64
Ptcd1-201ENSMUST00000031628 4932415D10RikA0A1W2P6U8 4986 aa4.8□□□□□ -1.64
Ptcd1-201ENSMUST00000031628 Krtap19-3Q925H6 87 aa4.8□□□□□ -1.64
Ptcd1-201ENSMUST00000031628 Ush2AQ2QI47 5193 aa4.8□□□□□ -1.64
Ptcd1-201ENSMUST00000031628 Gm17402F6Z0L5 76 aa4.78□□□□□ -1.64
Ptcd1-201ENSMUST00000031628 Hmcn2A2AJ76 5100 aa4.77□□□□□ -1.65
Ptcd1-201ENSMUST00000031628 Sprr2a3Q4KL71 83 aa4.77□□□□□ -1.65
Ptcd1-201ENSMUST00000031628 Sprr2a1Q9CQK8 83 aa4.77□□□□□ -1.65
Ptcd1-201ENSMUST00000031628 Krtap1-3A2A588 173 aa4.7□□□□□ -1.66
Ptcd1-201ENSMUST00000031628 Krtap1-4Q3V2D6 188 aa4.68□□□□□ -1.66
Ptcd1-201ENSMUST00000031628 Rnf213E9Q555 5152 aaKnown RBP4.68□□□□□ -1.66
Ptcd1-201ENSMUST00000031628 LorP18165 486 aa4.64□□□□□ -1.67
Ptcd1-201ENSMUST00000031628 Lce1jD3YUU5 139 aa4.62□□□□□ -1.67
Ptcd1-201ENSMUST00000031628 Krtap12-1Q9Z287 130 aa4.48□□□□□ -1.69
Ptcd1-201ENSMUST00000031628 Krtap19-9aF8WH65 55 aa4.43□□□□□ -1.7
Ptcd1-201ENSMUST00000031628 Tnp1P10856 55 aa4.39□□□□□ -1.71
Ptcd1-201ENSMUST00000031628 Krtap4-2B1AQ85 167 aa4.36□□□□□ -1.71
Ptcd1-201ENSMUST00000031628 Krtap4-1Q3UUY3 169 aa4.34□□□□□ -1.72
Ptcd1-201ENSMUST00000031628 SspoQ8CG65 4998 aa4.33□□□□□ -1.72
Ptcd1-201ENSMUST00000031628 Krtap31-1Q9D644 177 aa4.31□□□□□ -1.72
Ptcd1-201ENSMUST00000031628 Lce1iQ9D6P5 149 aa4.3□□□□□ -1.72
Ptcd1-201ENSMUST00000031628 Lce1gQ9D195 139 aa4.3□□□□□ -1.72
Ptcd1-201ENSMUST00000031628 Krtap9-5A2A5X3 358 aa4.28□□□□□ -1.72
Ptcd1-201ENSMUST00000031628 Lce1a2Q9D1K4 149 aa4.28□□□□□ -1.72
Ptcd1-201ENSMUST00000031628 Gm10061D3Z714 54 aa4.27□□□□□ -1.73
Ptcd1-201ENSMUST00000031628 Krtap19-2Q925I0 141 aa4.25□□□□□ -1.73
Ptcd1-201ENSMUST00000031628 Gm11555B1AQ89 175 aa4.24□□□□□ -1.73
Ptcd1-201ENSMUST00000031628 Gm11569B1AQB1 180 aa4.23□□□□□ -1.73
Ptcd1-201ENSMUST00000031628 Krtap9-3Q3V2C1 136 aa4.2□□□□□ -1.74
Ptcd1-201ENSMUST00000031628 Muc5bE9Q5I3 4800 aa4.19□□□□□ -1.74
Ptcd1-201ENSMUST00000031628 Krtap8-1O08633 61 aa4.17□□□□□ -1.74
Ptcd1-201ENSMUST00000031628 2310046K23RikA0A0A6YVW6 87 aa4.15□□□□□ -1.74
Ptcd1-201ENSMUST00000031628 Krtap19-9bQ99NG9 58 aa4.15□□□□□ -1.75
Ptcd1-201ENSMUST00000031628 Lce1hQ9D6R3 140 aa4.1□□□□□ -1.75
Ptcd1-201ENSMUST00000031628 Mdn1A2ANY6 5589 aaKnown RBP4.09□□□□□ -1.75
Ptcd1-201ENSMUST00000031628 Gm11596B1AQB0 205 aa4.08□□□□□ -1.76
Ptcd1-201ENSMUST00000031628 Syne2Q6ZWQ0 6874 aaKnown RBP4.07□□□□□ -1.76
Ptcd1-201ENSMUST00000031628 Gm11563B1AQ90 168 aa4.03□□□□□ -1.76
Ptcd1-201ENSMUST00000031628 Krtap4-7Q9D732 168 aa4.03□□□□□ -1.76
Ptcd1-201ENSMUST00000031628 Gm6358A0A087WPH4 74 aa4.01□□□□□ -1.77
Ptcd1-201ENSMUST00000031628 Mt2P02798 61 aa4.01□□□□□ -1.77
Ptcd1-201ENSMUST00000031628 Krtap31-2Q8CAY5 177 aa3.96□□□□□ -1.77
Ptcd1-201ENSMUST00000031628 Lce1dQ9D731 133 aa3.9□□□□□ -1.78
Ptcd1-201ENSMUST00000031628 Krtap4-6Q3V4B7 195 aa3.82□□□□□ -1.8
Ptcd1-201ENSMUST00000031628 4933428G20RikQ9D3X4 101 aa3.81□□□□□ -1.8
Ptcd1-201ENSMUST00000031628 Gm10272F7CZ33 110 aa3.77□□□□□ -1.81
Ptcd1-201ENSMUST00000031628 Krtap6-3A0A087WQL6 57 aa3.76□□□□□ -1.81
Ptcd1-201ENSMUST00000031628 Gm11564A2A4L9 201 aa3.76□□□□□ -1.81
Ptcd1-201ENSMUST00000031628 Gm11595B1AQA7 289 aa3.76□□□□□ -1.81
Ptcd1-201ENSMUST00000031628 Krtap4-8B1AQA8 209 aa3.76□□□□□ -1.81
Ptcd1-201ENSMUST00000031628 Krtap22-2J3QNX6 67 aa3.72□□□□□ -1.81
Ptcd1-201ENSMUST00000031628 Lce1eQ9D139 143 aa3.71□□□□□ -1.82
Ptcd1-201ENSMUST00000031628 Gm11938Q9D3H4 131 aa3.7□□□□□ -1.82
Ptcd1-201ENSMUST00000031628 Sprr2gO70558 76 aa3.67□□□□□ -1.82
Ptcd1-201ENSMUST00000031628 Syne1Q6ZWR6 8799 aa3.62□□□□□ -1.83
Ptcd1-201ENSMUST00000031628 Sprr2iO70560 76 aa3.6□□□□□ -1.83
Ptcd1-201ENSMUST00000031628 Lce1cQ9D1C5 147 aa3.6□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms