RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Herc2Q4U2R1 4836 aa6.39□□□□□ -1.39
Rnf4-201ENSMUST00000030992 Birc6O88738 4882 aa6.39□□□□□ -1.39
Rnf4-201ENSMUST00000030992 2210017I01RikA0A0A6YVV1 95 aa6.36□□□□□ -1.39
Rnf4-201ENSMUST00000030992 HydinQ80W93 5154 aa6.33□□□□□ -1.4
Rnf4-201ENSMUST00000030992 Lrp2A2ARV4 4660 aa6.22□□□□□ -1.41
Rnf4-201ENSMUST00000030992 Krtap13-1Q8K198 168 aa6.2□□□□□ -1.42
Rnf4-201ENSMUST00000030992 Romo1P60603 79 aa6.14□□□□□ -1.43
Rnf4-201ENSMUST00000030992 2310057N15RikQ9D6T8 200 aa6.12□□□□□ -1.43
Rnf4-201ENSMUST00000030992 Gm12216A0A1W2P827 62 aa6.12□□□□□ -1.43
Rnf4-201ENSMUST00000030992 Sec61bQ9CQS8 96 aaKnown RBP6.1□□□□□ -1.43
Rnf4-201ENSMUST00000030992 Krtap1-5A2A590 122 aa6.1□□□□□ -1.43
Rnf4-201ENSMUST00000030992 BC029722A0A0N4SW31 51 aa6.09□□□□□ -1.43
Rnf4-201ENSMUST00000030992 PcloQ9QYX7 5068 aa6.08□□□□□ -1.44
Rnf4-201ENSMUST00000030992 CriptO70333 101 aa6.08□□□□□ -1.44
Rnf4-201ENSMUST00000030992 B930094E09RikQ8C4T2 136 aa6.06□□□□□ -1.44
Rnf4-201ENSMUST00000030992 Gm21887J3QQ04 176 aa5.99□□□□□ -1.45
Rnf4-201ENSMUST00000030992 Krtap16-3Q8C1I6 86 aa5.99□□□□□ -1.45
Rnf4-201ENSMUST00000030992 Gm17402F6Z0L5 76 aa5.98□□□□□ -1.45
Rnf4-201ENSMUST00000030992 Gm19426M0QWC7 77 aa5.98□□□□□ -1.45
Rnf4-201ENSMUST00000030992 Krtap19-1Q925H2 87 aa5.91□□□□□ -1.46
Rnf4-201ENSMUST00000030992 Fam229aB2KGE5 128 aa5.88□□□□□ -1.47
Rnf4-201ENSMUST00000030992 Gm19402J3QJV4 266 aa5.87□□□□□ -1.47
Rnf4-201ENSMUST00000030992 Crct1Q6PAI5 102 aa5.86□□□□□ -1.47
Rnf4-201ENSMUST00000030992 Krtap19-3Q925H6 87 aa5.85□□□□□ -1.47
Rnf4-201ENSMUST00000030992 Sprr2a3Q4KL71 83 aa5.85□□□□□ -1.47
Rnf4-201ENSMUST00000030992 Sprr2a1Q9CQK8 83 aa5.85□□□□□ -1.47
Rnf4-201ENSMUST00000030992 Herc1E9PZP8 4859 aa5.84□□□□□ -1.47
Rnf4-201ENSMUST00000030992 Gm10318A0A1W2P728 225 aa5.84□□□□□ -1.48
Rnf4-201ENSMUST00000030992 Spink7Q6IE32 76 aa5.72□□□□□ -1.49
Rnf4-201ENSMUST00000030992 Lce1mQ9CR91 182 aa5.72□□□□□ -1.49
Rnf4-201ENSMUST00000030992 Krtap7-1Q9D3I6 87 aa5.72□□□□□ -1.49
Rnf4-201ENSMUST00000030992 Krtap1-4Q3V2D6 188 aa5.7□□□□□ -1.5
Rnf4-201ENSMUST00000030992 ZanO88799 5376 aa5.68□□□□□ -1.5
Rnf4-201ENSMUST00000030992 Hmcn2A2AJ76 5100 aa5.67□□□□□ -1.5
Rnf4-201ENSMUST00000030992 4932415D10RikA0A1W2P6U8 4986 aa5.67□□□□□ -1.5
Rnf4-201ENSMUST00000030992 Mp68P56379 58 aa5.66□□□□□ -1.5
Rnf4-201ENSMUST00000030992 Ush2AQ2QI47 5193 aa5.65□□□□□ -1.5
Rnf4-201ENSMUST00000030992 Gm20538F6Z9R1 75 aa5.63□□□□□ -1.51
Rnf4-201ENSMUST00000030992 Krtap1-3A2A588 173 aa5.61□□□□□ -1.51
Rnf4-201ENSMUST00000030992 Ubr4A2AN08 5180 aa5.58□□□□□ -1.52
Rnf4-201ENSMUST00000030992 Gm40193A0A1B0GT39 78 aa5.57□□□□□ -1.52
Rnf4-201ENSMUST00000030992 Lce1jD3YUU5 139 aa5.5□□□□□ -1.53
Rnf4-201ENSMUST00000030992 Fat4Q2PZL6 4981 aa5.5□□□□□ -1.53
Rnf4-201ENSMUST00000030992 Gm9789Q8BIG3 52 aa5.48□□□□□ -1.53
Rnf4-201ENSMUST00000030992 Rnf213E9Q555 5152 aaKnown RBP5.46□□□□□ -1.54
Rnf4-201ENSMUST00000030992 Gm19668J3QMD1 248 aa5.45□□□□□ -1.54
Rnf4-201ENSMUST00000030992 Camk2n1Q6QWF9 78 aa5.45□□□□□ -1.54
Rnf4-201ENSMUST00000030992 Krtap12-1Q9Z287 130 aa5.44□□□□□ -1.54
Rnf4-201ENSMUST00000030992 LorP18165 486 aa5.44□□□□□ -1.54
Rnf4-201ENSMUST00000030992 Krtap19-9aF8WH65 55 aa5.41□□□□□ -1.54
Rnf4-201ENSMUST00000030992 Gm18596A0A1W2P860 280 aa5.37□□□□□ -1.55
Rnf4-201ENSMUST00000030992 Prm1P02319 51 aa5.37□□□□□ -1.55
Rnf4-201ENSMUST00000030992 Gm7735D3YX18 52 aa5.34□□□□□ -1.56
Rnf4-201ENSMUST00000030992 Ndufaf8A2AMZ4 74 aa5.3□□□□□ -1.56
Rnf4-201ENSMUST00000030992 Prm2P07978 107 aa5.27□□□□□ -1.57
Rnf4-201ENSMUST00000030992 SspoQ8CG65 4998 aa5.25□□□□□ -1.57
Rnf4-201ENSMUST00000030992 Krtap17-1A2A5X6 109 aa5.25□□□□□ -1.57
Rnf4-201ENSMUST00000030992 Krtap19-2Q925I0 141 aa5.17□□□□□ -1.58
Rnf4-201ENSMUST00000030992 Lce1iQ9D6P5 149 aa5.17□□□□□ -1.58
Rnf4-201ENSMUST00000030992 Krtap8-1O08633 61 aa5.17□□□□□ -1.58
Rnf4-201ENSMUST00000030992 Lce1a2Q9D1K4 149 aa5.13□□□□□ -1.59
Rnf4-201ENSMUST00000030992 Tnp1P10856 55 aa5.13□□□□□ -1.59
Rnf4-201ENSMUST00000030992 Krtap9-5A2A5X3 358 aa5.11□□□□□ -1.59
Rnf4-201ENSMUST00000030992 Krtap19-9bQ99NG9 58 aa5.06□□□□□ -1.6
Rnf4-201ENSMUST00000030992 2310046K23RikA0A0A6YVW6 87 aa4.95□□□□□ -1.62
Rnf4-201ENSMUST00000030992 Gm10061D3Z714 54 aa4.93□□□□□ -1.62
Rnf4-201ENSMUST00000030992 Krtap9-3Q3V2C1 136 aa4.9□□□□□ -1.62
Rnf4-201ENSMUST00000030992 Muc5bE9Q5I3 4800 aa4.89□□□□□ -1.63
Rnf4-201ENSMUST00000030992 Lce1hQ9D6R3 140 aa4.86□□□□□ -1.63
Rnf4-201ENSMUST00000030992 Gm6358A0A087WPH4 74 aa4.85□□□□□ -1.63
Rnf4-201ENSMUST00000030992 Mt2P02798 61 aa4.81□□□□□ -1.64
Rnf4-201ENSMUST00000030992 A0A1Y7VJH8 109 aa4.8□□□□□ -1.64
Rnf4-201ENSMUST00000030992 Gm9112A2AI92 75 aa4.7□□□□□ -1.66
Rnf4-201ENSMUST00000030992 Krtap28-10A0A1Y7VP58 119 aa4.66□□□□□ -1.66
Rnf4-201ENSMUST00000030992 Gm11569B1AQB1 180 aa4.57□□□□□ -1.68
Rnf4-201ENSMUST00000030992 Krtap22-2J3QNX6 67 aa4.51□□□□□ -1.69
Rnf4-201ENSMUST00000030992 Lce1dQ9D731 133 aa4.5□□□□□ -1.69
Rnf4-201ENSMUST00000030992 A0A1Y7VLE6 161 aa4.45□□□□□ -1.7
Rnf4-201ENSMUST00000030992 Sprr2gO70558 76 aa4.43□□□□□ -1.7
Rnf4-201ENSMUST00000030992 Gm11562A0PK51 136 aa4.42□□□□□ -1.7
Rnf4-201ENSMUST00000030992 A030005L19RikA0A1Y7VIU2 113 aa4.4□□□□□ -1.7
Rnf4-201ENSMUST00000030992 Gm7544A0A1Y7VJ58 118 aa4.39□□□□□ -1.71
Rnf4-201ENSMUST00000030992 Gm10272F7CZ33 110 aa4.38□□□□□ -1.71
Rnf4-201ENSMUST00000030992 Sprr2dO70555 85 aa4.38□□□□□ -1.71
Rnf4-201ENSMUST00000030992 Lce1eQ9D139 143 aa4.36□□□□□ -1.71
Rnf4-201ENSMUST00000030992 Krtap28-13A0A087WQP5 138 aa4.36□□□□□ -1.71
Rnf4-201ENSMUST00000030992 Mdn1A2ANY6 5589 aaKnown RBP4.33□□□□□ -1.72
Rnf4-201ENSMUST00000030992 Gm11938Q9D3H4 131 aa4.33□□□□□ -1.72
Rnf4-201ENSMUST00000030992 A030005K14RikA0A1Y7VNY1 122 aa4.28□□□□□ -1.73
Rnf4-201ENSMUST00000030992 4933428G20RikQ9D3X4 101 aa4.25□□□□□ -1.73
Rnf4-201ENSMUST00000030992 Krtap4-2B1AQ85 167 aa4.2□□□□□ -1.74
Rnf4-201ENSMUST00000030992 Lce1cQ9D1C5 147 aa4.17□□□□□ -1.74
Rnf4-201ENSMUST00000030992 Gm11555B1AQ89 175 aa4.15□□□□□ -1.75
Rnf4-201ENSMUST00000030992 Krtap4-6Q3V4B7 195 aa4.14□□□□□ -1.75
Rnf4-201ENSMUST00000030992 Krtap19-4Q925H7 84 aa4.1□□□□□ -1.75
Rnf4-201ENSMUST00000030992 Lce1gQ9D195 139 aa4.08□□□□□ -1.76
Rnf4-201ENSMUST00000030992 Krtap4-1Q3UUY3 169 aa4.06□□□□□ -1.76
Rnf4-201ENSMUST00000030992 Syne1Q6ZWR6 8799 aa4.06□□□□□ -1.76
Rnf4-201ENSMUST00000030992 Lce1fB9EJP6 147 aa4□□□□□ -1.77
Rnf4-201ENSMUST00000030992 Lce1a1Q9CQH5 143 aa4□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 78.8 ms