RNA–Protein interactions for RNA: ENSMUST00000028398.13

Ube2e3-201, Transcript of Ubiquitin-conjugating enzyme E2 E3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ube2e3, Length 2,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3-201ENSMUST00000028398 2210017I01RikA0A0A6YVV1 95 aa10.92□□□□□ -0.66
Ube2e3-201ENSMUST00000028398 CriptO70333 101 aa10.92□□□□□ -0.66
Ube2e3-201ENSMUST00000028398 Dnhd1D3Z2X2 4750 aa10.68□□□□□ -0.7
Ube2e3-201ENSMUST00000028398 B930094E09RikQ8C4T2 136 aa10.6□□□□□ -0.71
Ube2e3-201ENSMUST00000028398 Gm21887J3QQ04 176 aa10.59□□□□□ -0.71
Ube2e3-201ENSMUST00000028398 Krtap13-1Q8K198 168 aa10.57□□□□□ -0.72
Ube2e3-201ENSMUST00000028398 Gm19426M0QWC7 77 aa10.56□□□□□ -0.72
Ube2e3-201ENSMUST00000028398 BC029722A0A0N4SW31 51 aa10.55□□□□□ -0.72
Ube2e3-201ENSMUST00000028398 Mp68P56379 58 aa10.54□□□□□ -0.72
Ube2e3-201ENSMUST00000028398 Gm20538F6Z9R1 75 aa10.53□□□□□ -0.72
Ube2e3-201ENSMUST00000028398 Kiaa1109A2AAE1 5005 aa10.5□□□□□ -0.73
Ube2e3-201ENSMUST00000028398 Herc2Q4U2R1 4836 aa10.46□□□□□ -0.73
Ube2e3-201ENSMUST00000028398 2310057N15RikQ9D6T8 200 aa10.45□□□□□ -0.74
Ube2e3-201ENSMUST00000028398 Gm17402F6Z0L5 76 aa10.43□□□□□ -0.74
Ube2e3-201ENSMUST00000028398 Birc6O88738 4882 aa10.41□□□□□ -0.74
Ube2e3-201ENSMUST00000028398 Krtap1-5A2A590 122 aa10.35□□□□□ -0.75
Ube2e3-201ENSMUST00000028398 HydinQ80W93 5154 aa10.33□□□□□ -0.76
Ube2e3-201ENSMUST00000028398 Sec61bQ9CQS8 96 aaKnown RBP10.32□□□□□ -0.76
Ube2e3-201ENSMUST00000028398 Lrp2A2ARV4 4660 aa10.31□□□□□ -0.76
Ube2e3-201ENSMUST00000028398 Gm19402J3QJV4 266 aa10.18□□□□□ -0.78
Ube2e3-201ENSMUST00000028398 Krtap7-1Q9D3I6 87 aa10.18□□□□□ -0.78
Ube2e3-201ENSMUST00000028398 Sprr2a3Q4KL71 83 aa10.09□□□□□ -0.79
Ube2e3-201ENSMUST00000028398 Sprr2a1Q9CQK8 83 aa10.09□□□□□ -0.79
Ube2e3-201ENSMUST00000028398 Krtap16-3Q8C1I6 86 aa10.03□□□□□ -0.8
Ube2e3-201ENSMUST00000028398 Gm40193A0A1B0GT39 78 aa10.01□□□□□ -0.81
Ube2e3-201ENSMUST00000028398 PcloQ9QYX7 5068 aa10□□□□□ -0.81
Ube2e3-201ENSMUST00000028398 Fam229aB2KGE5 128 aa9.99□□□□□ -0.81
Ube2e3-201ENSMUST00000028398 Spink7Q6IE32 76 aa9.92□□□□□ -0.82
Ube2e3-201ENSMUST00000028398 Krtap19-1Q925H2 87 aa9.88□□□□□ -0.83
Ube2e3-201ENSMUST00000028398 Gm10318A0A1W2P728 225 aa9.87□□□□□ -0.83
Ube2e3-201ENSMUST00000028398 Crct1Q6PAI5 102 aa9.87□□□□□ -0.83
Ube2e3-201ENSMUST00000028398 Ndufaf8A2AMZ4 74 aa9.79□□□□□ -0.84
Ube2e3-201ENSMUST00000028398 Krtap19-3Q925H6 87 aa9.79□□□□□ -0.84
Ube2e3-201ENSMUST00000028398 Lce1mQ9CR91 182 aa9.72□□□□□ -0.85
Ube2e3-201ENSMUST00000028398 Herc1E9PZP8 4859 aa9.7□□□□□ -0.86
Ube2e3-201ENSMUST00000028398 Krtap1-4Q3V2D6 188 aa9.67□□□□□ -0.86
Ube2e3-201ENSMUST00000028398 Gm19668J3QMD1 248 aa9.66□□□□□ -0.86
Ube2e3-201ENSMUST00000028398 Camk2n1Q6QWF9 78 aa9.57□□□□□ -0.88
Ube2e3-201ENSMUST00000028398 Gm18596A0A1W2P860 280 aa9.39□□□□□ -0.91
Ube2e3-201ENSMUST00000028398 4932415D10RikA0A1W2P6U8 4986 aa9.37□□□□□ -0.91
Ube2e3-201ENSMUST00000028398 ZanO88799 5376 aa9.34□□□□□ -0.91
Ube2e3-201ENSMUST00000028398 Lce1jD3YUU5 139 aa9.27□□□□□ -0.93
Ube2e3-201ENSMUST00000028398 Krtap1-3A2A588 173 aa9.25□□□□□ -0.93
Ube2e3-201ENSMUST00000028398 Ush2AQ2QI47 5193 aa9.24□□□□□ -0.93
Ube2e3-201ENSMUST00000028398 Prm2P07978 107 aa9.23□□□□□ -0.93
Ube2e3-201ENSMUST00000028398 Hmcn2A2AJ76 5100 aa9.19□□□□□ -0.94
Ube2e3-201ENSMUST00000028398 Krtap12-1Q9Z287 130 aa9.18□□□□□ -0.94
Ube2e3-201ENSMUST00000028398 Krtap19-9aF8WH65 55 aa9.17□□□□□ -0.94
Ube2e3-201ENSMUST00000028398 Fat4Q2PZL6 4981 aa9.13□□□□□ -0.95
Ube2e3-201ENSMUST00000028398 Ubr4A2AN08 5180 aa9.13□□□□□ -0.95
Ube2e3-201ENSMUST00000028398 Tnp1P10856 55 aa9.07□□□□□ -0.96
Ube2e3-201ENSMUST00000028398 LorP18165 486 aa9.01□□□□□ -0.97
Ube2e3-201ENSMUST00000028398 Gm9789Q8BIG3 52 aa9.01□□□□□ -0.97
Ube2e3-201ENSMUST00000028398 Prm1P02319 51 aa9□□□□□ -0.97
Ube2e3-201ENSMUST00000028398 Gm7735D3YX18 52 aa8.97□□□□□ -0.97
Ube2e3-201ENSMUST00000028398 Rnf213E9Q555 5152 aaKnown RBP8.89□□□□□ -0.99
Ube2e3-201ENSMUST00000028398 Krtap8-1O08633 61 aa8.86□□□□□ -0.99
Ube2e3-201ENSMUST00000028398 Gm9112A2AI92 75 aa8.84□□□□□ -0.99
Ube2e3-201ENSMUST00000028398 Krtap17-1A2A5X6 109 aa8.78□□□□□ -1
Ube2e3-201ENSMUST00000028398 2310046K23RikA0A0A6YVW6 87 aa8.7□□□□□ -1.02
Ube2e3-201ENSMUST00000028398 Lce1iQ9D6P5 149 aa8.7□□□□□ -1.02
Ube2e3-201ENSMUST00000028398 Krtap19-9bQ99NG9 58 aa8.69□□□□□ -1.02
Ube2e3-201ENSMUST00000028398 Lce1a2Q9D1K4 149 aa8.65□□□□□ -1.03
Ube2e3-201ENSMUST00000028398 Krtap19-2Q925I0 141 aa8.63□□□□□ -1.03
Ube2e3-201ENSMUST00000028398 SspoQ8CG65 4998 aa8.62□□□□□ -1.03
Ube2e3-201ENSMUST00000028398 Krtap9-5A2A5X3 358 aa8.55□□□□□ -1.04
Ube2e3-201ENSMUST00000028398 Krtap9-3Q3V2C1 136 aa8.41□□□□□ -1.06
Ube2e3-201ENSMUST00000028398 Lce1hQ9D6R3 140 aa8.33□□□□□ -1.08
Ube2e3-201ENSMUST00000028398 Muc5bE9Q5I3 4800 aa8.11□□□□□ -1.11
Ube2e3-201ENSMUST00000028398 Mt2P02798 61 aa8.09□□□□□ -1.11
Ube2e3-201ENSMUST00000028398 Gm6358A0A087WPH4 74 aa8.07□□□□□ -1.12
Ube2e3-201ENSMUST00000028398 Gm10061D3Z714 54 aa8.04□□□□□ -1.12
Ube2e3-201ENSMUST00000028398 Lce1dQ9D731 133 aa7.84□□□□□ -1.15
Ube2e3-201ENSMUST00000028398 Sprr2gO70558 76 aa7.76□□□□□ -1.17
Ube2e3-201ENSMUST00000028398 Gm11569B1AQB1 180 aa7.75□□□□□ -1.17
Ube2e3-201ENSMUST00000028398 Sprr2dO70555 85 aa7.63□□□□□ -1.19
Ube2e3-201ENSMUST00000028398 4933428G20RikQ9D3X4 101 aa7.61□□□□□ -1.19
Ube2e3-201ENSMUST00000028398 Lce1eQ9D139 143 aa7.59□□□□□ -1.19
Ube2e3-201ENSMUST00000028398 Krtap22-2J3QNX6 67 aa7.59□□□□□ -1.19
Ube2e3-201ENSMUST00000028398 Gm11938Q9D3H4 131 aa7.58□□□□□ -1.2
Ube2e3-201ENSMUST00000028398 Gm10272F7CZ33 110 aa7.51□□□□□ -1.21
Ube2e3-201ENSMUST00000028398 Gm11562A0PK51 136 aa7.35□□□□□ -1.23
Ube2e3-201ENSMUST00000028398 Krtap4-2B1AQ85 167 aa7.31□□□□□ -1.24
Ube2e3-201ENSMUST00000028398 Mdn1A2ANY6 5589 aaKnown RBP7.26□□□□□ -1.25
Ube2e3-201ENSMUST00000028398 Lce1gQ9D195 139 aa7.25□□□□□ -1.25
Ube2e3-201ENSMUST00000028398 Lce1cQ9D1C5 147 aa7.21□□□□□ -1.25
Ube2e3-201ENSMUST00000028398 Gm11555B1AQ89 175 aa7.16□□□□□ -1.26
Ube2e3-201ENSMUST00000028398 Syne2Q6ZWQ0 6874 aaKnown RBP7.14□□□□□ -1.27
Ube2e3-201ENSMUST00000028398 Krtap4-6Q3V4B7 195 aa7.11□□□□□ -1.27
Ube2e3-201ENSMUST00000028398 Krtap19-4Q925H7 84 aa7.11□□□□□ -1.27
Ube2e3-201ENSMUST00000028398 Gm11596B1AQB0 205 aa7.03□□□□□ -1.28
Ube2e3-201ENSMUST00000028398 Gm10100J3QK64 120 aa6.97□□□□□ -1.29
Ube2e3-201ENSMUST00000028398 Krtap4-1Q3UUY3 169 aa6.97□□□□□ -1.29
Ube2e3-201ENSMUST00000028398 Lce3bQ9CQM7 98 aa6.97□□□□□ -1.29
Ube2e3-201ENSMUST00000028398 Lce1fB9EJP6 147 aa6.94□□□□□ -1.3
Ube2e3-201ENSMUST00000028398 Lce1a1Q9CQH5 143 aa6.94□□□□□ -1.3
Ube2e3-201ENSMUST00000028398 Gm10142J3KMP7 120 aa6.84□□□□□ -1.31
Ube2e3-201ENSMUST00000028398 Syne1Q6ZWR6 8799 aa6.84□□□□□ -1.31
Ube2e3-201ENSMUST00000028398 Gm11564A2A4L9 201 aa6.78□□□□□ -1.32
Ube2e3-201ENSMUST00000028398 Gm11563B1AQ90 168 aa6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms