RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Krtap3-1A2A591 98 aa9,73□□□□□ -0,85
Tram1-201ENSMUST00000027068 Abca13Q5SSE9 5034 aa9,66□□□□□ -0,86
Tram1-201ENSMUST00000027068 Dnah8Q91XQ0 4731 aa9,56□□□□□ -0,88
Tram1-201ENSMUST00000027068 Gm17416Q30KP4 66 aa9,56□□□□□ -0,88
Tram1-201ENSMUST00000027068 Gm9112A2AI92 75 aa9,52□□□□□ -0,89
Tram1-201ENSMUST00000027068 Ryr2E9Q401 4966 aaKnown RBP9,5□□□□□ -0,89
Tram1-201ENSMUST00000027068 Gm19426M0QWC7 77 aa9,46□□□□□ -0,9
Tram1-201ENSMUST00000027068 2210017I01RikA0A0A6YVV1 95 aa9,45□□□□□ -0,9
Tram1-201ENSMUST00000027068 B930094E09RikQ8C4T2 136 aa9,41□□□□□ -0,9
Tram1-201ENSMUST00000027068 Gm19668J3QMD1 248 aa9,39□□□□□ -0,91
Tram1-201ENSMUST00000027068 2310057N15RikQ9D6T8 200 aa9,38□□□□□ -0,91
Tram1-201ENSMUST00000027068 Krtap7-1Q9D3I6 87 aa9,33□□□□□ -0,92
Tram1-201ENSMUST00000027068 BC029722A0A0N4SW31 51 aa9,28□□□□□ -0,92
Tram1-201ENSMUST00000027068 Krtap13-1Q8K198 168 aa9,28□□□□□ -0,92
Tram1-201ENSMUST00000027068 Ryr1E9PZQ0 5035 aa9,27□□□□□ -0,92
Tram1-201ENSMUST00000027068 Gm19402J3QJV4 266 aa9,18□□□□□ -0,94
Tram1-201ENSMUST00000027068 Kiaa1109A2AAE1 5005 aa9,13□□□□□ -0,95
Tram1-201ENSMUST00000027068 HydinQ80W93 5154 aa9,12□□□□□ -0,95
Tram1-201ENSMUST00000027068 Fam229aB2KGE5 128 aa9,1□□□□□ -0,95
Tram1-201ENSMUST00000027068 Lrp2A2ARV4 4660 aa9,06□□□□□ -0,96
Tram1-201ENSMUST00000027068 Gm10318A0A1W2P728 225 aa9,04□□□□□ -0,96
Tram1-201ENSMUST00000027068 Herc2Q4U2R1 4836 aa9□□□□□ -0,97
Tram1-201ENSMUST00000027068 Dnhd1D3Z2X2 4750 aa8,92□□□□□ -0,98
Tram1-201ENSMUST00000027068 Gm17402F6Z0L5 76 aa8,92□□□□□ -0,98
Tram1-201ENSMUST00000027068 Krtap1-5A2A590 122 aa8,91□□□□□ -0,98
Tram1-201ENSMUST00000027068 Spink7Q6IE32 76 aa8,91□□□□□ -0,98
Tram1-201ENSMUST00000027068 Crct1Q6PAI5 102 aa8,9□□□□□ -0,99
Tram1-201ENSMUST00000027068 Sec61bQ9CQS8 96 aaKnown RBP8,82□□□□□ -1
Tram1-201ENSMUST00000027068 Sprr2a3Q4KL71 83 aa8,8□□□□□ -1
Tram1-201ENSMUST00000027068 Sprr2a1Q9CQK8 83 aa8,8□□□□□ -1
Tram1-201ENSMUST00000027068 Gm40193A0A1B0GT39 78 aa8,79□□□□□ -1
Tram1-201ENSMUST00000027068 Birc6O88738 4882 aa8,71□□□□□ -1,01
Tram1-201ENSMUST00000027068 PcloQ9QYX7 5068 aa8,71□□□□□ -1,01
Tram1-201ENSMUST00000027068 Krtap16-3Q8C1I6 86 aa8,69□□□□□ -1,02
Tram1-201ENSMUST00000027068 Camk2n1Q6QWF9 78 aa8,56□□□□□ -1,04
Tram1-201ENSMUST00000027068 Krtap19-1Q925H2 87 aa8,51□□□□□ -1,05
Tram1-201ENSMUST00000027068 Krtap19-3Q925H6 87 aa8,46□□□□□ -1,06
Tram1-201ENSMUST00000027068 Krtap1-4Q3V2D6 188 aa8,38□□□□□ -1,07
Tram1-201ENSMUST00000027068 Ubr4A2AN08 5180 aa8,35□□□□□ -1,07
Tram1-201ENSMUST00000027068 ZanO88799 5376 aa8,28□□□□□ -1,08
Tram1-201ENSMUST00000027068 Herc1E9PZP8 4859 aa8,26□□□□□ -1,09
Tram1-201ENSMUST00000027068 Fat4Q2PZL6 4981 aa8,21□□□□□ -1,09
Tram1-201ENSMUST00000027068 4932415D10RikA0A1W2P6U8 4986 aa8,19□□□□□ -1,1
Tram1-201ENSMUST00000027068 Lce1jD3YUU5 139 aa8,18□□□□□ -1,1
Tram1-201ENSMUST00000027068 Lce1mQ9CR91 182 aa8,09□□□□□ -1,11
Tram1-201ENSMUST00000027068 Tnp1P10856 55 aa8,05□□□□□ -1,12
Tram1-201ENSMUST00000027068 Krtap12-1Q9Z287 130 aa7,96□□□□□ -1,13
Tram1-201ENSMUST00000027068 Krtap1-3A2A588 173 aa7,93□□□□□ -1,14
Tram1-201ENSMUST00000027068 Krtap19-9aF8WH65 55 aa7,92□□□□□ -1,14
Tram1-201ENSMUST00000027068 Ush2AQ2QI47 5193 aa7,92□□□□□ -1,14
Tram1-201ENSMUST00000027068 LorP18165 486 aa7,91□□□□□ -1,14
Tram1-201ENSMUST00000027068 Krtap17-1A2A5X6 109 aa7,9□□□□□ -1,14
Tram1-201ENSMUST00000027068 Hmcn2A2AJ76 5100 aa7,88□□□□□ -1,15
Tram1-201ENSMUST00000027068 Rnf213E9Q555 5152 aaKnown RBP7,8□□□□□ -1,16
Tram1-201ENSMUST00000027068 Gm18596A0A1W2P860 280 aa7,75□□□□□ -1,17
Tram1-201ENSMUST00000027068 Krtap8-1O08633 61 aa7,66□□□□□ -1,18
Tram1-201ENSMUST00000027068 Lce1iQ9D6P5 149 aa7,64□□□□□ -1,19
Tram1-201ENSMUST00000027068 Lce1a2Q9D1K4 149 aa7,61□□□□□ -1,19
Tram1-201ENSMUST00000027068 Krtap9-3Q3V2C1 136 aa7,59□□□□□ -1,19
Tram1-201ENSMUST00000027068 Gm9789Q8BIG3 52 aa7,58□□□□□ -1,2
Tram1-201ENSMUST00000027068 2310046K23RikA0A0A6YVW6 87 aa7,55□□□□□ -1,2
Tram1-201ENSMUST00000027068 Krtap19-9bQ99NG9 58 aa7,55□□□□□ -1,2
Tram1-201ENSMUST00000027068 Prm1P02319 51 aa7,5□□□□□ -1,21
Tram1-201ENSMUST00000027068 Gm7735D3YX18 52 aa7,48□□□□□ -1,21
Tram1-201ENSMUST00000027068 Krtap9-5A2A5X3 358 aa7,45□□□□□ -1,22
Tram1-201ENSMUST00000027068 Lce1hQ9D6R3 140 aa7,45□□□□□ -1,22
Tram1-201ENSMUST00000027068 Krtap19-2Q925I0 141 aa7,44□□□□□ -1,22
Tram1-201ENSMUST00000027068 SspoQ8CG65 4998 aa7,2□□□□□ -1,26
Tram1-201ENSMUST00000027068 Lce1dQ9D731 133 aa7,15□□□□□ -1,26
Tram1-201ENSMUST00000027068 Mt2P02798 61 aa7,04□□□□□ -1,28
Tram1-201ENSMUST00000027068 Gm6358A0A087WPH4 74 aa6,95□□□□□ -1,3
Tram1-201ENSMUST00000027068 Lce1eQ9D139 143 aa6,88□□□□□ -1,31
Tram1-201ENSMUST00000027068 Muc5bE9Q5I3 4800 aa6,83□□□□□ -1,32
Tram1-201ENSMUST00000027068 Gm10061D3Z714 54 aa6,8□□□□□ -1,32
Tram1-201ENSMUST00000027068 Sprr2gO70558 76 aa6,78□□□□□ -1,32
Tram1-201ENSMUST00000027068 Krtap31-1Q9D644 177 aa6,77□□□□□ -1,33
Tram1-201ENSMUST00000027068 Gm11938Q9D3H4 131 aa6,73□□□□□ -1,33
Tram1-201ENSMUST00000027068 Gm10272F7CZ33 110 aa6,72□□□□□ -1,33
Tram1-201ENSMUST00000027068 4933428G20RikQ9D3X4 101 aa6,7□□□□□ -1,34
Tram1-201ENSMUST00000027068 Sprr2dO70555 85 aa6,59□□□□□ -1,36
Tram1-201ENSMUST00000027068 Lce1cQ9D1C5 147 aa6,56□□□□□ -1,36
Tram1-201ENSMUST00000027068 Krtap22-2J3QNX6 67 aa6,54□□□□□ -1,36
Tram1-201ENSMUST00000027068 Mdn1A2ANY6 5589 aaKnown RBP6,51□□□□□ -1,37
Tram1-201ENSMUST00000027068 Gm11569B1AQB1 180 aa6,47□□□□□ -1,37
Tram1-201ENSMUST00000027068 Lce1fB9EJP6 147 aa6,32□□□□□ -1,4
Tram1-201ENSMUST00000027068 Lce1a1Q9CQH5 143 aa6,32□□□□□ -1,4
Tram1-201ENSMUST00000027068 Gm10100J3QK64 120 aa6,31□□□□□ -1,4
Tram1-201ENSMUST00000027068 Gm11562A0PK51 136 aa6,29□□□□□ -1,4
Tram1-201ENSMUST00000027068 Lce3bQ9CQM7 98 aa6,26□□□□□ -1,41
Tram1-201ENSMUST00000027068 Syne1Q6ZWR6 8799 aa6,18□□□□□ -1,42
Tram1-201ENSMUST00000027068 Gm10142J3KMP7 120 aa6,15□□□□□ -1,42
Tram1-201ENSMUST00000027068 Krtap19-4Q925H7 84 aa6,12□□□□□ -1,43
Tram1-201ENSMUST00000027068 Sprr2iO70560 76 aa6,09□□□□□ -1,43
Tram1-201ENSMUST00000027068 Krtap31-2Q8CAY5 177 aa6,02□□□□□ -1,45
Tram1-201ENSMUST00000027068 Lce3cQ91V05 98 aa6,02□□□□□ -1,45
Tram1-201ENSMUST00000027068 Lce3dE9Q8V1 98 aa5,97□□□□□ -1,45
Tram1-201ENSMUST00000027068 Krtap4-6Q3V4B7 195 aa5,92□□□□□ -1,46
Tram1-201ENSMUST00000027068 Lce1gQ9D195 139 aa5,9□□□□□ -1,47
Tram1-201ENSMUST00000027068 Krtap4-2B1AQ85 167 aa5,89□□□□□ -1,47
Tram1-201ENSMUST00000027068 Gm11555B1AQ89 175 aa5,89□□□□□ -1,47
Retrieved 100 of 22,080 RNA–protein pairs in 40,1 ms