RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Dnah8Q91XQ0 4731 aa4.75□□□□□ -1.65
Ctc1-201ENSMUST00000021278 Herc1E9PZP8 4859 aa4.73□□□□□ -1.65
Ctc1-201ENSMUST00000021278 B930094E09RikQ8C4T2 136 aa4.73□□□□□ -1.65
Ctc1-201ENSMUST00000021278 Kmt2cQ8BRH4 4903 aa4.72□□□□□ -1.65
Ctc1-201ENSMUST00000021278 ApobE9Q414 4505 aa4.71□□□□□ -1.66
Ctc1-201ENSMUST00000021278 Abca13Q5SSE9 5034 aa4.71□□□□□ -1.66
Ctc1-201ENSMUST00000021278 Dnhd1D3Z2X2 4750 aa4.7□□□□□ -1.66
Ctc1-201ENSMUST00000021278 Gm19668J3QMD1 248 aa4.68□□□□□ -1.66
Ctc1-201ENSMUST00000021278 Krtap19-5O08632 62 aa4.68□□□□□ -1.66
Ctc1-201ENSMUST00000021278 Gm5767A0A0J9YTU8 78 aa4.67□□□□□ -1.66
Ctc1-201ENSMUST00000021278 Lrp1Q91ZX7 4545 aaKnown RBP4.64□□□□□ -1.67
Ctc1-201ENSMUST00000021278 Lrp2A2ARV4 4660 aa4.64□□□□□ -1.67
Ctc1-201ENSMUST00000021278 Mycbp2Q7TPH6 4711 aa4.63□□□□□ -1.67
Ctc1-201ENSMUST00000021278 Krtap7-1Q9D3I6 87 aa4.63□□□□□ -1.67
Ctc1-201ENSMUST00000021278 Krtap3-2Q9D638 99 aa4.61□□□□□ -1.67
Ctc1-201ENSMUST00000021278 Krtap3-3Q9D7P0 99 aa4.61□□□□□ -1.67
Ctc1-201ENSMUST00000021278 Fat3Q8BNA6 4555 aa4.61□□□□□ -1.67
Ctc1-201ENSMUST00000021278 Pkhd1E9PZ36 4059 aa4.59□□□□□ -1.67
Ctc1-201ENSMUST00000021278 Gm9736A0A1W2P7N1 277 aa4.55□□□□□ -1.68
Ctc1-201ENSMUST00000021278 Lrp1bQ9JI18 4599 aa4.54□□□□□ -1.68
Ctc1-201ENSMUST00000021278 Tnp1P10856 55 aa4.51□□□□□ -1.69
Ctc1-201ENSMUST00000021278 Vps13bQ80TY5 3993 aa4.46□□□□□ -1.7
Ctc1-201ENSMUST00000021278 4932415D10RikA0A1W2P6U8 4986 aa4.46□□□□□ -1.7
Ctc1-201ENSMUST00000021278 Krtap13-1Q8K198 168 aa4.45□□□□□ -1.7
Ctc1-201ENSMUST00000021278 Rps29P62274 56 aa4.43□□□□□ -1.7
Ctc1-201ENSMUST00000021278 Ush2AQ2QI47 5193 aa4.42□□□□□ -1.7
Ctc1-201ENSMUST00000021278 Gm7735D3YX18 52 aa4.42□□□□□ -1.7
Ctc1-201ENSMUST00000021278 Prm1P02319 51 aa4.41□□□□□ -1.7
Ctc1-201ENSMUST00000021278 Ubr4A2AN08 5180 aa4.39□□□□□ -1.71
Ctc1-201ENSMUST00000021278 Hectd4E9Q2E4 4418 aa4.39□□□□□ -1.71
Ctc1-201ENSMUST00000021278 Gm11939A2A592 99 aa4.39□□□□□ -1.71
Ctc1-201ENSMUST00000021278 Gm17416Q30KP4 66 aa4.38□□□□□ -1.71
Ctc1-201ENSMUST00000021278 Pkhd1l1Q80ZA4 4249 aa4.38□□□□□ -1.71
Ctc1-201ENSMUST00000021278 Fat2Q5F226 4351 aa4.37□□□□□ -1.71
Ctc1-201ENSMUST00000021278 Gm9789Q8BIG3 52 aa4.32□□□□□ -1.72
Ctc1-201ENSMUST00000021278 Krtap3-1A2A591 98 aa4.32□□□□□ -1.72
Ctc1-201ENSMUST00000021278 Hmcn2A2AJ76 5100 aa4.28□□□□□ -1.73
Ctc1-201ENSMUST00000021278 2210017I01RikA0A0A6YVV1 95 aa4.25□□□□□ -1.73
Ctc1-201ENSMUST00000021278 Crct1Q6PAI5 102 aa4.23□□□□□ -1.73
Ctc1-201ENSMUST00000021278 Gm17402F6Z0L5 76 aa4.22□□□□□ -1.73
Ctc1-201ENSMUST00000021278 Gm19402J3QJV4 266 aa4.19□□□□□ -1.74
Ctc1-201ENSMUST00000021278 Krtap17-1A2A5X6 109 aa4.16□□□□□ -1.74
Ctc1-201ENSMUST00000021278 LorP18165 486 aa4.12□□□□□ -1.75
Ctc1-201ENSMUST00000021278 Gm10318A0A1W2P728 225 aa4.11□□□□□ -1.75
Ctc1-201ENSMUST00000021278 Fat4Q2PZL6 4981 aa4.06□□□□□ -1.76
Ctc1-201ENSMUST00000021278 Krtap1-3A2A588 173 aa4.06□□□□□ -1.76
Ctc1-201ENSMUST00000021278 ZanO88799 5376 aa4.04□□□□□ -1.76
Ctc1-201ENSMUST00000021278 Sprr2a3Q4KL71 83 aa3.97□□□□□ -1.77
Ctc1-201ENSMUST00000021278 Sprr2a1Q9CQK8 83 aa3.97□□□□□ -1.77
Ctc1-201ENSMUST00000021278 Rnf213E9Q555 5152 aaKnown RBP3.95□□□□□ -1.78
Ctc1-201ENSMUST00000021278 4933428G20RikQ9D3X4 101 aa3.94□□□□□ -1.78
Ctc1-201ENSMUST00000021278 Krtap4-2B1AQ85 167 aa3.92□□□□□ -1.78
Ctc1-201ENSMUST00000021278 Gm10061D3Z714 54 aa3.9□□□□□ -1.79
Ctc1-201ENSMUST00000021278 Gm11569B1AQB1 180 aa3.88□□□□□ -1.79
Ctc1-201ENSMUST00000021278 Gm11562A0PK51 136 aa3.87□□□□□ -1.79
Ctc1-201ENSMUST00000021278 Krtap19-3Q925H6 87 aa3.83□□□□□ -1.8
Ctc1-201ENSMUST00000021278 Krtap16-3Q8C1I6 86 aa3.81□□□□□ -1.8
Ctc1-201ENSMUST00000021278 Lce1gQ9D195 139 aa3.81□□□□□ -1.8
Ctc1-201ENSMUST00000021278 Mdn1A2ANY6 5589 aaKnown RBP3.8□□□□□ -1.8
Ctc1-201ENSMUST00000021278 Krtap19-1Q925H2 87 aa3.79□□□□□ -1.8
Ctc1-201ENSMUST00000021278 Krtap31-1Q9D644 177 aa3.76□□□□□ -1.81
Ctc1-201ENSMUST00000021278 Syne2Q6ZWQ0 6874 aaKnown RBP3.76□□□□□ -1.81
Ctc1-201ENSMUST00000021278 Krtap1-4Q3V2D6 188 aa3.67□□□□□ -1.82
Ctc1-201ENSMUST00000021278 Gm11596B1AQB0 205 aa3.66□□□□□ -1.82
Ctc1-201ENSMUST00000021278 Krtap1-5A2A590 122 aa3.66□□□□□ -1.82
Ctc1-201ENSMUST00000021278 Syne1Q6ZWR6 8799 aa3.65□□□□□ -1.83
Ctc1-201ENSMUST00000021278 Krtap4-6Q3V4B7 195 aa3.64□□□□□ -1.83
Ctc1-201ENSMUST00000021278 Krtap12-1Q9Z287 130 aa3.62□□□□□ -1.83
Ctc1-201ENSMUST00000021278 SspoQ8CG65 4998 aa3.62□□□□□ -1.83
Ctc1-201ENSMUST00000021278 Muc5bE9Q5I3 4800 aa3.57□□□□□ -1.84
Ctc1-201ENSMUST00000021278 2310046K23RikA0A0A6YVW6 87 aa3.56□□□□□ -1.84
Ctc1-201ENSMUST00000021278 Krtap4-1Q3UUY3 169 aa3.55□□□□□ -1.84
Ctc1-201ENSMUST00000021278 Krtap9-5A2A5X3 358 aa3.55□□□□□ -1.84
Ctc1-201ENSMUST00000021278 Gm11555B1AQ89 175 aa3.52□□□□□ -1.85
Ctc1-201ENSMUST00000021278 Fsip2A2ARZ3 6995 aa3.5□□□□□ -1.85
Ctc1-201ENSMUST00000021278 Krtap19-2Q925I0 141 aa3.48□□□□□ -1.85
Ctc1-201ENSMUST00000021278 Gm11564A2A4L9 201 aa3.47□□□□□ -1.85
Ctc1-201ENSMUST00000021278 Gm11563B1AQ90 168 aa3.47□□□□□ -1.85
Ctc1-201ENSMUST00000021278 Gm11595B1AQA7 289 aa3.47□□□□□ -1.85
Ctc1-201ENSMUST00000021278 Krtap4-8B1AQA8 209 aa3.47□□□□□ -1.85
Ctc1-201ENSMUST00000021278 Krtap19-9bQ99NG9 58 aa3.47□□□□□ -1.85
Ctc1-201ENSMUST00000021278 Gm6358A0A087WPH4 74 aa3.43□□□□□ -1.86
Ctc1-201ENSMUST00000021278 Lce1jD3YUU5 139 aa3.43□□□□□ -1.86
Ctc1-201ENSMUST00000021278 Krtap31-2Q8CAY5 177 aa3.4□□□□□ -1.86
Ctc1-201ENSMUST00000021278 Krtap19-9aF8WH65 55 aa3.4□□□□□ -1.87
Ctc1-201ENSMUST00000021278 Krtap4-9B1AQA9 244 aa3.39□□□□□ -1.87
Ctc1-201ENSMUST00000021278 Gm10100J3QK64 120 aa3.38□□□□□ -1.87
Ctc1-201ENSMUST00000021278 Mt4P47945 62 aa3.37□□□□□ -1.87
Ctc1-201ENSMUST00000021278 Sprr2kO70562 68 aa3.36□□□□□ -1.87
Ctc1-201ENSMUST00000021278 Muc16A0A140LJ72 8478 aa3.35□□□□□ -1.87
Ctc1-201ENSMUST00000021278 Gm10272F7CZ33 110 aa3.33□□□□□ -1.88
Ctc1-201ENSMUST00000021278 Krtap8-1O08633 61 aa3.33□□□□□ -1.88
Ctc1-201ENSMUST00000021278 Krtap4-13Q9D7P3 165 aa3.29□□□□□ -1.88
Ctc1-201ENSMUST00000021278 Gm10142J3KMP7 120 aa3.28□□□□□ -1.88
Ctc1-201ENSMUST00000021278 Gm38119A0A0A6YX29 146 aa3.23□□□□□ -1.89
Ctc1-201ENSMUST00000021278 Lce1dQ9D731 133 aa3.22□□□□□ -1.89
Ctc1-201ENSMUST00000021278 Lce1lQ9D1G7 135 aa3.22□□□□□ -1.89
Ctc1-201ENSMUST00000021278 Lce3bQ9CQM7 98 aa3.2□□□□□ -1.9
Ctc1-201ENSMUST00000021278 Mt2P02798 61 aa3.2□□□□□ -1.9
Ctc1-201ENSMUST00000021278 Krtap9-3Q3V2C1 136 aa3.19□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms