RNA–Protein interactions for RNA: ENSMUST00000020078.13

Lims1-202, Transcript of LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lims1, Length 4,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1-202ENSMUST00000020078 Krtap3-1A2A591 98 aa6.19□□□□□ -1.42
Lims1-202ENSMUST00000020078 Fat1A0A1L1SQU7 4645 aa6.09□□□□□ -1.44
Lims1-202ENSMUST00000020078 Fras1Q80T14 4010 aa6.08□□□□□ -1.44
Lims1-202ENSMUST00000020078 Dnah7cA0A087WR13 4024 aa6.08□□□□□ -1.44
Lims1-202ENSMUST00000020078 Lrp1Q91ZX7 4545 aaKnown RBP6.08□□□□□ -1.44
Lims1-202ENSMUST00000020078 Mycbp2Q7TPH6 4711 aa6.07□□□□□ -1.44
Lims1-202ENSMUST00000020078 Hectd4E9Q2E4 4418 aa6.07□□□□□ -1.44
Lims1-202ENSMUST00000020078 Gm40193A0A1B0GT39 78 aa6.06□□□□□ -1.44
Lims1-202ENSMUST00000020078 SacsQ9JLC8 4582 aa6.03□□□□□ -1.44
Lims1-202ENSMUST00000020078 Gm17402F6Z0L5 76 aa6.03□□□□□ -1.44
Lims1-202ENSMUST00000020078 Pkd1O08852 4293 aa6.02□□□□□ -1.45
Lims1-202ENSMUST00000020078 Dnah7aE9Q0T8 4024 aa6□□□□□ -1.45
Lims1-202ENSMUST00000020078 Kiaa1109A2AAE1 5005 aa5.94□□□□□ -1.46
Lims1-202ENSMUST00000020078 Fat3Q8BNA6 4555 aa5.92□□□□□ -1.46
Lims1-202ENSMUST00000020078 HydinQ80W93 5154 aa5.88□□□□□ -1.47
Lims1-202ENSMUST00000020078 Herc2Q4U2R1 4836 aa5.88□□□□□ -1.47
Lims1-202ENSMUST00000020078 Tnp1P10856 55 aa5.85□□□□□ -1.47
Lims1-202ENSMUST00000020078 Krtap1-5A2A590 122 aa5.84□□□□□ -1.47
Lims1-202ENSMUST00000020078 Ryr2E9Q401 4966 aaKnown RBP5.84□□□□□ -1.48
Lims1-202ENSMUST00000020078 Fat2Q5F226 4351 aa5.82□□□□□ -1.48
Lims1-202ENSMUST00000020078 Lrp2A2ARV4 4660 aa5.81□□□□□ -1.48
Lims1-202ENSMUST00000020078 Dnah8Q91XQ0 4731 aa5.79□□□□□ -1.48
Lims1-202ENSMUST00000020078 Vps13bQ80TY5 3993 aa5.77□□□□□ -1.49
Lims1-202ENSMUST00000020078 Gm19668J3QMD1 248 aa5.77□□□□□ -1.49
Lims1-202ENSMUST00000020078 Krtap7-1Q9D3I6 87 aa5.75□□□□□ -1.49
Lims1-202ENSMUST00000020078 Gm18596A0A1W2P860 280 aa5.69□□□□□ -1.5
Lims1-202ENSMUST00000020078 LorP18165 486 aa5.67□□□□□ -1.5
Lims1-202ENSMUST00000020078 Sprr2a3Q4KL71 83 aa5.66□□□□□ -1.5
Lims1-202ENSMUST00000020078 Sprr2a1Q9CQK8 83 aa5.66□□□□□ -1.5
Lims1-202ENSMUST00000020078 Abca13Q5SSE9 5034 aa5.63□□□□□ -1.51
Lims1-202ENSMUST00000020078 Krtap1-4Q3V2D6 188 aa5.62□□□□□ -1.51
Lims1-202ENSMUST00000020078 Gm19402J3QJV4 266 aa5.62□□□□□ -1.51
Lims1-202ENSMUST00000020078 Lce1mQ9CR91 182 aa5.59□□□□□ -1.51
Lims1-202ENSMUST00000020078 Krtap16-3Q8C1I6 86 aa5.59□□□□□ -1.51
Lims1-202ENSMUST00000020078 Krtap19-3Q925H6 87 aa5.53□□□□□ -1.52
Lims1-202ENSMUST00000020078 Dnhd1D3Z2X2 4750 aa5.52□□□□□ -1.53
Lims1-202ENSMUST00000020078 Kmt2cQ8BRH4 4903 aa5.52□□□□□ -1.53
Lims1-202ENSMUST00000020078 Krtap19-9aF8WH65 55 aa5.5□□□□□ -1.53
Lims1-202ENSMUST00000020078 Krtap19-1Q925H2 87 aa5.49□□□□□ -1.53
Lims1-202ENSMUST00000020078 Pkhd1l1Q80ZA4 4249 aa5.48□□□□□ -1.53
Lims1-202ENSMUST00000020078 Birc6O88738 4882 aa5.46□□□□□ -1.53
Lims1-202ENSMUST00000020078 Krtap12-1Q9Z287 130 aa5.45□□□□□ -1.54
Lims1-202ENSMUST00000020078 Pkhd1E9PZ36 4059 aa5.4□□□□□ -1.54
Lims1-202ENSMUST00000020078 Krtap1-3A2A588 173 aa5.26□□□□□ -1.57
Lims1-202ENSMUST00000020078 Prm1P02319 51 aa5.25□□□□□ -1.57
Lims1-202ENSMUST00000020078 PcloQ9QYX7 5068 aa5.21□□□□□ -1.58
Lims1-202ENSMUST00000020078 Krtap19-9bQ99NG9 58 aa5.2□□□□□ -1.58
Lims1-202ENSMUST00000020078 Gm7735D3YX18 52 aa5.18□□□□□ -1.58
Lims1-202ENSMUST00000020078 Herc1E9PZP8 4859 aa5.17□□□□□ -1.58
Lims1-202ENSMUST00000020078 Krtap9-5A2A5X3 358 aa5.16□□□□□ -1.58
Lims1-202ENSMUST00000020078 Gm9789Q8BIG3 52 aa5.14□□□□□ -1.59
Lims1-202ENSMUST00000020078 Lce1jD3YUU5 139 aa5.14□□□□□ -1.59
Lims1-202ENSMUST00000020078 Ubr4A2AN08 5180 aa5.09□□□□□ -1.59
Lims1-202ENSMUST00000020078 Krtap8-1O08633 61 aa5.05□□□□□ -1.6
Lims1-202ENSMUST00000020078 4932415D10RikA0A1W2P6U8 4986 aa5.02□□□□□ -1.61
Lims1-202ENSMUST00000020078 Krtap19-2Q925I0 141 aa5.02□□□□□ -1.61
Lims1-202ENSMUST00000020078 Gm6358A0A087WPH4 74 aa4.96□□□□□ -1.62
Lims1-202ENSMUST00000020078 Ush2AQ2QI47 5193 aa4.96□□□□□ -1.62
Lims1-202ENSMUST00000020078 4933428G20RikQ9D3X4 101 aa4.95□□□□□ -1.62
Lims1-202ENSMUST00000020078 ZanO88799 5376 aa4.91□□□□□ -1.62
Lims1-202ENSMUST00000020078 Fat4Q2PZL6 4981 aa4.9□□□□□ -1.63
Lims1-202ENSMUST00000020078 Mdn1A2ANY6 5589 aaKnown RBP4.88□□□□□ -1.63
Lims1-202ENSMUST00000020078 Mt2P02798 61 aa4.87□□□□□ -1.63
Lims1-202ENSMUST00000020078 Gm10061D3Z714 54 aa4.84□□□□□ -1.64
Lims1-202ENSMUST00000020078 Lce1iQ9D6P5 149 aa4.76□□□□□ -1.65
Lims1-202ENSMUST00000020078 Krtap17-1A2A5X6 109 aa4.75□□□□□ -1.65
Lims1-202ENSMUST00000020078 Hmcn2A2AJ76 5100 aa4.74□□□□□ -1.65
Lims1-202ENSMUST00000020078 Krtap22-2J3QNX6 67 aa4.71□□□□□ -1.66
Lims1-202ENSMUST00000020078 Rnf213E9Q555 5152 aaKnown RBP4.7□□□□□ -1.66
Lims1-202ENSMUST00000020078 2310046K23RikA0A0A6YVW6 87 aa4.7□□□□□ -1.66
Lims1-202ENSMUST00000020078 Lce1a2Q9D1K4 149 aa4.69□□□□□ -1.66
Lims1-202ENSMUST00000020078 A0A1Y7VJH8 109 aa4.68□□□□□ -1.66
Lims1-202ENSMUST00000020078 Sprr2kO70562 68 aa4.67□□□□□ -1.66
Lims1-202ENSMUST00000020078 Gm11569B1AQB1 180 aa4.64□□□□□ -1.67
Lims1-202ENSMUST00000020078 Gm10272F7CZ33 110 aa4.63□□□□□ -1.67
Lims1-202ENSMUST00000020078 Krtap4-1Q3UUY3 169 aa4.53□□□□□ -1.68
Lims1-202ENSMUST00000020078 Krtap28-10A0A1Y7VP58 119 aa4.52□□□□□ -1.69
Lims1-202ENSMUST00000020078 Syne1Q6ZWR6 8799 aa4.47□□□□□ -1.69
Lims1-202ENSMUST00000020078 Lce3bQ9CQM7 98 aa4.46□□□□□ -1.7
Lims1-202ENSMUST00000020078 Krtap9-3Q3V2C1 136 aa4.45□□□□□ -1.7
Lims1-202ENSMUST00000020078 Lce1hQ9D6R3 140 aa4.42□□□□□ -1.7
Lims1-202ENSMUST00000020078 A0A1Y7VLE6 161 aa4.42□□□□□ -1.7
Lims1-202ENSMUST00000020078 Gm38119A0A0A6YX29 146 aa4.4□□□□□ -1.71
Lims1-202ENSMUST00000020078 Krtap28-13A0A087WQP5 138 aa4.38□□□□□ -1.71
Lims1-202ENSMUST00000020078 Gm10100J3QK64 120 aa4.37□□□□□ -1.71
Lims1-202ENSMUST00000020078 Lce3cQ91V05 98 aa4.35□□□□□ -1.71
Lims1-202ENSMUST00000020078 Muc16A0A140LJ72 8478 aa4.35□□□□□ -1.71
Lims1-202ENSMUST00000020078 Muc5bE9Q5I3 4800 aa4.34□□□□□ -1.71
Lims1-202ENSMUST00000020078 Krtap4-6Q3V4B7 195 aa4.34□□□□□ -1.72
Lims1-202ENSMUST00000020078 SspoQ8CG65 4998 aa4.31□□□□□ -1.72
Lims1-202ENSMUST00000020078 Sprr2gO70558 76 aa4.3□□□□□ -1.72
Lims1-202ENSMUST00000020078 Krtap4-2B1AQ85 167 aa4.26□□□□□ -1.73
Lims1-202ENSMUST00000020078 Lce3eF8VQJ0 98 aa4.25□□□□□ -1.73
Lims1-202ENSMUST00000020078 Lce3fQ6PAI4 98 aa4.25□□□□□ -1.73
Lims1-202ENSMUST00000020078 A030005K14RikA0A1Y7VNY1 122 aa4.23□□□□□ -1.73
Lims1-202ENSMUST00000020078 Gm10142J3KMP7 120 aa4.23□□□□□ -1.73
Lims1-202ENSMUST00000020078 Gm11563B1AQ90 168 aa4.22□□□□□ -1.73
Lims1-202ENSMUST00000020078 Krtap4-7Q9D732 168 aa4.22□□□□□ -1.73
Lims1-202ENSMUST00000020078 Mt4P47945 62 aa4.22□□□□□ -1.73
Lims1-202ENSMUST00000020078 Lce1gQ9D195 139 aa4.21□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms