RNA–Protein interactions for RNA: ENSMUST00000012580.12

Hps3-201, Transcript of Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hps3, Length 4,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3-201ENSMUST00000012580 Fat1A0A1L1SQU7 4645 aa6.28□□□□□ -1.4
Hps3-201ENSMUST00000012580 SacsQ9JLC8 4582 aa6.23□□□□□ -1.41
Hps3-201ENSMUST00000012580 Fat2Q5F226 4351 aa6.19□□□□□ -1.42
Hps3-201ENSMUST00000012580 Sec61bQ9CQS8 96 aaKnown RBP6.19□□□□□ -1.42
Hps3-201ENSMUST00000012580 Mycbp2Q7TPH6 4711 aa6.16□□□□□ -1.42
Hps3-201ENSMUST00000012580 Gm17416Q30KP4 66 aa6.15□□□□□ -1.42
Hps3-201ENSMUST00000012580 Ryr1E9PZQ0 5035 aa6.15□□□□□ -1.43
Hps3-201ENSMUST00000012580 B930094E09RikQ8C4T2 136 aa6.15□□□□□ -1.43
Hps3-201ENSMUST00000012580 Krtap3-1A2A591 98 aa6.14□□□□□ -1.43
Hps3-201ENSMUST00000012580 Crct1Q6PAI5 102 aa6.14□□□□□ -1.43
Hps3-201ENSMUST00000012580 2210017I01RikA0A0A6YVV1 95 aa6.12□□□□□ -1.43
Hps3-201ENSMUST00000012580 HydinQ80W93 5154 aa6.08□□□□□ -1.44
Hps3-201ENSMUST00000012580 Krtap13-1Q8K198 168 aa6.06□□□□□ -1.44
Hps3-201ENSMUST00000012580 Camk2n1Q6QWF9 78 aa6.06□□□□□ -1.44
Hps3-201ENSMUST00000012580 Pkhd1E9PZ36 4059 aa6.02□□□□□ -1.45
Hps3-201ENSMUST00000012580 Pkhd1l1Q80ZA4 4249 aa6.02□□□□□ -1.45
Hps3-201ENSMUST00000012580 Abca13Q5SSE9 5034 aa5.99□□□□□ -1.45
Hps3-201ENSMUST00000012580 Kiaa1109A2AAE1 5005 aa5.97□□□□□ -1.45
Hps3-201ENSMUST00000012580 Lrp2A2ARV4 4660 aa5.94□□□□□ -1.46
Hps3-201ENSMUST00000012580 Gm40193A0A1B0GT39 78 aa5.94□□□□□ -1.46
Hps3-201ENSMUST00000012580 Herc2Q4U2R1 4836 aa5.86□□□□□ -1.47
Hps3-201ENSMUST00000012580 Kmt2cQ8BRH4 4903 aa5.83□□□□□ -1.48
Hps3-201ENSMUST00000012580 Gm19402J3QJV4 266 aa5.83□□□□□ -1.48
Hps3-201ENSMUST00000012580 Krtap7-1Q9D3I6 87 aa5.83□□□□□ -1.48
Hps3-201ENSMUST00000012580 Gm19668J3QMD1 248 aa5.82□□□□□ -1.48
Hps3-201ENSMUST00000012580 Ryr2E9Q401 4966 aaKnown RBP5.81□□□□□ -1.48
Hps3-201ENSMUST00000012580 Krtap4-1Q3UUY3 169 aa5.75□□□□□ -1.49
Hps3-201ENSMUST00000012580 Dnah8Q91XQ0 4731 aa5.74□□□□□ -1.49
Hps3-201ENSMUST00000012580 Gm17402F6Z0L5 76 aa5.67□□□□□ -1.5
Hps3-201ENSMUST00000012580 Dnhd1D3Z2X2 4750 aa5.63□□□□□ -1.51
Hps3-201ENSMUST00000012580 Krtap1-5A2A590 122 aa5.63□□□□□ -1.51
Hps3-201ENSMUST00000012580 Sprr2a3Q4KL71 83 aa5.55□□□□□ -1.52
Hps3-201ENSMUST00000012580 Sprr2a1Q9CQK8 83 aa5.55□□□□□ -1.52
Hps3-201ENSMUST00000012580 PcloQ9QYX7 5068 aa5.54□□□□□ -1.52
Hps3-201ENSMUST00000012580 Tnp1P10856 55 aa5.52□□□□□ -1.53
Hps3-201ENSMUST00000012580 Krtap16-3Q8C1I6 86 aa5.51□□□□□ -1.53
Hps3-201ENSMUST00000012580 LorP18165 486 aa5.43□□□□□ -1.54
Hps3-201ENSMUST00000012580 Krtap1-4Q3V2D6 188 aa5.43□□□□□ -1.54
Hps3-201ENSMUST00000012580 Krtap19-3Q925H6 87 aa5.4□□□□□ -1.54
Hps3-201ENSMUST00000012580 Birc6O88738 4882 aa5.38□□□□□ -1.55
Hps3-201ENSMUST00000012580 Krtap19-1Q925H2 87 aa5.37□□□□□ -1.55
Hps3-201ENSMUST00000012580 Herc1E9PZP8 4859 aa5.37□□□□□ -1.55
Hps3-201ENSMUST00000012580 Ubr4A2AN08 5180 aa5.34□□□□□ -1.55
Hps3-201ENSMUST00000012580 Gm11563B1AQ90 168 aa5.32□□□□□ -1.56
Hps3-201ENSMUST00000012580 Krtap4-7Q9D732 168 aa5.32□□□□□ -1.56
Hps3-201ENSMUST00000012580 Fat4Q2PZL6 4981 aa5.28□□□□□ -1.56
Hps3-201ENSMUST00000012580 Gm11555B1AQ89 175 aa5.28□□□□□ -1.56
Hps3-201ENSMUST00000012580 Krtap12-1Q9Z287 130 aa5.22□□□□□ -1.57
Hps3-201ENSMUST00000012580 ZanO88799 5376 aa5.21□□□□□ -1.58
Hps3-201ENSMUST00000012580 Krtap19-9aF8WH65 55 aa5.21□□□□□ -1.58
Hps3-201ENSMUST00000012580 Lce1jD3YUU5 139 aa5.2□□□□□ -1.58
Hps3-201ENSMUST00000012580 Gm18596A0A1W2P860 280 aa5.18□□□□□ -1.58
Hps3-201ENSMUST00000012580 Lce1mQ9CR91 182 aa5.1□□□□□ -1.59
Hps3-201ENSMUST00000012580 Krtap1-3A2A588 173 aa5.08□□□□□ -1.6
Hps3-201ENSMUST00000012580 Hmcn2A2AJ76 5100 aa5.06□□□□□ -1.6
Hps3-201ENSMUST00000012580 4932415D10RikA0A1W2P6U8 4986 aa5.06□□□□□ -1.6
Hps3-201ENSMUST00000012580 A0A1Y7VJH8 109 aa5.05□□□□□ -1.6
Hps3-201ENSMUST00000012580 Ush2AQ2QI47 5193 aa5.04□□□□□ -1.6
Hps3-201ENSMUST00000012580 Rnf213E9Q555 5152 aaKnown RBP5.03□□□□□ -1.6
Hps3-201ENSMUST00000012580 Krtap17-1A2A5X6 109 aa5.01□□□□□ -1.61
Hps3-201ENSMUST00000012580 Krtap9-5A2A5X3 358 aa4.96□□□□□ -1.62
Hps3-201ENSMUST00000012580 Krtap19-9bQ99NG9 58 aa4.94□□□□□ -1.62
Hps3-201ENSMUST00000012580 Mdn1A2ANY6 5589 aaKnown RBP4.92□□□□□ -1.62
Hps3-201ENSMUST00000012580 Krtap28-10A0A1Y7VP58 119 aa4.84□□□□□ -1.64
Hps3-201ENSMUST00000012580 Krtap8-1O08633 61 aa4.83□□□□□ -1.64
Hps3-201ENSMUST00000012580 Krtap19-2Q925I0 141 aa4.83□□□□□ -1.64
Hps3-201ENSMUST00000012580 Krtap4-2B1AQ85 167 aa4.81□□□□□ -1.64
Hps3-201ENSMUST00000012580 Lce1iQ9D6P5 149 aa4.8□□□□□ -1.64
Hps3-201ENSMUST00000012580 Krtap28-13A0A087WQP5 138 aa4.77□□□□□ -1.65
Hps3-201ENSMUST00000012580 Lce1a2Q9D1K4 149 aa4.77□□□□□ -1.65
Hps3-201ENSMUST00000012580 4933428G20RikQ9D3X4 101 aa4.76□□□□□ -1.65
Hps3-201ENSMUST00000012580 A0A1Y7VLE6 161 aa4.75□□□□□ -1.65
Hps3-201ENSMUST00000012580 Gm9789Q8BIG3 52 aa4.75□□□□□ -1.65
Hps3-201ENSMUST00000012580 Krtap9-3Q3V2C1 136 aa4.73□□□□□ -1.65
Hps3-201ENSMUST00000012580 Gm6358A0A087WPH4 74 aa4.73□□□□□ -1.65
Hps3-201ENSMUST00000012580 A030005K14RikA0A1Y7VNY1 122 aa4.72□□□□□ -1.65
Hps3-201ENSMUST00000012580 Gm7735D3YX18 52 aa4.71□□□□□ -1.66
Hps3-201ENSMUST00000012580 Prm1P02319 51 aa4.67□□□□□ -1.66
Hps3-201ENSMUST00000012580 Mt2P02798 61 aa4.67□□□□□ -1.66
Hps3-201ENSMUST00000012580 2310046K23RikA0A0A6YVW6 87 aa4.65□□□□□ -1.67
Hps3-201ENSMUST00000012580 Lce1hQ9D6R3 140 aa4.62□□□□□ -1.67
Hps3-201ENSMUST00000012580 Gm10272F7CZ33 110 aa4.54□□□□□ -1.68
Hps3-201ENSMUST00000012580 Syne1Q6ZWR6 8799 aa4.53□□□□□ -1.68
Hps3-201ENSMUST00000012580 Gm10061D3Z714 54 aa4.5□□□□□ -1.69
Hps3-201ENSMUST00000012580 Muc16A0A140LJ72 8478 aa4.46□□□□□ -1.69
Hps3-201ENSMUST00000012580 SspoQ8CG65 4998 aa4.46□□□□□ -1.7
Hps3-201ENSMUST00000012580 A030005L19RikA0A1Y7VIU2 113 aa4.45□□□□□ -1.7
Hps3-201ENSMUST00000012580 A0A1Y7VJ07 166 aa4.43□□□□□ -1.7
Hps3-201ENSMUST00000012580 Krtap22-2J3QNX6 67 aa4.41□□□□□ -1.7
Hps3-201ENSMUST00000012580 Lce1dQ9D731 133 aa4.36□□□□□ -1.71
Hps3-201ENSMUST00000012580 Sprr2kO70562 68 aa4.31□□□□□ -1.72
Hps3-201ENSMUST00000012580 Gm7544A0A1Y7VJ58 118 aa4.31□□□□□ -1.72
Hps3-201ENSMUST00000012580 Fsip2A2ARZ3 6995 aa4.3□□□□□ -1.72
Hps3-201ENSMUST00000012580 Gm10100J3QK64 120 aa4.29□□□□□ -1.72
Hps3-201ENSMUST00000012580 A030014E15RikA0A1Y7VJV2 120 aa4.28□□□□□ -1.72
Hps3-201ENSMUST00000012580 Krtap31-1Q9D644 177 aa4.28□□□□□ -1.72
Hps3-201ENSMUST00000012580 Gm11569B1AQB1 180 aa4.27□□□□□ -1.73
Hps3-201ENSMUST00000012580 Muc5bE9Q5I3 4800 aa4.26□□□□□ -1.73
Hps3-201ENSMUST00000012580 Lce3bQ9CQM7 98 aa4.24□□□□□ -1.73
Hps3-201ENSMUST00000012580 Sprr2gO70558 76 aa4.2□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 106.7 ms