RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Dnah1E9Q8T7 4250 aa5.9□□□□□ -1.46
Msh6-201ENSMUST00000005503 Lrp1Q91ZX7 4545 aaKnown RBP5.86□□□□□ -1.47
Msh6-201ENSMUST00000005503 Dync2h1Q45VK7 4306 aa5.85□□□□□ -1.47
Msh6-201ENSMUST00000005503 Dnah7cA0A087WR13 4024 aa5.84□□□□□ -1.47
Msh6-201ENSMUST00000005503 Vps13bQ80TY5 3993 aa5.82□□□□□ -1.48
Msh6-201ENSMUST00000005503 Dync1h1Q9JHU4 4644 aaKnown RBP5.81□□□□□ -1.48
Msh6-201ENSMUST00000005503 Krtap7-1Q9D3I6 87 aa5.77□□□□□ -1.49
Msh6-201ENSMUST00000005503 Fat3Q8BNA6 4555 aa5.77□□□□□ -1.49
Msh6-201ENSMUST00000005503 Mycbp2Q7TPH6 4711 aa5.77□□□□□ -1.49
Msh6-201ENSMUST00000005503 Ryr3A2AGL3 4863 aa5.75□□□□□ -1.49
Msh6-201ENSMUST00000005503 Ryr1E9PZQ0 5035 aa5.75□□□□□ -1.49
Msh6-201ENSMUST00000005503 Fras1Q80T14 4010 aa5.74□□□□□ -1.49
Msh6-201ENSMUST00000005503 Dnah7aE9Q0T8 4024 aa5.72□□□□□ -1.49
Msh6-201ENSMUST00000005503 Gm19402J3QJV4 266 aa5.72□□□□□ -1.49
Msh6-201ENSMUST00000005503 Gm19668J3QMD1 248 aa5.71□□□□□ -1.49
Msh6-201ENSMUST00000005503 SacsQ9JLC8 4582 aa5.71□□□□□ -1.5
Msh6-201ENSMUST00000005503 HydinQ80W93 5154 aa5.65□□□□□ -1.51
Msh6-201ENSMUST00000005503 Fat1A0A1L1SQU7 4645 aa5.61□□□□□ -1.51
Msh6-201ENSMUST00000005503 Sprr2a3Q4KL71 83 aa5.59□□□□□ -1.51
Msh6-201ENSMUST00000005503 Sprr2a1Q9CQK8 83 aa5.59□□□□□ -1.51
Msh6-201ENSMUST00000005503 Krtap1-5A2A590 122 aa5.58□□□□□ -1.52
Msh6-201ENSMUST00000005503 Pkd1O08852 4293 aa5.56□□□□□ -1.52
Msh6-201ENSMUST00000005503 Kiaa1109A2AAE1 5005 aa5.48□□□□□ -1.53
Msh6-201ENSMUST00000005503 Fat2Q5F226 4351 aa5.48□□□□□ -1.53
Msh6-201ENSMUST00000005503 Lrp2A2ARV4 4660 aa5.47□□□□□ -1.53
Msh6-201ENSMUST00000005503 Krtap1-4Q3V2D6 188 aa5.39□□□□□ -1.55
Msh6-201ENSMUST00000005503 Herc2Q4U2R1 4836 aa5.36□□□□□ -1.55
Msh6-201ENSMUST00000005503 LorP18165 486 aa5.29□□□□□ -1.56
Msh6-201ENSMUST00000005503 Dnah8Q91XQ0 4731 aa5.28□□□□□ -1.56
Msh6-201ENSMUST00000005503 Abca13Q5SSE9 5034 aa5.26□□□□□ -1.57
Msh6-201ENSMUST00000005503 Krtap16-3Q8C1I6 86 aa5.26□□□□□ -1.57
Msh6-201ENSMUST00000005503 Krtap19-9aF8WH65 55 aa5.25□□□□□ -1.57
Msh6-201ENSMUST00000005503 Kmt2cQ8BRH4 4903 aa5.23□□□□□ -1.57
Msh6-201ENSMUST00000005503 Pkhd1l1Q80ZA4 4249 aa5.2□□□□□ -1.58
Msh6-201ENSMUST00000005503 Krtap12-1Q9Z287 130 aa5.19□□□□□ -1.58
Msh6-201ENSMUST00000005503 Krtap19-3Q925H6 87 aa5.17□□□□□ -1.58
Msh6-201ENSMUST00000005503 Ryr2E9Q401 4966 aaKnown RBP5.16□□□□□ -1.58
Msh6-201ENSMUST00000005503 4933428G20RikQ9D3X4 101 aa5.16□□□□□ -1.58
Msh6-201ENSMUST00000005503 Krtap19-1Q925H2 87 aa5.12□□□□□ -1.59
Msh6-201ENSMUST00000005503 Pkhd1E9PZ36 4059 aa5.09□□□□□ -1.59
Msh6-201ENSMUST00000005503 Krtap19-9bQ99NG9 58 aa5.07□□□□□ -1.6
Msh6-201ENSMUST00000005503 Dnhd1D3Z2X2 4750 aa5.02□□□□□ -1.61
Msh6-201ENSMUST00000005503 Gm18596A0A1W2P860 280 aa4.97□□□□□ -1.61
Msh6-201ENSMUST00000005503 Gm6358A0A087WPH4 74 aa4.96□□□□□ -1.62
Msh6-201ENSMUST00000005503 PcloQ9QYX7 5068 aa4.95□□□□□ -1.62
Msh6-201ENSMUST00000005503 Lce1jD3YUU5 139 aa4.94□□□□□ -1.62
Msh6-201ENSMUST00000005503 Krtap8-1O08633 61 aa4.86□□□□□ -1.63
Msh6-201ENSMUST00000005503 Krtap9-5A2A5X3 358 aa4.85□□□□□ -1.63
Msh6-201ENSMUST00000005503 Birc6O88738 4882 aa4.82□□□□□ -1.64
Msh6-201ENSMUST00000005503 Lce1mQ9CR91 182 aa4.81□□□□□ -1.64
Msh6-201ENSMUST00000005503 Ubr4A2AN08 5180 aa4.78□□□□□ -1.64
Msh6-201ENSMUST00000005503 Herc1E9PZP8 4859 aa4.77□□□□□ -1.65
Msh6-201ENSMUST00000005503 2310046K23RikA0A0A6YVW6 87 aa4.76□□□□□ -1.65
Msh6-201ENSMUST00000005503 Krtap1-3A2A588 173 aa4.76□□□□□ -1.65
Msh6-201ENSMUST00000005503 Fat4Q2PZL6 4981 aa4.7□□□□□ -1.66
Msh6-201ENSMUST00000005503 Mdn1A2ANY6 5589 aaKnown RBP4.69□□□□□ -1.66
Msh6-201ENSMUST00000005503 Krtap19-2Q925I0 141 aa4.67□□□□□ -1.66
Msh6-201ENSMUST00000005503 ZanO88799 5376 aa4.66□□□□□ -1.66
Msh6-201ENSMUST00000005503 Syne1Q6ZWR6 8799 aa4.62□□□□□ -1.67
Msh6-201ENSMUST00000005503 Mt2P02798 61 aa4.61□□□□□ -1.67
Msh6-201ENSMUST00000005503 4932415D10RikA0A1W2P6U8 4986 aa4.59□□□□□ -1.67
Msh6-201ENSMUST00000005503 Gm10272F7CZ33 110 aa4.59□□□□□ -1.67
Msh6-201ENSMUST00000005503 Ush2AQ2QI47 5193 aa4.56□□□□□ -1.68
Msh6-201ENSMUST00000005503 Krtap17-1A2A5X6 109 aa4.56□□□□□ -1.68
Msh6-201ENSMUST00000005503 Hmcn2A2AJ76 5100 aa4.55□□□□□ -1.68
Msh6-201ENSMUST00000005503 Lce1iQ9D6P5 149 aa4.54□□□□□ -1.68
Msh6-201ENSMUST00000005503 Prm1P02319 51 aa4.53□□□□□ -1.68
Msh6-201ENSMUST00000005503 Gm10100J3QK64 120 aa4.51□□□□□ -1.69
Msh6-201ENSMUST00000005503 Lce1a2Q9D1K4 149 aa4.5□□□□□ -1.69
Msh6-201ENSMUST00000005503 Rnf213E9Q555 5152 aaKnown RBP4.49□□□□□ -1.69
Msh6-201ENSMUST00000005503 Krtap9-3Q3V2C1 136 aa4.49□□□□□ -1.69
Msh6-201ENSMUST00000005503 Gm7735D3YX18 52 aa4.45□□□□□ -1.7
Msh6-201ENSMUST00000005503 Gm9789Q8BIG3 52 aa4.45□□□□□ -1.7
Msh6-201ENSMUST00000005503 Krtap22-2J3QNX6 67 aa4.43□□□□□ -1.7
Msh6-201ENSMUST00000005503 Lce1hQ9D6R3 140 aa4.41□□□□□ -1.7
Msh6-201ENSMUST00000005503 Lce3bQ9CQM7 98 aa4.4□□□□□ -1.7
Msh6-201ENSMUST00000005503 Gm10142J3KMP7 120 aa4.35□□□□□ -1.71
Msh6-201ENSMUST00000005503 Muc16A0A140LJ72 8478 aa4.33□□□□□ -1.72
Msh6-201ENSMUST00000005503 Lce3cQ91V05 98 aa4.29□□□□□ -1.72
Msh6-201ENSMUST00000005503 Gm10061D3Z714 54 aa4.28□□□□□ -1.72
Msh6-201ENSMUST00000005503 Sprr2gO70558 76 aa4.27□□□□□ -1.73
Msh6-201ENSMUST00000005503 Sprr2kO70562 68 aa4.25□□□□□ -1.73
Msh6-201ENSMUST00000005503 Lce3eF8VQJ0 98 aa4.21□□□□□ -1.73
Msh6-201ENSMUST00000005503 Lce3fQ6PAI4 98 aa4.21□□□□□ -1.73
Msh6-201ENSMUST00000005503 Lce3dE9Q8V1 98 aa4.19□□□□□ -1.74
Msh6-201ENSMUST00000005503 Lce1dQ9D731 133 aa4.17□□□□□ -1.74
Msh6-201ENSMUST00000005503 Gm38119A0A0A6YX29 146 aa4.11□□□□□ -1.75
Msh6-201ENSMUST00000005503 Gm11938Q9D3H4 131 aa4.09□□□□□ -1.75
Msh6-201ENSMUST00000005503 Gm11569B1AQB1 180 aa4.07□□□□□ -1.76
Msh6-201ENSMUST00000005503 Lce3aQ497I5 98 aa4.05□□□□□ -1.76
Msh6-201ENSMUST00000005503 Krtap19-4Q925H7 84 aa4.01□□□□□ -1.77
Msh6-201ENSMUST00000005503 Sprr2dO70555 85 aa3.99□□□□□ -1.77
Msh6-201ENSMUST00000005503 Lce1eQ9D139 143 aa3.98□□□□□ -1.77
Msh6-201ENSMUST00000005503 Fsip2A2ARZ3 6995 aa3.97□□□□□ -1.77
Msh6-201ENSMUST00000005503 Lce1gQ9D195 139 aa3.97□□□□□ -1.77
Msh6-201ENSMUST00000005503 SspoQ8CG65 4998 aa3.95□□□□□ -1.78
Msh6-201ENSMUST00000005503 Lce1cQ9D1C5 147 aa3.94□□□□□ -1.78
Msh6-201ENSMUST00000005503 Muc5bE9Q5I3 4800 aa3.93□□□□□ -1.78
Msh6-201ENSMUST00000005503 Lce1bQ9D149 137 aa3.89□□□□□ -1.79
Msh6-201ENSMUST00000005503 Lce1fB9EJP6 147 aa3.89□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 113.6 ms