RNA–Protein interactions for RNA: ENSMUST00000002198.3

Sf3a1-201, Transcript of Splicing factor 3A subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3a1, Length 4,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1-201ENSMUST00000002198 Hectd4E9Q2E4 4418 aa6.5□□□□□ -1.37
Sf3a1-201ENSMUST00000002198 Lrp1bQ9JI18 4599 aa6.47□□□□□ -1.37
Sf3a1-201ENSMUST00000002198 Gm10318A0A1W2P728 225 aa6.43□□□□□ -1.38
Sf3a1-201ENSMUST00000002198 Fras1Q80T14 4010 aa6.43□□□□□ -1.38
Sf3a1-201ENSMUST00000002198 Dnah7cA0A087WR13 4024 aa6.41□□□□□ -1.38
Sf3a1-201ENSMUST00000002198 Ndufaf8A2AMZ4 74 aa6.41□□□□□ -1.38
Sf3a1-201ENSMUST00000002198 Fat1A0A1L1SQU7 4645 aa6.39□□□□□ -1.39
Sf3a1-201ENSMUST00000002198 Sprr2a3Q4KL71 83 aa6.39□□□□□ -1.39
Sf3a1-201ENSMUST00000002198 Sprr2a1Q9CQK8 83 aa6.39□□□□□ -1.39
Sf3a1-201ENSMUST00000002198 Dnah8Q91XQ0 4731 aa6.38□□□□□ -1.39
Sf3a1-201ENSMUST00000002198 Dnah7aE9Q0T8 4024 aa6.37□□□□□ -1.39
Sf3a1-201ENSMUST00000002198 Csmd3Q80T79 3707 aa6.35□□□□□ -1.39
Sf3a1-201ENSMUST00000002198 Ryr2E9Q401 4966 aaKnown RBP6.34□□□□□ -1.39
Sf3a1-201ENSMUST00000002198 Ryr1E9PZQ0 5035 aa6.32□□□□□ -1.4
Sf3a1-201ENSMUST00000002198 Gm18596A0A1W2P860 280 aa6.32□□□□□ -1.4
Sf3a1-201ENSMUST00000002198 Prm2P07978 107 aa6.31□□□□□ -1.4
Sf3a1-201ENSMUST00000002198 Lce1mQ9CR91 182 aa6.31□□□□□ -1.4
Sf3a1-201ENSMUST00000002198 Krtap1-4Q3V2D6 188 aa6.31□□□□□ -1.4
Sf3a1-201ENSMUST00000002198 Fat3Q8BNA6 4555 aa6.3□□□□□ -1.4
Sf3a1-201ENSMUST00000002198 Krtap19-9aF8WH65 55 aa6.26□□□□□ -1.41
Sf3a1-201ENSMUST00000002198 Ryr3A2AGL3 4863 aa6.24□□□□□ -1.41
Sf3a1-201ENSMUST00000002198 Fat2Q5F226 4351 aa6.23□□□□□ -1.41
Sf3a1-201ENSMUST00000002198 Gm19402J3QJV4 266 aa6.22□□□□□ -1.41
Sf3a1-201ENSMUST00000002198 Pkhd1l1Q80ZA4 4249 aa6.19□□□□□ -1.42
Sf3a1-201ENSMUST00000002198 Mycbp2Q7TPH6 4711 aa6.13□□□□□ -1.43
Sf3a1-201ENSMUST00000002198 Prm1P02319 51 aa6.11□□□□□ -1.43
Sf3a1-201ENSMUST00000002198 LorP18165 486 aa6.11□□□□□ -1.43
Sf3a1-201ENSMUST00000002198 Krtap12-1Q9Z287 130 aa6.09□□□□□ -1.43
Sf3a1-201ENSMUST00000002198 Krtap16-3Q8C1I6 86 aa6.07□□□□□ -1.44
Sf3a1-201ENSMUST00000002198 Dnhd1D3Z2X2 4750 aa6.06□□□□□ -1.44
Sf3a1-201ENSMUST00000002198 Krtap19-3Q925H6 87 aa6.04□□□□□ -1.44
Sf3a1-201ENSMUST00000002198 Herc2Q4U2R1 4836 aa6.02□□□□□ -1.45
Sf3a1-201ENSMUST00000002198 Krtap19-1Q925H2 87 aa6.02□□□□□ -1.45
Sf3a1-201ENSMUST00000002198 Gm9112A2AI92 75 aa5.98□□□□□ -1.45
Sf3a1-201ENSMUST00000002198 Kiaa1109A2AAE1 5005 aa5.97□□□□□ -1.45
Sf3a1-201ENSMUST00000002198 Lrp1Q91ZX7 4545 aaKnown RBP5.96□□□□□ -1.45
Sf3a1-201ENSMUST00000002198 Krtap19-9bQ99NG9 58 aa5.94□□□□□ -1.46
Sf3a1-201ENSMUST00000002198 Birc6O88738 4882 aa5.92□□□□□ -1.46
Sf3a1-201ENSMUST00000002198 Vps13bQ80TY5 3993 aa5.91□□□□□ -1.46
Sf3a1-201ENSMUST00000002198 Krtap7-1Q9D3I6 87 aa5.9□□□□□ -1.46
Sf3a1-201ENSMUST00000002198 4933428G20RikQ9D3X4 101 aa5.89□□□□□ -1.47
Sf3a1-201ENSMUST00000002198 Gm7735D3YX18 52 aa5.87□□□□□ -1.47
Sf3a1-201ENSMUST00000002198 Herc1E9PZP8 4859 aa5.86□□□□□ -1.47
Sf3a1-201ENSMUST00000002198 Pkhd1E9PZ36 4059 aa5.84□□□□□ -1.47
Sf3a1-201ENSMUST00000002198 Gm9789Q8BIG3 52 aa5.84□□□□□ -1.47
Sf3a1-201ENSMUST00000002198 Krtap8-1O08633 61 aa5.8□□□□□ -1.48
Sf3a1-201ENSMUST00000002198 Krtap1-3A2A588 173 aa5.73□□□□□ -1.49
Sf3a1-201ENSMUST00000002198 Lrp2A2ARV4 4660 aa5.72□□□□□ -1.49
Sf3a1-201ENSMUST00000002198 Krtap9-5A2A5X3 358 aa5.67□□□□□ -1.5
Sf3a1-201ENSMUST00000002198 Kmt2cQ8BRH4 4903 aa5.66□□□□□ -1.5
Sf3a1-201ENSMUST00000002198 HydinQ80W93 5154 aa5.57□□□□□ -1.52
Sf3a1-201ENSMUST00000002198 Krtap19-2Q925I0 141 aa5.52□□□□□ -1.53
Sf3a1-201ENSMUST00000002198 Abca13Q5SSE9 5034 aa5.5□□□□□ -1.53
Sf3a1-201ENSMUST00000002198 Lce1jD3YUU5 139 aa5.41□□□□□ -1.54
Sf3a1-201ENSMUST00000002198 Gm6358A0A087WPH4 74 aa5.4□□□□□ -1.54
Sf3a1-201ENSMUST00000002198 Gm10061D3Z714 54 aa5.4□□□□□ -1.55
Sf3a1-201ENSMUST00000002198 2310046K23RikA0A0A6YVW6 87 aa5.37□□□□□ -1.55
Sf3a1-201ENSMUST00000002198 Mt2P02798 61 aa5.37□□□□□ -1.55
Sf3a1-201ENSMUST00000002198 Krtap22-2J3QNX6 67 aa5.31□□□□□ -1.56
Sf3a1-201ENSMUST00000002198 Sprr2kO70562 68 aa5.28□□□□□ -1.56
Sf3a1-201ENSMUST00000002198 PcloQ9QYX7 5068 aa5.25□□□□□ -1.57
Sf3a1-201ENSMUST00000002198 4932415D10RikA0A1W2P6U8 4986 aa5.19□□□□□ -1.58
Sf3a1-201ENSMUST00000002198 ZanO88799 5376 aa5.17□□□□□ -1.58
Sf3a1-201ENSMUST00000002198 Gm11569B1AQB1 180 aa5.16□□□□□ -1.58
Sf3a1-201ENSMUST00000002198 Fat4Q2PZL6 4981 aa5.1□□□□□ -1.59
Sf3a1-201ENSMUST00000002198 Lce3bQ9CQM7 98 aa5.07□□□□□ -1.6
Sf3a1-201ENSMUST00000002198 Lce1iQ9D6P5 149 aa5.06□□□□□ -1.6
Sf3a1-201ENSMUST00000002198 Gm10272F7CZ33 110 aa5.05□□□□□ -1.6
Sf3a1-201ENSMUST00000002198 Sprr2gO70558 76 aa5.04□□□□□ -1.6
Sf3a1-201ENSMUST00000002198 Ush2AQ2QI47 5193 aa5.02□□□□□ -1.61
Sf3a1-201ENSMUST00000002198 Lce1a2Q9D1K4 149 aa4.97□□□□□ -1.61
Sf3a1-201ENSMUST00000002198 Rnf213E9Q555 5152 aaKnown RBP4.92□□□□□ -1.62
Sf3a1-201ENSMUST00000002198 Lce3cQ91V05 98 aa4.88□□□□□ -1.63
Sf3a1-201ENSMUST00000002198 Krtap9-3Q3V2C1 136 aa4.87□□□□□ -1.63
Sf3a1-201ENSMUST00000002198 Ubr4A2AN08 5180 aa4.86□□□□□ -1.63
Sf3a1-201ENSMUST00000002198 Hmcn2A2AJ76 5100 aa4.83□□□□□ -1.64
Sf3a1-201ENSMUST00000002198 Gm10100J3QK64 120 aa4.81□□□□□ -1.64
Sf3a1-201ENSMUST00000002198 Lce3dE9Q8V1 98 aa4.79□□□□□ -1.64
Sf3a1-201ENSMUST00000002198 Sprr2iO70560 76 aa4.79□□□□□ -1.64
Sf3a1-201ENSMUST00000002198 Gm38119A0A0A6YX29 146 aa4.78□□□□□ -1.64
Sf3a1-201ENSMUST00000002198 Muc5bE9Q5I3 4800 aa4.77□□□□□ -1.65
Sf3a1-201ENSMUST00000002198 Krtap4-2B1AQ85 167 aa4.77□□□□□ -1.65
Sf3a1-201ENSMUST00000002198 Lce1gQ9D195 139 aa4.77□□□□□ -1.65
Sf3a1-201ENSMUST00000002198 Lce3eF8VQJ0 98 aa4.76□□□□□ -1.65
Sf3a1-201ENSMUST00000002198 Lce3fQ6PAI4 98 aa4.76□□□□□ -1.65
Sf3a1-201ENSMUST00000002198 Krtap19-4Q925H7 84 aa4.76□□□□□ -1.65
Sf3a1-201ENSMUST00000002198 SspoQ8CG65 4998 aa4.75□□□□□ -1.65
Sf3a1-201ENSMUST00000002198 Gm10142J3KMP7 120 aa4.72□□□□□ -1.65
Sf3a1-201ENSMUST00000002198 Krtap4-6Q3V4B7 195 aa4.7□□□□□ -1.66
Sf3a1-201ENSMUST00000002198 Krtap17-1A2A5X6 109 aa4.67□□□□□ -1.66
Sf3a1-201ENSMUST00000002198 Lce3aQ497I5 98 aa4.62□□□□□ -1.67
Sf3a1-201ENSMUST00000002198 Lce1hQ9D6R3 140 aa4.59□□□□□ -1.67
Sf3a1-201ENSMUST00000002198 Mt4P47945 62 aa4.59□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Krtap4-1Q3UUY3 169 aa4.58□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Lce1fB9EJP6 147 aa4.58□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Lce1cQ9D1C5 147 aa4.58□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Lce1lQ9D1G7 135 aa4.58□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Lce1dQ9D731 133 aa4.58□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Gm11596B1AQB0 205 aa4.57□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Sprr2dO70555 85 aa4.56□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms