RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A YDR131CQ03899 556 aa8.27□□□□□ -1.09
TGA1tA(UGC)A YMR114CQ04471 368 aaKnown RBP8.27□□□□□ -1.09
TGA1tA(UGC)A SML1Q04964 104 aa8.27□□□□□ -1.09
TGA1tA(UGC)A YPR114WQ06107 315 aa8.27□□□□□ -1.09
TGA1tA(UGC)A AAD15Q08361 143 aa8.27□□□□□ -1.09
TGA1tA(UGC)A NAG1Q8TGN9 163 aa8.27□□□□□ -1.09
TGA1tA(UGC)A AI5_ALPHAQ9ZZX1 630 aa8.27□□□□□ -1.09
TGA1tA(UGC)A SCH9P11792 824 aaKnown RBP8.26□□□□□ -1.09
TGA1tA(UGC)A CHL1P22516 861 aaPredicted RBP8.26□□□□□ -1.09
TGA1tA(UGC)A TSR4P25040 408 aa8.26□□□□□ -1.09
TGA1tA(UGC)A UTR2P32623 467 aa8.26□□□□□ -1.09
TGA1tA(UGC)A MRS6P32864 603 aaKnown RBP8.26□□□□□ -1.09
TGA1tA(UGC)A YHR078WP38799 552 aa8.26□□□□□ -1.09
TGA1tA(UGC)A YMR134WP40207 237 aa8.26□□□□□ -1.09
TGA1tA(UGC)A REF2P42073 533 aaPredicted RBP8.26□□□□□ -1.09
TGA1tA(UGC)A ROK1P45818 564 aaPredicted RBP8.26□□□□□ -1.09
TGA1tA(UGC)A COG1P53079 417 aa8.26□□□□□ -1.09
TGA1tA(UGC)A TIM13P53299 105 aa8.26□□□□□ -1.09
TGA1tA(UGC)A MSH6Q03834 1242 aa8.26□□□□□ -1.09
TGA1tA(UGC)A SFI1Q12369 946 aa8.26□□□□□ -1.09
TGA1tA(UGC)A YLR149CQ99296 730 aa8.26□□□□□ -1.09
TGA1tA(UGC)A YOR338WQ99326 363 aa8.26□□□□□ -1.09
TGA1tA(UGC)A Q0182Q9ZZW1 134 aa8.26□□□□□ -1.09
TGA1tA(UGC)A MPH2P0CD99 609 aa8.25□□□□□ -1.09
TGA1tA(UGC)A CLN1P20437 546 aa8.25□□□□□ -1.09
TGA1tA(UGC)A CIN8P27895 1000 aa8.25□□□□□ -1.09
TGA1tA(UGC)A SLX5P32828 619 aaKnown RBP8.25□□□□□ -1.09
TGA1tA(UGC)A SCD5P34758 872 aa8.25□□□□□ -1.09
TGA1tA(UGC)A YKL151CP36059 337 aa8.25□□□□□ -1.09
TGA1tA(UGC)A MSG5P38590 489 aa8.25□□□□□ -1.09
TGA1tA(UGC)A CKB2P38930 258 aa8.25□□□□□ -1.09
TGA1tA(UGC)A CAJ1P39101 391 aa8.25□□□□□ -1.09
TGA1tA(UGC)A IML2P47031 731 aa8.25□□□□□ -1.09
TGA1tA(UGC)A JSN1P47135 1091 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
TGA1tA(UGC)A YJR124CP47159 448 aa8.25□□□□□ -1.09
TGA1tA(UGC)A YPL113CQ02961 396 aa8.25□□□□□ -1.09
TGA1tA(UGC)A OPI10Q08202 246 aa8.25□□□□□ -1.09
TGA1tA(UGC)A MCM16Q12262 181 aa8.25□□□□□ -1.09
TGA1tA(UGC)A PMA2P19657 947 aa8.24□□□□□ -1.09
TGA1tA(UGC)A BRF1P29056 596 aa8.24□□□□□ -1.09
TGA1tA(UGC)A AEP1P32493 518 aa8.24□□□□□ -1.09
TGA1tA(UGC)A GCD6P32501 712 aaKnown RBP8.24□□□□□ -1.09
TGA1tA(UGC)A MFT1P33441 392 aaKnown RBP8.24□□□□□ -1.09
TGA1tA(UGC)A PHO11P35842 467 aa8.24□□□□□ -1.09
TGA1tA(UGC)A PHO12P38693 467 aa8.24□□□□□ -1.09
TGA1tA(UGC)A SMF1P38925 575 aa8.24□□□□□ -1.09
TGA1tA(UGC)A TIF34P40217 347 aaKnown RBP8.24□□□□□ -1.09
TGA1tA(UGC)A DAN4P47179 1161 aa8.24□□□□□ -1.09
TGA1tA(UGC)A COG7P53195 279 aa8.24□□□□□ -1.09
TGA1tA(UGC)A SIW14P53965 281 aa8.24□□□□□ -1.09
TGA1tA(UGC)A YDR132CQ03900 495 aa8.24□□□□□ -1.09
TGA1tA(UGC)A ECI1Q05871 280 aa8.24□□□□□ -1.09
TGA1tA(UGC)A AIM41Q12032 185 aa8.24□□□□□ -1.09
TGA1tA(UGC)A GNT1Q12096 491 aa8.24□□□□□ -1.09
TGA1tA(UGC)A HFA1P32874 2273 aa8.24□□□□□ -1.09
TGA1tA(UGC)A IMA3P0CW40 589 aa8.23□□□□□ -1.09
TGA1tA(UGC)A IMA4P0CW41 589 aa8.23□□□□□ -1.09
TGA1tA(UGC)A GAL11P19659 1081 aa8.23□□□□□ -1.09
TGA1tA(UGC)A SIP4P46954 829 aa8.23□□□□□ -1.09
TGA1tA(UGC)A MNN10P50108 393 aaKnown RBP8.23□□□□□ -1.09
TGA1tA(UGC)A CWC22P53333 577 aaKnown RBP8.23□□□□□ -1.09
TGA1tA(UGC)A VAC7P53950 1165 aa8.23□□□□□ -1.09
TGA1tA(UGC)A YMR160WQ03823 816 aa8.23□□□□□ -1.09
TGA1tA(UGC)A LDB18Q07887 179 aa8.23□□□□□ -1.09
TGA1tA(UGC)A IMA2Q08295 589 aa8.23□□□□□ -1.09
TGA1tA(UGC)A SRO7Q12038 1033 aa8.23□□□□□ -1.09
TGA1tA(UGC)A FRT1Q99332 602 aa8.23□□□□□ -1.09
TGA1tA(UGC)A ERR1P0CX10 437 aa8.22□□□□□ -1.09
TGA1tA(UGC)A ERR2P0CX11 437 aa8.22□□□□□ -1.09
TGA1tA(UGC)A PET123P17558 318 aa8.22□□□□□ -1.09
TGA1tA(UGC)A RBK1P25332 333 aa8.22□□□□□ -1.09
TGA1tA(UGC)A GCG1P32656 232 aaKnown RBP8.22□□□□□ -1.09
TGA1tA(UGC)A TAE1P38340 232 aa8.22□□□□□ -1.09
TGA1tA(UGC)A YPT35P38815 214 aaKnown RBP8.22□□□□□ -1.09
TGA1tA(UGC)A TIM17P39515 158 aa8.22□□□□□ -1.09
TGA1tA(UGC)A ERR3P42222 437 aa8.22□□□□□ -1.09
TGA1tA(UGC)A NMD5P46970 1048 aa8.22□□□□□ -1.09
TGA1tA(UGC)A RPC17P47076 161 aa8.22□□□□□ -1.09
TGA1tA(UGC)A PCL10P53124 433 aa8.22□□□□□ -1.09
TGA1tA(UGC)A SPC105P53148 917 aa8.22□□□□□ -1.09
TGA1tA(UGC)A YEL077CQ3E7X8 1277 aa8.22□□□□□ -1.09
TGA1tA(UGC)A YML002WP0CF17 737 aa8.21□□□□□ -1.1
TGA1tA(UGC)A CDC24P11433 854 aaPredicted RBP8.21□□□□□ -1.1
TGA1tA(UGC)A EMC1P25574 760 aa8.21□□□□□ -1.1
TGA1tA(UGC)A RGD2P43556 714 aa8.21□□□□□ -1.1
TGA1tA(UGC)A SUM1P46676 1062 aa8.21□□□□□ -1.1
TGA1tA(UGC)A NBP35P52920 328 aa8.21□□□□□ -1.1
TGA1tA(UGC)A SNO2P53823 222 aa8.21□□□□□ -1.1
TGA1tA(UGC)A CDC14Q00684 551 aa8.21□□□□□ -1.1
TGA1tA(UGC)A REG1Q00816 1014 aa8.21□□□□□ -1.1
TGA1tA(UGC)A NUP100Q02629 959 aa8.21□□□□□ -1.1
TGA1tA(UGC)A YMR178WQ03219 274 aaKnown RBP8.21□□□□□ -1.1
TGA1tA(UGC)A PPN1Q04119 674 aa8.21□□□□□ -1.1
TGA1tA(UGC)A URH1Q04179 340 aa8.21□□□□□ -1.1
TGA1tA(UGC)A EAF1Q06337 982 aa8.21□□□□□ -1.1
TGA1tA(UGC)A SLD7Q08457 257 aa8.21□□□□□ -1.1
TGA1tA(UGC)A QCR6P00127 147 aa8.2□□□□□ -1.1
TGA1tA(UGC)A DCC1P25559 380 aa8.2□□□□□ -1.1
TGA1tA(UGC)A SMI1P32566 505 aa8.2□□□□□ -1.1
TGA1tA(UGC)A GND1P38720 489 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms