RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	SPE1	P08432	466 aa		4.89	□□□□□ -1.63
snR17b	snR17b	HMG2	P12684	1045 aa		4.89	□□□□□ -1.63
snR17b	snR17b	FAR1	P21268	830 aa		4.89	□□□□□ -1.63
snR17b	snR17b	MSH2	P25847	964 aa		4.89	□□□□□ -1.63
snR17b	snR17b	CMK1	P27466	446 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	SBA1	P28707	216 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	URA10	P30402	227 aa		4.89	□□□□□ -1.63
snR17b	snR17b	SEC1	P30619	724 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	PHA2	P32452	334 aa		4.89	□□□□□ -1.63
snR17b	snR17b	AEP1	P32493	518 aa		4.89	□□□□□ -1.63
snR17b	snR17b	DOM34	P33309	386 aa		4.89	□□□□□ -1.63
snR17b	snR17b	WHI3	P34761	661 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	PTC1	P35182	281 aa		4.89	□□□□□ -1.63
snR17b	snR17b	VPS21	P36017	210 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	EAP1	P36041	632 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	RDH54	P38086	958 aa		4.89	□□□□□ -1.63
snR17b	snR17b	SWC5	P38326	303 aa		4.89	□□□□□ -1.63
snR17b	snR17b	GDH3	P39708	457 aa		4.89	□□□□□ -1.63
snR17b	snR17b	BOL3	P39724	118 aa		4.89	□□□□□ -1.63
snR17b	snR17b	DLD3	P39976	496 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	SNZ3	P43545	298 aa		4.89	□□□□□ -1.63
snR17b	snR17b	AGP3	P43548	558 aa		4.89	□□□□□ -1.63
snR17b	snR17b	AVT1	P47082	602 aa		4.89	□□□□□ -1.63
snR17b	snR17b	PEX8	P53248	589 aa		4.89	□□□□□ -1.63
snR17b	snR17b	COP1	P53622	1201 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	SNZ2	P53824	298 aa		4.89	□□□□□ -1.63
snR17b	snR17b	HXT15	P54854	567 aa		4.89	□□□□□ -1.63
snR17b	snR17b	GPD1	Q00055	391 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	CDC55	Q00362	526 aa		4.89	□□□□□ -1.63
snR17b	snR17b	YMR099C	Q03161	297 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	YMR160W	Q03823	816 aa		4.89	□□□□□ -1.63
snR17b	snR17b	TAF11	Q04226	346 aa		4.89	□□□□□ -1.63
snR17b	snR17b	URC2	Q04411	772 aa		4.89	□□□□□ -1.63
snR17b	snR17b	REH1	Q06709	432 aa		4.89	□□□□□ -1.63
snR17b	snR17b	BRE4	Q07660	1125 aa		4.89	□□□□□ -1.63
snR17b	snR17b	GPI13	Q07830	1017 aa		4.89	□□□□□ -1.63
snR17b	snR17b	RSB1	Q08417	382 aa		4.89	□□□□□ -1.63
snR17b	snR17b	RSA1	Q08932	381 aa		4.89	□□□□□ -1.63
snR17b	snR17b	RCN2	Q12044	265 aa		4.89	□□□□□ -1.63
snR17b	snR17b	YRR1	Q12172	810 aa		4.89	□□□□□ -1.63
snR17b	snR17b	YAH1	Q12184	172 aa	Known RBP	4.89	□□□□□ -1.63
snR17b	snR17b	YMR030W-A	Q3E760	96 aa		4.89	□□□□□ -1.63
snR17b	snR17b	MET17	P06106	444 aa		4.88	□□□□□ -1.63
snR17b	snR17b	RHO2	P06781	192 aa		4.88	□□□□□ -1.63
snR17b	snR17b	MRP13	P12686	339 aa		4.88	□□□□□ -1.63
snR17b	snR17b	FBA1	P14540	359 aa	Known RBP	4.88	□□□□□ -1.63
snR17b	snR17b	PHO81	P17442	1178 aa		4.88	□□□□□ -1.63
snR17b	snR17b	COX11	P19516	300 aa	Known RBP	4.88	□□□□□ -1.63
snR17b	snR17b	VPS3	P23643	1011 aa		4.88	□□□□□ -1.63
snR17b	snR17b	TSR4	P25040	408 aa		4.88	□□□□□ -1.63
snR17b	snR17b	YCR016W	P25617	290 aa	Known RBP	4.88	□□□□□ -1.63
snR17b	snR17b	ATP7	P30902	174 aa		4.88	□□□□□ -1.63
snR17b	snR17b	VMA6	P32366	345 aa	Known RBP	4.88	□□□□□ -1.63
snR17b	snR17b	HXT3	P32466	567 aa	Known RBP	4.88	□□□□□ -1.63
snR17b	snR17b	NUP2	P32499	720 aa		4.88	□□□□□ -1.63
snR17b	snR17b	APN2	P38207	520 aa		4.88	□□□□□ -1.63
snR17b	snR17b	TOS1	P38288	455 aa		4.88	□□□□□ -1.63
snR17b	snR17b	ATG12	P38316	186 aa		4.88	□□□□□ -1.63
snR17b	snR17b	CYC2	P38909	366 aa		4.88	□□□□□ -1.63
snR17b	snR17b	YIL054W	P40524	105 aa		4.88	□□□□□ -1.63
snR17b	snR17b	ZAP1	P47043	880 aa		4.88	□□□□□ -1.63
snR17b	snR17b	CCT8	P47079	568 aa	Known RBP	4.88	□□□□□ -1.63
snR17b	snR17b	MON1	P53129	644 aa		4.88	□□□□□ -1.63
snR17b	snR17b	LIF1	P53150	421 aa		4.88	□□□□□ -1.63
snR17b	snR17b	ARC35	P53731	342 aa	Known RBP	4.88	□□□□□ -1.63
snR17b	snR17b	ELP3	Q02908	557 aa	Known RBP	4.88	□□□□□ -1.63
snR17b	snR17b	RSN1	Q03516	953 aa		4.88	□□□□□ -1.63
snR17b	snR17b	TRS130	Q03660	1102 aa		4.88	□□□□□ -1.63
snR17b	snR17b	GMC2	Q06201	188 aa		4.88	□□□□□ -1.63
snR17b	snR17b	FMP45	Q07651	309 aa		4.88	□□□□□ -1.63
snR17b	snR17b	YPL191C	Q08930	360 aa		4.88	□□□□□ -1.63
snR17b	snR17b	FLC1	Q08967	793 aa		4.88	□□□□□ -1.63
snR17b	snR17b	ULA1	Q12059	462 aa		4.88	□□□□□ -1.63
snR17b	snR17b	GIS3	Q12418	502 aa		4.88	□□□□□ -1.63
snR17b	snR17b	YBL113C	Q7M4S9	792 aa		4.88	□□□□□ -1.63
snR17b	snR17b	ATP6	P00854	259 aa		4.87	□□□□□ -1.63
snR17b	snR17b	RPL6B	P05739	176 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	PUT2	P07275	575 aa		4.87	□□□□□ -1.63
snR17b	snR17b	BCY1	P07278	416 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	MSS18	P08593	268 aa		4.87	□□□□□ -1.63
snR17b	snR17b	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
snR17b	snR17b	CBS2	P14905	389 aa		4.87	□□□□□ -1.63
snR17b	snR17b	HSC82	P15108	705 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	IDI1	P15496	288 aa		4.87	□□□□□ -1.63
snR17b	snR17b	CMK2	P22517	447 aa		4.87	□□□□□ -1.63
snR17b	snR17b	RVS161	P25343	265 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	GID7	P25569	745 aa		4.87	□□□□□ -1.63
snR17b	snR17b	HSP30	P25619	332 aa		4.87	□□□□□ -1.63
snR17b	snR17b	HRR25	P29295	494 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	DAL1	P32375	460 aa		4.87	□□□□□ -1.63
snR17b	snR17b	COT1	P32798	439 aa		4.87	□□□□□ -1.63
snR17b	snR17b	SLX5	P32828	619 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	RPS0A	P32905	252 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	DUR3	P33413	735 aa		4.87	□□□□□ -1.63
snR17b	snR17b	RFS1	P38234	210 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	OTU2	P38747	307 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
snR17b	snR17b	AVT2	P39981	480 aa		4.87	□□□□□ -1.63
snR17b	snR17b	KRE29	P40026	464 aa		4.87	□□□□□ -1.63
snR17b	snR17b	FCY21	P40039	528 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms