RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C ECM10P39987 644 aa5.4□□□□□ -1.55
RAT1YOR048C DIM1P41819 318 aaKnown RBP5.4□□□□□ -1.55
RAT1YOR048C ERR3P42222 437 aa5.4□□□□□ -1.55
RAT1YOR048C HLJ1P48353 224 aa5.4□□□□□ -1.55
RAT1YOR048C MND1P53102 219 aa5.4□□□□□ -1.55
RAT1YOR048C YNL018CP53976 612 aa5.4□□□□□ -1.55
RAT1YOR048C SLG1P54867 378 aa5.4□□□□□ -1.55
RAT1YOR048C YPQ2Q06328 317 aa5.4□□□□□ -1.55
RAT1YOR048C IMA2Q08295 589 aa5.4□□□□□ -1.55
RAT1YOR048C UBX3Q12229 455 aa5.4□□□□□ -1.55
RAT1YOR048C GIS3Q12418 502 aa5.4□□□□□ -1.55
RAT1YOR048C CSR2Q12734 1121 aa5.4□□□□□ -1.55
RAT1YOR048C ARG81P05085 880 aa5.4□□□□□ -1.55
RAT1YOR048C RPS3P05750 240 aaKnown RBP5.4□□□□□ -1.55
RAT1YOR048C CNA1P23287 553 aa5.4□□□□□ -1.55
RAT1YOR048C SAT4P25333 603 aaKnown RBP5.4□□□□□ -1.55
RAT1YOR048C SGF29P25554 259 aa5.4□□□□□ -1.55
RAT1YOR048C KIP2P28743 706 aa5.4□□□□□ -1.55
RAT1YOR048C OTU2P38747 307 aaKnown RBP5.4□□□□□ -1.55
RAT1YOR048C NUP84P52891 726 aa5.4□□□□□ -1.55
RAT1YOR048C SHE10P53075 577 aa5.4□□□□□ -1.55
RAT1YOR048C YNL115CP53925 644 aa5.4□□□□□ -1.55
RAT1YOR048C STP1Q00947 519 aa5.4□□□□□ -1.55
RAT1YOR048C ARA2Q04212 335 aa5.4□□□□□ -1.55
RAT1YOR048C LOT6Q07923 191 aa5.4□□□□□ -1.55
RAT1YOR048C YEH2Q07950 538 aa5.4□□□□□ -1.55
RAT1YOR048C SNX3Q08826 162 aaKnown RBP5.4□□□□□ -1.55
RAT1YOR048C NSP1P14907 823 aaKnown RBP5.39□□□□□ -1.55
RAT1YOR048C COX11P19516 300 aaKnown RBP5.39□□□□□ -1.55
RAT1YOR048C RAD27P26793 382 aa5.39□□□□□ -1.55
RAT1YOR048C RME1P32338 300 aaKnown RBP5.39□□□□□ -1.55
RAT1YOR048C SKG6P32900 734 aaPredicted RBP5.39□□□□□ -1.55
RAT1YOR048C SET3P36124 751 aa5.39□□□□□ -1.55
RAT1YOR048C CTP1P38152 299 aa5.39□□□□□ -1.55
RAT1YOR048C GIP4P39732 760 aa5.39□□□□□ -1.55
RAT1YOR048C RFX1P48743 811 aa5.39□□□□□ -1.55
RAT1YOR048C BUD32P53323 261 aa5.39□□□□□ -1.55
RAT1YOR048C NRD1P53617 575 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55 RIP-Chip
RAT1YOR048C ORC3P54790 616 aa5.39□□□□□ -1.55
RAT1YOR048C MMT1Q03218 510 aa5.39□□□□□ -1.55
RAT1YOR048C SPO71Q03868 1245 aa5.39□□□□□ -1.55
RAT1YOR048C DYN3Q04949 312 aa5.39□□□□□ -1.55
RAT1YOR048C RIF2Q06208 395 aa5.39□□□□□ -1.55
RAT1YOR048C BUD20Q08004 166 aaPredicted RBP5.39□□□□□ -1.55
RAT1YOR048C YLL056CQ12177 298 aa5.39□□□□□ -1.55
RAT1YOR048C IZH4Q99393 312 aa5.39□□□□□ -1.55
RAT1YOR048C NAT1P12945 854 aaKnown RBP5.39□□□□□ -1.55
RAT1YOR048C ATR1P13090 542 aa5.39□□□□□ -1.55
RAT1YOR048C ITR2P30606 609 aa5.39□□□□□ -1.55
RAT1YOR048C MMS4P38257 691 aa5.39□□□□□ -1.55
RAT1YOR048C AMN1P38285 549 aaPredicted RBP5.39□□□□□ -1.55
RAT1YOR048C KSP1P38691 1029 aaKnown RBP5.39□□□□□ -1.55
RAT1YOR048C MSC7P38694 644 aa5.39□□□□□ -1.55
RAT1YOR048C PMC1P38929 1173 aaPredicted RBP5.39□□□□□ -1.55
RAT1YOR048C GUS1P46655 708 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
RAT1YOR048C ORM2Q06144 216 aa5.39□□□□□ -1.55
RAT1YOR048C MCM21Q06675 368 aa5.39□□□□□ -1.55
RAT1YOR048C ESA1Q08649 445 aa5.39□□□□□ -1.55
RAT1YOR048C TRE2Q08693 809 aa5.39□□□□□ -1.55
RAT1YOR048C YPL191CQ08930 360 aa5.39□□□□□ -1.55
RAT1YOR048C RHO2P06781 192 aa5.38□□□□□ -1.55
RAT1YOR048C GPA2P10823 449 aa5.38□□□□□ -1.55
RAT1YOR048C MAS2P11914 482 aa5.38□□□□□ -1.55
RAT1YOR048C POL30P15873 258 aaKnown RBP5.38□□□□□ -1.55
RAT1YOR048C CCA1P21269 546 aa5.38□□□□□ -1.55
RAT1YOR048C MSB1P21339 1137 aaKnown RBP5.38□□□□□ -1.55
RAT1YOR048C CTR86P25355 563 aa5.38□□□□□ -1.55
RAT1YOR048C UBC8P28263 218 aa5.38□□□□□ -1.55
RAT1YOR048C PHA2P32452 334 aa5.38□□□□□ -1.55
RAT1YOR048C MAE1P36013 669 aaKnown RBP5.38□□□□□ -1.55
RAT1YOR048C ARF3P40994 183 aaRIP-Chip data5.38□□□□□ -1.55 RIP-Chip
RAT1YOR048C YJR154WP47181 346 aa5.38□□□□□ -1.55
RAT1YOR048C CUS2P53830 285 aaPredicted RBP5.38□□□□□ -1.55
RAT1YOR048C ALG11P53954 548 aaKnown RBP5.38□□□□□ -1.55
RAT1YOR048C PEX15Q08215 383 aa5.38□□□□□ -1.55
RAT1YOR048C PSY3Q12318 242 aa5.38□□□□□ -1.55
RAT1YOR048C PCD1Q12524 340 aa5.38□□□□□ -1.55
RAT1YOR048C VPS5Q92331 675 aa5.38□□□□□ -1.55
RAT1YOR048C CBS2P14905 389 aa5.38□□□□□ -1.55
RAT1YOR048C AMS1P22855 1083 aa5.38□□□□□ -1.55
RAT1YOR048C YCK2P23292 546 aaKnown RBP5.38□□□□□ -1.55
RAT1YOR048C VPS29P38759 282 aa5.38□□□□□ -1.55
RAT1YOR048C VAB2P40003 282 aa5.38□□□□□ -1.55
RAT1YOR048C AVT6P40074 448 aa5.38□□□□□ -1.55
RAT1YOR048C CAB2P40506 365 aa5.38□□□□□ -1.55
RAT1YOR048C STB1P42845 420 aa5.38□□□□□ -1.55
RAT1YOR048C KTR6P54070 446 aa5.38□□□□□ -1.55
RAT1YOR048C ECM38Q05902 660 aaPredicted RBP5.38□□□□□ -1.55
RAT1YOR048C GUD1Q07729 489 aa5.38□□□□□ -1.55
RAT1YOR048C TPO1Q07824 586 aa5.38□□□□□ -1.55
RAT1YOR048C DDC1Q08949 612 aa5.38□□□□□ -1.55
RAT1YOR048C KCS1Q12494 1050 aa5.38□□□□□ -1.55
RAT1YOR048C CAR1P00812 333 aaKnown RBP5.37□□□□□ -1.55
RAT1YOR048C PRT1P06103 763 aaKnown RBP5.37□□□□□ -1.55
RAT1YOR048C APE1P14904 514 aa5.37□□□□□ -1.55
RAT1YOR048C SEC63P14906 663 aa5.37□□□□□ -1.55
RAT1YOR048C GLC3P32775 704 aa5.37□□□□□ -1.55
RAT1YOR048C SMY2P32909 740 aaKnown RBP5.37□□□□□ -1.55
RAT1YOR048C URA8P38627 578 aaPredicted RBP5.37□□□□□ -1.55
RAT1YOR048C YAT2P40017 923 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms