RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	SND1	Q04007	877 aa		3.4	□□□□□ -1.87
SWS2	YNL081C	GET3	Q12154	354 aa	Known RBP	3.4	□□□□□ -1.87
SWS2	YNL081C	SST2	P11972	698 aa	Known RBP	3.39	□□□□□ -1.87
SWS2	YNL081C	SKP2	P42843	763 aa		3.39	□□□□□ -1.87
SWS2	YNL081C	MDV1	P47025	714 aa		3.39	□□□□□ -1.87
SWS2	YNL081C	TAN1	P53072	289 aa	Predicted RBP	3.39	□□□□□ -1.87
SWS2	YNL081C	LSC1	P53598	329 aa	Known RBP	3.39	□□□□□ -1.87
SWS2	YNL081C	TEP1	P53916	434 aa		3.39	□□□□□ -1.87
SWS2	YNL081C	BOP3	P53958	396 aa		3.39	□□□□□ -1.87
SWS2	YNL081C	CEG1	Q01159	459 aa	Predicted RBP	3.39	□□□□□ -1.87
SWS2	YNL081C	ARA2	Q04212	335 aa		3.39	□□□□□ -1.87
SWS2	YNL081C	LEA1	Q08963	238 aa	Predicted RBP	3.39	□□□□□ -1.87
SWS2	YNL081C	RVB2	Q12464	471 aa	Known RBP	3.39	□□□□□ -1.87
SWS2	YNL081C	AIM17	P23180	465 aa	Known RBP	3.38	□□□□□ -1.87
SWS2	YNL081C	LAC1	P28496	418 aa		3.38	□□□□□ -1.87
SWS2	YNL081C	ARN1	P38731	627 aa		3.38	□□□□□ -1.87
SWS2	YNL081C	ERC1	P38767	581 aa		3.38	□□□□□ -1.87
SWS2	YNL081C	FAF1	P40546	346 aa	Predicted RBP	3.38	□□□□□ -1.87
SWS2	YNL081C	YIR016W	P40572	265 aa		3.38	□□□□□ -1.87
SWS2	YNL081C	YJL107C	P42947	387 aa		3.38	□□□□□ -1.87
SWS2	YNL081C	MAD3	P47074	515 aa		3.38	□□□□□ -1.87
SWS2	YNL081C	YRB30	P53107	440 aa	Predicted RBP	3.38	□□□□□ -1.87
SWS2	YNL081C	ECM22	Q05958	814 aa	Predicted RBP	3.38	□□□□□ -1.87
SWS2	YNL081C	UBX3	Q12229	455 aa		3.38	□□□□□ -1.87
SWS2	YNL081C	YOL114C	Q12322	202 aa		3.38	□□□□□ -1.87
SWS2	YNL081C	MIS1	P09440	975 aa	Known RBP	3.37	□□□□□ -1.87
SWS2	YNL081C	SEC18	P18759	758 aa	Known RBP	3.37	□□□□□ -1.87
SWS2	YNL081C	SIR1	P21691	654 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	GSH1	P32477	678 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	GCD7	P32502	381 aa	Predicted RBP	3.37	□□□□□ -1.87
SWS2	YNL081C	STT3	P39007	718 aa	Known RBP	3.37	□□□□□ -1.87
SWS2	YNL081C	NPA3	P47122	385 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	PEX8	P53248	589 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	YNL144C	P53907	740 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	RPL15B	P54780	204 aa	Predicted RBP	3.37	□□□□□ -1.87
SWS2	YNL081C	TGL2	P54857	326 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	NUP53	Q03790	475 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	THI3	Q07471	609 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	ICL2	Q12031	575 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	RRI1	Q12468	440 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	MPD2	Q99316	277 aa		3.37	□□□□□ -1.87
SWS2	YNL081C	COX1	P00401	534 aa		3.36	□□□□□ -1.87
SWS2	YNL081C	CNA1	P23287	553 aa		3.36	□□□□□ -1.87
SWS2	YNL081C	FRD1	P32614	470 aa	Known RBP	3.36	□□□□□ -1.87
SWS2	YNL081C	TOM20	P35180	183 aa		3.36	□□□□□ -1.87
SWS2	YNL081C	HES1	P35843	434 aa		3.36	□□□□□ -1.87
SWS2	YNL081C	ERV46	P39727	415 aa		3.36	□□□□□ -1.87
SWS2	YNL081C	VPS27	P40343	622 aa	Known RBP	3.36	□□□□□ -1.87
SWS2	YNL081C	MEP2	P41948	499 aa		3.36	□□□□□ -1.87
SWS2	YNL081C	IWR1	Q07532	353 aa	Predicted RBP	3.36	□□□□□ -1.87
SWS2	YNL081C	SRL1	Q08673	210 aa		3.36	□□□□□ -1.87
SWS2	YNL081C	POL3	P15436	1097 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	MCM3	P24279	971 aa	Known RBP	3.35	□□□□□ -1.87
SWS2	YNL081C	MSH1	P25846	959 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	ATO2	P32907	282 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	GRX7	P38068	203 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	UBP8	P50102	471 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	MTG1	Q03151	367 aa	Predicted RBP	3.35	□□□□□ -1.87
SWS2	YNL081C	YDR109C	Q04585	715 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	GTB1	Q04924	702 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	PDR8	Q06149	701 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	MLC2	Q06580	163 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	ATG23	Q06671	453 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	BUD7	Q08754	746 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	PFA4	Q12006	378 aa		3.35	□□□□□ -1.87
SWS2	YNL081C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
SWS2	YNL081C	GAL4	P04386	881 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	PIF1	P07271	859 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	YCP4	P25349	247 aa	Known RBP	3.34	□□□□□ -1.87
SWS2	YNL081C	OCT1	P35999	772 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	APM3	P38153	483 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	TPA1	P40032	644 aa	Known RBP	3.34	□□□□□ -1.87
SWS2	YNL081C	DJP1	P40564	432 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	YPT11	P48559	417 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	TDA9	Q04545	1251 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	SNA4	Q07549	140 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	BAG7	Q12128	409 aa		3.34	□□□□□ -1.87
SWS2	YNL081C	PET122	P10355	254 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	BIK1	P11709	440 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	RIT1	P23796	513 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	URK1	P27515	501 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	PTP2	P29461	750 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	HIS6	P40545	261 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	VPS25	P47142	202 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	LYS20	P48570	428 aa	Known RBP	3.33	□□□□□ -1.88
SWS2	YNL081C	YGR079W	P53249	370 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	MET14	Q02196	202 aa		3.33	□□□□□ -1.88
SWS2	YNL081C	NEW1	Q08972	1196 aa	Known RBP	3.33	□□□□□ -1.88
SWS2	YNL081C	GAL1	P04385	528 aa		3.32	□□□□□ -1.88
SWS2	YNL081C	ATP4	P05626	244 aa		3.32	□□□□□ -1.88
SWS2	YNL081C	ADE3	P07245	946 aa	Known RBP	3.32	□□□□□ -1.88
SWS2	YNL081C	SUI3	P09064	285 aa	Known RBP	3.32	□□□□□ -1.88
SWS2	YNL081C	MRP2	P10663	115 aa	Predicted RBP	3.32	□□□□□ -1.88
SWS2	YNL081C	FSH1	P38777	243 aa	Known RBP	3.32	□□□□□ -1.88
SWS2	YNL081C	PHM8	P40025	321 aa		3.32	□□□□□ -1.88
SWS2	YNL081C	UBP7	P40453	1071 aa		3.32	□□□□□ -1.88
SWS2	YNL081C	ASG1	P40467	964 aa		3.32	□□□□□ -1.88
SWS2	YNL081C	QRI7	P43122	407 aa		3.32	□□□□□ -1.88
SWS2	YNL081C	MSY1	P48527	492 aa		3.32	□□□□□ -1.88
SWS2	YNL081C	IMA1	P53051	589 aa		3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms