RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A SRP101P32916 621 aa6.61□□□□□ -1.35
KSH1YNL024C-A YBR062CP38239 180 aa6.61□□□□□ -1.35
KSH1YNL024C-A PPE1P38796 400 aa6.61□□□□□ -1.35
KSH1YNL024C-A NMD3P38861 518 aaKnown RBP6.61□□□□□ -1.35
KSH1YNL024C-A OPT1P40897 799 aa6.61□□□□□ -1.35
KSH1YNL024C-A CDC1P40986 491 aa6.61□□□□□ -1.35
KSH1YNL024C-A RTT101P47050 842 aa6.61□□□□□ -1.35
KSH1YNL024C-A GTR1Q00582 310 aa6.61□□□□□ -1.35
KSH1YNL024C-A CEG1Q01159 459 aaPredicted RBP6.61□□□□□ -1.35
KSH1YNL024C-A YET3Q07451 203 aa6.61□□□□□ -1.35
KSH1YNL024C-A MRN1Q08925 612 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35 RIP-Chip
KSH1YNL024C-A SLP1Q12232 587 aa6.61□□□□□ -1.35
KSH1YNL024C-A SVS1Q12254 260 aa6.61□□□□□ -1.35
KSH1YNL024C-A YPT6Q99260 215 aa6.61□□□□□ -1.35
KSH1YNL024C-A HIS1P00498 297 aaKnown RBP6.6□□□□□ -1.35
KSH1YNL024C-A HEM3P28789 327 aa6.6□□□□□ -1.35
KSH1YNL024C-A SYN8P31377 255 aa6.6□□□□□ -1.35
KSH1YNL024C-A NDI1P32340 513 aa6.6□□□□□ -1.35
KSH1YNL024C-A HXT3P32466 567 aaKnown RBP6.6□□□□□ -1.35
KSH1YNL024C-A PDB1P32473 366 aaKnown RBP6.6□□□□□ -1.35
KSH1YNL024C-A TOA1P32773 286 aa6.6□□□□□ -1.35
KSH1YNL024C-A RDH54P38086 958 aa6.6□□□□□ -1.35
KSH1YNL024C-A KAP104P38217 918 aaKnown RBP6.6□□□□□ -1.35
KSH1YNL024C-A YHL041WP38730 149 aa6.6□□□□□ -1.35
KSH1YNL024C-A CRP1P38845 465 aaKnown RBP6.6□□□□□ -1.35
KSH1YNL024C-A VAC8P39968 578 aa6.6□□□□□ -1.35
KSH1YNL024C-A EMW1P42842 904 aaKnown RBP6.6□□□□□ -1.35
KSH1YNL024C-A PAN2P53010 1115 aaPredicted RBP6.6□□□□□ -1.35
KSH1YNL024C-A NUT1P53114 1132 aa6.6□□□□□ -1.35
KSH1YNL024C-A YGR127WP53275 312 aa6.6□□□□□ -1.35
KSH1YNL024C-A BET4Q00618 327 aa6.6□□□□□ -1.35
KSH1YNL024C-A MAP1Q01662 387 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
KSH1YNL024C-A MTD1Q02046 320 aaKnown RBP6.6□□□□□ -1.35
KSH1YNL024C-A INP2Q03824 705 aa6.6□□□□□ -1.35
KSH1YNL024C-A TAF11Q04226 346 aa6.6□□□□□ -1.35
KSH1YNL024C-A RSC2Q06488 889 aa6.6□□□□□ -1.35
KSH1YNL024C-A YPR097WQ06839 1073 aa6.6□□□□□ -1.35
KSH1YNL024C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
KSH1YNL024C-A LEA1Q08963 238 aaPredicted RBP6.6□□□□□ -1.35
KSH1YNL024C-A PRC1P00729 532 aa6.59□□□□□ -1.35
KSH1YNL024C-A TEF1P02994 458 aaKnown RBP6.59□□□□□ -1.35
KSH1YNL024C-A CIT2P08679 460 aa6.59□□□□□ -1.35
KSH1YNL024C-A INO1P11986 533 aa6.59□□□□□ -1.35
KSH1YNL024C-A GCY1P14065 312 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
KSH1YNL024C-A ARG1P22768 420 aa6.59□□□□□ -1.35
KSH1YNL024C-A GID7P25569 745 aa6.59□□□□□ -1.35
KSH1YNL024C-A ECM13P38195 257 aa6.59□□□□□ -1.35
KSH1YNL024C-A FZO1P38297 855 aa6.59□□□□□ -1.35
KSH1YNL024C-A YEL028WP39989 153 aa6.59□□□□□ -1.35
KSH1YNL024C-A EDC3P39998 551 aaKnown RBP6.59□□□□□ -1.35
KSH1YNL024C-A RLP7P40693 322 aaKnown RBP6.59□□□□□ -1.35
KSH1YNL024C-A RPS10BP46784 105 aaKnown RBP6.59□□□□□ -1.35
KSH1YNL024C-A BIO4P53630 237 aa6.59□□□□□ -1.35
KSH1YNL024C-A IST1P53843 298 aaPredicted RBP6.59□□□□□ -1.35
KSH1YNL024C-A PNG1Q02890 363 aa6.59□□□□□ -1.35
KSH1YNL024C-A SPG3Q04398 127 aaPredicted RBP6.59□□□□□ -1.35
KSH1YNL024C-A YDR338CQ05497 695 aa6.59□□□□□ -1.35
KSH1YNL024C-A ECM22Q05958 814 aaPredicted RBP6.59□□□□□ -1.35
KSH1YNL024C-A MRI1Q06489 411 aaKnown RBP6.59□□□□□ -1.35
KSH1YNL024C-A ALR1Q08269 859 aa6.59□□□□□ -1.35
KSH1YNL024C-A RPS10AQ08745 105 aaPredicted RBP6.59□□□□□ -1.35
KSH1YNL024C-A HRT3Q12347 344 aa6.59□□□□□ -1.35
KSH1YNL024C-A RRP36Q12481 300 aaPredicted RBP6.59□□□□□ -1.35
KSH1YNL024C-A NOT5Q12514 560 aaPredicted RBP6.59□□□□□ -1.35
KSH1YNL024C-A BEM2P39960 2167 aaKnown RBP6.59□□□□□ -1.35
KSH1YNL024C-A ENO2P00925 437 aaKnown RBP6.58□□□□□ -1.36
KSH1YNL024C-A PAB1P04147 577 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36 RIP-Chip
KSH1YNL024C-A MET16P18408 261 aaPredicted RBP6.58□□□□□ -1.36
KSH1YNL024C-A EXO70P19658 623 aa6.58□□□□□ -1.36
KSH1YNL024C-A GAL11P19659 1081 aa6.58□□□□□ -1.36
KSH1YNL024C-A PRP4P20053 465 aaKnown RBP6.58□□□□□ -1.36
KSH1YNL024C-A BAS1P22035 811 aa6.58□□□□□ -1.36
KSH1YNL024C-A YJU3P28321 313 aa6.58□□□□□ -1.36
KSH1YNL024C-A MVD1P32377 396 aaKnown RBP6.58□□□□□ -1.36
KSH1YNL024C-A PEX2P32800 271 aa6.58□□□□□ -1.36
KSH1YNL024C-A PEP8P40335 379 aa6.58□□□□□ -1.36
KSH1YNL024C-A PFK26P40433 827 aaKnown RBP6.58□□□□□ -1.36
KSH1YNL024C-A FAF1P40546 346 aaPredicted RBP6.58□□□□□ -1.36
KSH1YNL024C-A ROK1P45818 564 aaPredicted RBP6.58□□□□□ -1.36
KSH1YNL024C-A DLD2P46681 530 aaKnown RBP6.58□□□□□ -1.36
KSH1YNL024C-A TMA22P47089 198 aaPredicted RBP6.58□□□□□ -1.36
KSH1YNL024C-A NOP15P53927 220 aaPredicted RBP6.58□□□□□ -1.36
KSH1YNL024C-A SPO71Q03868 1245 aa6.58□□□□□ -1.36
KSH1YNL024C-A ARA2Q04212 335 aa6.58□□□□□ -1.36
KSH1YNL024C-A GTB1Q04924 702 aa6.58□□□□□ -1.36
KSH1YNL024C-A CDC123Q05791 360 aa6.58□□□□□ -1.36
KSH1YNL024C-A ADY3Q07732 790 aa6.58□□□□□ -1.36
KSH1YNL024C-A RGS2Q99188 309 aa6.58□□□□□ -1.36
KSH1YNL024C-A ATP12P22135 325 aa6.57□□□□□ -1.36
KSH1YNL024C-A YCL068CP25593 260 aa6.57□□□□□ -1.36
KSH1YNL024C-A AAD3P25612 363 aa6.57□□□□□ -1.36
KSH1YNL024C-A ADK2P26364 225 aa6.57□□□□□ -1.36
KSH1YNL024C-A RPC19P28000 142 aaKnown RBP6.57□□□□□ -1.36
KSH1YNL024C-A UTR2P32623 467 aa6.57□□□□□ -1.36
KSH1YNL024C-A YKR051WP36142 418 aa6.57□□□□□ -1.36
KSH1YNL024C-A RIM2P38127 377 aa6.57□□□□□ -1.36
KSH1YNL024C-A YBR225WP38321 900 aa6.57□□□□□ -1.36
KSH1YNL024C-A STB5P38699 743 aa6.57□□□□□ -1.36
KSH1YNL024C-A BTT1P40314 149 aaPredicted RBP6.57□□□□□ -1.36
KSH1YNL024C-A ELO3P40319 345 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms