RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C VPS60Q03390 229 aa6.43□□□□□ -1.38
SCS7YMR272C UTP13Q05946 817 aaKnown RBP6.43□□□□□ -1.38
SCS7YMR272C BNA5Q05979 453 aa6.43□□□□□ -1.38
SCS7YMR272C YFT2Q06676 274 aa6.43□□□□□ -1.38
SCS7YMR272C SWC7Q06707 132 aa6.43□□□□□ -1.38
SCS7YMR272C NRT1Q08485 598 aa6.43□□□□□ -1.38
SCS7YMR272C ZRT2Q12436 422 aa6.43□□□□□ -1.38
SCS7YMR272C SBP1P10080 294 aaKnown RBP6.42□□□□□ -1.38
SCS7YMR272C HSF1P10961 833 aa6.42□□□□□ -1.38
SCS7YMR272C BRF1P29056 596 aa6.42□□□□□ -1.38
SCS7YMR272C HXT1P32465 570 aa6.42□□□□□ -1.38
SCS7YMR272C CNS1P33313 385 aa6.42□□□□□ -1.38
SCS7YMR272C KES1P35844 434 aaKnown RBP6.42□□□□□ -1.38
SCS7YMR272C MCX1P38323 520 aaPredicted RBP6.42□□□□□ -1.38
SCS7YMR272C CKB2P38930 258 aa6.42□□□□□ -1.38
SCS7YMR272C RPH1P39956 796 aa6.42□□□□□ -1.38
SCS7YMR272C RRT5P43607 289 aa6.42□□□□□ -1.38
SCS7YMR272C AMA1P50082 593 aa6.42□□□□□ -1.38
SCS7YMR272C YGL108CP53139 140 aa6.42□□□□□ -1.38
SCS7YMR272C UFO1Q04511 668 aa6.42□□□□□ -1.38
SCS7YMR272C SOV1Q04748 898 aa6.42□□□□□ -1.38
SCS7YMR272C CMS1Q07897 291 aaKnown RBP6.42□□□□□ -1.38
SCS7YMR272C PET123P17558 318 aa6.41□□□□□ -1.38
SCS7YMR272C RRP43P25359 394 aaPredicted RBP6.41□□□□□ -1.38
SCS7YMR272C RML2P32611 393 aa6.41□□□□□ -1.38
SCS7YMR272C RCK2P38623 610 aa6.41□□□□□ -1.38
SCS7YMR272C BUD13P46947 266 aaPredicted RBP6.41□□□□□ -1.38
SCS7YMR272C RPC17P47076 161 aa6.41□□□□□ -1.38
SCS7YMR272C NNF1P47149 201 aa6.41□□□□□ -1.38
SCS7YMR272C TRF5P48561 642 aaKnown RBP6.41□□□□□ -1.38
SCS7YMR272C MNN10P50108 393 aaKnown RBP6.41□□□□□ -1.38
SCS7YMR272C RTA1P53047 317 aa6.41□□□□□ -1.38
SCS7YMR272C BTN2P53286 410 aa6.41□□□□□ -1.38
SCS7YMR272C IPI3P53877 555 aa6.41□□□□□ -1.38
SCS7YMR272C SIW14P53965 281 aa6.41□□□□□ -1.38
SCS7YMR272C YMR187CQ03236 431 aa6.41□□□□□ -1.38
SCS7YMR272C TRM82Q03774 444 aa6.41□□□□□ -1.38
SCS7YMR272C ARG7Q04728 441 aa6.41□□□□□ -1.38
SCS7YMR272C YLR456WQ06199 204 aa6.41□□□□□ -1.38
SCS7YMR272C YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
SCS7YMR272C THI73Q07904 523 aa6.41□□□□□ -1.38
SCS7YMR272C FAP7Q12055 197 aaPredicted RBP6.41□□□□□ -1.38
SCS7YMR272C CPA1P07258 411 aaKnown RBP6.4□□□□□ -1.38
SCS7YMR272C INO1P11986 533 aa6.4□□□□□ -1.38
SCS7YMR272C APA1P16550 321 aaKnown RBP6.4□□□□□ -1.38
SCS7YMR272C HSP60P19882 572 aaKnown RBP6.4□□□□□ -1.38
SCS7YMR272C UBA1P22515 1024 aaKnown RBP6.4□□□□□ -1.38
SCS7YMR272C YSP3P25036 478 aa6.4□□□□□ -1.38
SCS7YMR272C DCC1P25559 380 aa6.4□□□□□ -1.38
SCS7YMR272C SLX5P32828 619 aaKnown RBP6.4□□□□□ -1.38
SCS7YMR272C PMT1P33775 817 aa6.4□□□□□ -1.38
SCS7YMR272C STB6P36085 766 aa6.4□□□□□ -1.38
SCS7YMR272C ELO1P39540 310 aa6.4□□□□□ -1.38
SCS7YMR272C FLC2P39719 783 aa6.4□□□□□ -1.38
SCS7YMR272C ERV46P39727 415 aa6.4□□□□□ -1.38
SCS7YMR272C LCP5P40079 357 aaPredicted RBP6.4□□□□□ -1.38
SCS7YMR272C NPY1P53164 384 aa6.4□□□□□ -1.38
SCS7YMR272C SWC4P53201 476 aa6.4□□□□□ -1.38
SCS7YMR272C NOP15P53927 220 aaPredicted RBP6.4□□□□□ -1.38
SCS7YMR272C SWS2P53937 143 aa6.4□□□□□ -1.38
SCS7YMR272C CIA1Q05583 330 aa6.4□□□□□ -1.38
SCS7YMR272C HBT1Q07653 1046 aaKnown RBP6.4□□□□□ -1.38
SCS7YMR272C APL4Q12028 832 aa6.4□□□□□ -1.38
SCS7YMR272C YDR018CQ12185 396 aa6.4□□□□□ -1.38
SCS7YMR272C FRT1Q99332 602 aa6.4□□□□□ -1.38
SCS7YMR272C Q0182Q9ZZW1 134 aa6.4□□□□□ -1.38
SCS7YMR272C MDM35O60200 86 aa6.39□□□□□ -1.39
SCS7YMR272C LEU1P07264 779 aaKnown RBP6.39□□□□□ -1.39
SCS7YMR272C AAT2P23542 418 aaKnown RBP6.39□□□□□ -1.39
SCS7YMR272C UBC6P33296 250 aaPredicted RBP6.39□□□□□ -1.39
SCS7YMR272C YBR259WP38338 688 aa6.39□□□□□ -1.39
SCS7YMR272C PFS1P38872 237 aa6.39□□□□□ -1.39
SCS7YMR272C SET5P38890 526 aaKnown RBP6.39□□□□□ -1.39
SCS7YMR272C ELO3P40319 345 aa6.39□□□□□ -1.39
SCS7YMR272C PAN6P40459 309 aa6.39□□□□□ -1.39
SCS7YMR272C NUP85P46673 744 aa6.39□□□□□ -1.39
SCS7YMR272C BIR1P47134 954 aa6.39□□□□□ -1.39
SCS7YMR272C STR2P47164 639 aa6.39□□□□□ -1.39
SCS7YMR272C ARH1P48360 493 aa6.39□□□□□ -1.39
SCS7YMR272C BRO1P48582 844 aa6.39□□□□□ -1.39
SCS7YMR272C TEP1P53916 434 aa6.39□□□□□ -1.39
SCS7YMR272C HEL2Q05580 639 aaKnown RBP6.39□□□□□ -1.39
SCS7YMR272C VTA1Q06263 330 aa6.39□□□□□ -1.39
SCS7YMR272C ALR1Q08269 859 aa6.39□□□□□ -1.39
SCS7YMR272C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
SCS7YMR272C PIN2Q12057 282 aa6.39□□□□□ -1.39
SCS7YMR272C GNT1Q12096 491 aa6.39□□□□□ -1.39
SCS7YMR272C AI5_ALPHAQ9ZZX1 630 aa6.39□□□□□ -1.39
SCS7YMR272C INH1P01097 85 aa6.38□□□□□ -1.39
SCS7YMR272C RED1P14291 827 aa6.38□□□□□ -1.39
SCS7YMR272C SEC63P14906 663 aa6.38□□□□□ -1.39
SCS7YMR272C CLB1P24868 471 aa6.38□□□□□ -1.39
SCS7YMR272C PHO84P25297 587 aaKnown RBP6.38□□□□□ -1.39
SCS7YMR272C RBK1P25332 333 aa6.38□□□□□ -1.39
SCS7YMR272C DEP1P31385 405 aa6.38□□□□□ -1.39
SCS7YMR272C SPS19P32573 292 aaKnown RBP6.38□□□□□ -1.39
SCS7YMR272C UBP14P38237 781 aaKnown RBP6.38□□□□□ -1.39
SCS7YMR272C TAE1P38340 232 aa6.38□□□□□ -1.39
SCS7YMR272C PPE1P38796 400 aa6.38□□□□□ -1.39
SCS7YMR272C SAW1P39735 261 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms