RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C SLY1P22213 666 aa3.55□□□□□ -1.84
SHH3YMR118C SAN1P22470 610 aa3.55□□□□□ -1.84
SHH3YMR118C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SHH3YMR118C RPS5P26783 225 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C ZIP1P31111 875 aa3.55□□□□□ -1.84
SHH3YMR118C GYP6P32806 458 aa3.55□□□□□ -1.84
SHH3YMR118C UGA4P32837 571 aa3.55□□□□□ -1.84
SHH3YMR118C RPT5P33297 434 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C PIN4P34217 668 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SHH3YMR118C UTP11P34247 250 aaPredicted RBP3.55□□□□□ -1.84
SHH3YMR118C RRN3P36070 627 aa3.55□□□□□ -1.84
SHH3YMR118C PDX3P38075 228 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C YDR089WP38966 869 aa3.55□□□□□ -1.84
SHH3YMR118C YJL206CP39529 758 aa3.55□□□□□ -1.84
SHH3YMR118C NPT1P39683 429 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C NPR2P39923 615 aa3.55□□□□□ -1.84
SHH3YMR118C SSP120P39931 234 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C TMN3P40071 706 aa3.55□□□□□ -1.84
SHH3YMR118C TMA108P40462 946 aa3.55□□□□□ -1.84
SHH3YMR118C FIS1P40515 155 aa3.55□□□□□ -1.84
SHH3YMR118C IRR1P40541 1150 aa3.55□□□□□ -1.84
SHH3YMR118C CHS6P40955 746 aa3.55□□□□□ -1.84
SHH3YMR118C ARC1P46672 376 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C STB2P46679 850 aa3.55□□□□□ -1.84
SHH3YMR118C BNA3P47039 444 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C MAD3P47074 515 aa3.55□□□□□ -1.84
SHH3YMR118C RTA1P53047 317 aa3.55□□□□□ -1.84
SHH3YMR118C YTP1P53584 459 aa3.55□□□□□ -1.84
SHH3YMR118C YNL247WP53852 767 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C ASI2P53895 289 aa3.55□□□□□ -1.84
SHH3YMR118C SLT2Q00772 484 aa3.55□□□□□ -1.84
SHH3YMR118C RSM24Q03976 319 aa3.55□□□□□ -1.84
SHH3YMR118C RAD30Q04049 632 aa3.55□□□□□ -1.84
SHH3YMR118C SPC2Q04969 178 aa3.55□□□□□ -1.84
SHH3YMR118C KAP95Q06142 861 aaKnown RBP3.55□□□□□ -1.84
SHH3YMR118C ATG26Q06321 1198 aa3.55□□□□□ -1.84
SHH3YMR118C MCH5Q08777 521 aa3.55□□□□□ -1.84
SHH3YMR118C YOR389WQ08912 624 aa3.55□□□□□ -1.84
SHH3YMR118C YPR089WO13585 888 aa3.54□□□□□ -1.84
SHH3YMR118C ATP2P00830 511 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C BI2P03873 423 aa3.54□□□□□ -1.84
SHH3YMR118C BI4P03879 638 aa3.54□□□□□ -1.84
SHH3YMR118C PAB1P04147 577 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SHH3YMR118C IMA3P0CW40 589 aa3.54□□□□□ -1.84
SHH3YMR118C IMA4P0CW41 589 aa3.54□□□□□ -1.84
SHH3YMR118C PET122P10355 254 aa3.54□□□□□ -1.84
SHH3YMR118C GPA2P10823 449 aa3.54□□□□□ -1.84
SHH3YMR118C GCN3P14741 305 aa3.54□□□□□ -1.84
SHH3YMR118C RET1P22276 1149 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C GFD2P25370 566 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C YCR015CP25616 317 aa3.54□□□□□ -1.84
SHH3YMR118C BUD23P25627 275 aaPredicted RBP3.54□□□□□ -1.84
SHH3YMR118C SKG6P32900 734 aaPredicted RBP3.54□□□□□ -1.84
SHH3YMR118C ATG19P35193 415 aa3.54□□□□□ -1.84
SHH3YMR118C TPO5P36029 618 aa3.54□□□□□ -1.84
SHH3YMR118C STV1P37296 890 aa3.54□□□□□ -1.84
SHH3YMR118C RIM2P38127 377 aa3.54□□□□□ -1.84
SHH3YMR118C CTP1P38152 299 aa3.54□□□□□ -1.84
SHH3YMR118C PFF1P38244 976 aa3.54□□□□□ -1.84
SHH3YMR118C CBR1P38626 284 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C PCM1P38628 557 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C ERC1P38767 581 aa3.54□□□□□ -1.84
SHH3YMR118C GGA2P38817 585 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C PEX18P38855 283 aa3.54□□□□□ -1.84
SHH3YMR118C SAW1P39735 261 aa3.54□□□□□ -1.84
SHH3YMR118C NPP2P39997 493 aa3.54□□□□□ -1.84
SHH3YMR118C IES5P40060 125 aa3.54□□□□□ -1.84
SHH3YMR118C SCC4P40090 624 aa3.54□□□□□ -1.84
SHH3YMR118C KHA1P40309 873 aa3.54□□□□□ -1.84
SHH3YMR118C PEP8P40335 379 aa3.54□□□□□ -1.84
SHH3YMR118C NTA1P40354 457 aa3.54□□□□□ -1.84
SHH3YMR118C RIC1P40395 1056 aa3.54□□□□□ -1.84
SHH3YMR118C UBP7P40453 1071 aa3.54□□□□□ -1.84
SHH3YMR118C SYG1P40528 902 aa3.54□□□□□ -1.84
SHH3YMR118C SWP82P43554 623 aa3.54□□□□□ -1.84
SHH3YMR118C YGL176CP46945 554 aa3.54□□□□□ -1.84
SHH3YMR118C YJL045WP47052 634 aa3.54□□□□□ -1.84
SHH3YMR118C EMC2P47133 292 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C HSH155P49955 971 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C ORC5P50874 479 aa3.54□□□□□ -1.84
SHH3YMR118C TAM41P53230 385 aa3.54□□□□□ -1.84
SHH3YMR118C TEP1P53916 434 aa3.54□□□□□ -1.84
SHH3YMR118C CIK1Q01649 594 aa3.54□□□□□ -1.84
SHH3YMR118C ERO1Q03103 563 aa3.54□□□□□ -1.84
SHH3YMR118C HAS1Q03532 505 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C YDR239CQ03780 787 aa3.54□□□□□ -1.84
SHH3YMR118C SND1Q04007 877 aa3.54□□□□□ -1.84
SHH3YMR118C MGR3Q04472 501 aa3.54□□□□□ -1.84
SHH3YMR118C YMR074CQ04773 145 aa3.54□□□□□ -1.84
SHH3YMR118C FMP42Q04991 504 aa3.54□□□□□ -1.84
SHH3YMR118C YMR226CQ05016 267 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C PHM6Q05637 104 aa3.54□□□□□ -1.84
SHH3YMR118C THI7Q05998 598 aa3.54□□□□□ -1.84
SHH3YMR118C DUS4Q06063 367 aa3.54□□□□□ -1.84
SHH3YMR118C TSR2Q06672 205 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C MCM21Q06675 368 aa3.54□□□□□ -1.84
SHH3YMR118C ASA1Q06822 443 aa3.54□□□□□ -1.84
SHH3YMR118C IWR1Q07532 353 aaPredicted RBP3.54□□□□□ -1.84
SHH3YMR118C WHI4Q07655 649 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C IMA2Q08295 589 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms