RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C SIP1P32578 815 aa4.13□□□□□ -1.75
SUB1YMR039C FRD1P32614 470 aaKnown RBP4.13□□□□□ -1.75
SUB1YMR039C RPT3P33298 428 aaKnown RBP4.13□□□□□ -1.75
SUB1YMR039C UBP7P40453 1071 aa4.13□□□□□ -1.75
SUB1YMR039C MEP2P41948 499 aa4.13□□□□□ -1.75
SUB1YMR039C YJL107CP42947 387 aa4.13□□□□□ -1.75
SUB1YMR039C ORC5P50874 479 aa4.13□□□□□ -1.75
SUB1YMR039C NUP53Q03790 475 aa4.13□□□□□ -1.75
SUB1YMR039C CNA1P23287 553 aa4.12□□□□□ -1.75
SUB1YMR039C STT3P39007 718 aaKnown RBP4.12□□□□□ -1.75
SUB1YMR039C MDV1P47025 714 aa4.12□□□□□ -1.75
SUB1YMR039C LSC1P53598 329 aaKnown RBP4.12□□□□□ -1.75
SUB1YMR039C LEA1Q08963 238 aaPredicted RBP4.12□□□□□ -1.75
SUB1YMR039C PFA4Q12006 378 aa4.12□□□□□ -1.75
SUB1YMR039C ATX2Q12067 313 aa4.12□□□□□ -1.75
SUB1YMR039C ATO2P32907 282 aa4.11□□□□□ -1.75
SUB1YMR039C NIC96P34077 839 aa4.11□□□□□ -1.75
SUB1YMR039C TOM20P35180 183 aa4.11□□□□□ -1.75
SUB1YMR039C ARN1P38731 627 aa4.11□□□□□ -1.75
SUB1YMR039C MAD3P47074 515 aa4.11□□□□□ -1.75
SUB1YMR039C NPA3P47122 385 aa4.11□□□□□ -1.75
SUB1YMR039C LYS20P48570 428 aaKnown RBP4.11□□□□□ -1.75
SUB1YMR039C YRB30P53107 440 aaPredicted RBP4.11□□□□□ -1.75
SUB1YMR039C YPL108WQ02872 168 aaPredicted RBP4.11□□□□□ -1.75
SUB1YMR039C SEC18P18759 758 aaKnown RBP4.1□□□□□ -1.75
SUB1YMR039C SIR1P21691 654 aa4.1□□□□□ -1.75
SUB1YMR039C LAC1P28496 418 aa4.1□□□□□ -1.75
SUB1YMR039C HES1P35843 434 aa4.1□□□□□ -1.75
SUB1YMR039C THI3Q07471 609 aa4.1□□□□□ -1.75
SUB1YMR039C SRL1Q08673 210 aa4.1□□□□□ -1.75
SUB1YMR039C ICL2Q12031 575 aa4.1□□□□□ -1.75
SUB1YMR039C RRI1Q12468 440 aa4.1□□□□□ -1.75
SUB1YMR039C MSS51P32335 436 aa4.09□□□□□ -1.75
SUB1YMR039C GRX7P38068 203 aa4.09□□□□□ -1.75
SUB1YMR039C TPA1P40032 644 aaKnown RBP4.09□□□□□ -1.75
SUB1YMR039C CAB2P40506 365 aa4.09□□□□□ -1.75
SUB1YMR039C YIR016WP40572 265 aa4.09□□□□□ -1.75
SUB1YMR039C PEX8P53248 589 aa4.09□□□□□ -1.75
SUB1YMR039C BOP3P53958 396 aa4.09□□□□□ -1.75
SUB1YMR039C SND1Q04007 877 aa4.09□□□□□ -1.75
SUB1YMR039C EIS1Q05050 843 aaKnown RBP4.09□□□□□ -1.75
SUB1YMR039C UBX3Q12229 455 aa4.09□□□□□ -1.75
SUB1YMR039C TMA7Q3E764 64 aaKnown RBP4.09□□□□□ -1.75
SUB1YMR039C COX1P00401 534 aa4.08□□□□□ -1.76
SUB1YMR039C SST2P11972 698 aaKnown RBP4.08□□□□□ -1.76
SUB1YMR039C GND1P38720 489 aaKnown RBP4.08□□□□□ -1.76
SUB1YMR039C FUN12P39730 1002 aaKnown RBP4.08□□□□□ -1.76
SUB1YMR039C YIL152WP40455 235 aa4.08□□□□□ -1.76
SUB1YMR039C CDC1P40986 491 aa4.08□□□□□ -1.76
SUB1YMR039C YGR079WP53249 370 aa4.08□□□□□ -1.76
SUB1YMR039C GTB1Q04924 702 aa4.08□□□□□ -1.76
SUB1YMR039C BUD7Q08754 746 aa4.08□□□□□ -1.76
SUB1YMR039C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76not detected
SUB1YMR039C YOL114CQ12322 202 aa4.08□□□□□ -1.76
SUB1YMR039C MPD2Q99316 277 aa4.08□□□□□ -1.76
SUB1YMR039C MCM3P24279 971 aaKnown RBP4.07□□□□□ -1.76
SUB1YMR039C OCT1P35999 772 aa4.07□□□□□ -1.76
SUB1YMR039C SCO2P38072 301 aa4.07□□□□□ -1.76
SUB1YMR039C PHM8P40025 321 aa4.07□□□□□ -1.76
SUB1YMR039C YPT11P48559 417 aa4.07□□□□□ -1.76
SUB1YMR039C YPR003CP53394 754 aa4.07□□□□□ -1.76
SUB1YMR039C TEP1P53916 434 aa4.07□□□□□ -1.76
SUB1YMR039C SNA4Q07549 140 aa4.07□□□□□ -1.76
SUB1YMR039C DSE3Q08729 430 aa4.07□□□□□ -1.76
SUB1YMR039C RVB2Q12464 471 aaKnown RBP4.07□□□□□ -1.76
SUB1YMR039C BIK1P11709 440 aa4.06□□□□□ -1.76
SUB1YMR039C UBX6P47049 396 aa4.06□□□□□ -1.76
SUB1YMR039C YNL144CP53907 740 aa4.06□□□□□ -1.76
SUB1YMR039C EAF7P53911 425 aaKnown RBP4.06□□□□□ -1.76
SUB1YMR039C ATG21Q02887 496 aa4.06□□□□□ -1.76
SUB1YMR039C ECM22Q05958 814 aaPredicted RBP4.06□□□□□ -1.76
SUB1YMR039C PDR8Q06149 701 aa4.06□□□□□ -1.76
SUB1YMR039C IWR1Q07532 353 aaPredicted RBP4.06□□□□□ -1.76
SUB1YMR039C TOP1P04786 769 aa4.05□□□□□ -1.76
SUB1YMR039C POL3P15436 1097 aa4.05□□□□□ -1.76
SUB1YMR039C RIT1P23796 513 aa4.05□□□□□ -1.76
SUB1YMR039C URK1P27515 501 aa4.05□□□□□ -1.76
SUB1YMR039C YKL133CP36066 463 aa4.05□□□□□ -1.76
SUB1YMR039C BUD16P39988 312 aa4.05□□□□□ -1.76
SUB1YMR039C IMA1P53051 589 aa4.05□□□□□ -1.76
SUB1YMR039C PIG1Q06216 648 aa4.05□□□□□ -1.76
SUB1YMR039C BRE1Q07457 700 aaKnown RBP4.05□□□□□ -1.76
SUB1YMR039C MLH2Q07980 695 aa4.05□□□□□ -1.76
SUB1YMR039C BAG7Q12128 409 aa4.05□□□□□ -1.76
SUB1YMR039C VPS41P38959 992 aa4.04□□□□□ -1.76
SUB1YMR039C QRI7P43122 407 aa4.04□□□□□ -1.76
SUB1YMR039C MSY1P48527 492 aa4.04□□□□□ -1.76
SUB1YMR039C TAN1P53072 289 aaPredicted RBP4.04□□□□□ -1.76
SUB1YMR039C CPR6P53691 371 aaKnown RBP4.04□□□□□ -1.76
SUB1YMR039C MET14Q02196 202 aa4.04□□□□□ -1.76
SUB1YMR039C YDR109CQ04585 715 aa4.04□□□□□ -1.76
SUB1YMR039C MLC2Q06580 163 aa4.04□□□□□ -1.76
SUB1YMR039C GSH2Q08220 491 aa4.04□□□□□ -1.76
SUB1YMR039C NEW1Q08972 1196 aaKnown RBP4.04□□□□□ -1.76
SUB1YMR039C SUL2Q12325 893 aa4.04□□□□□ -1.76
SUB1YMR039C ADE3P07245 946 aaKnown RBP4.03□□□□□ -1.76
SUB1YMR039C PIF1P07271 859 aa4.03□□□□□ -1.76
SUB1YMR039C PET122P10355 254 aa4.03□□□□□ -1.76
SUB1YMR039C APM3P38153 483 aa4.03□□□□□ -1.76
SUB1YMR039C DJP1P40564 432 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms