RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C TCD1P38756 429 aa5.17□□□□□ -1.58
BUD28YLR062C BAT1P38891 393 aaKnown RBP5.17□□□□□ -1.58
BUD28YLR062C YJR061WP40355 935 aa5.17□□□□□ -1.58
BUD28YLR062C ATM1P40416 690 aa5.17□□□□□ -1.58
BUD28YLR062C SER33P40510 469 aa5.17□□□□□ -1.58
BUD28YLR062C EFM4P40516 257 aa5.17□□□□□ -1.58
BUD28YLR062C YJL132WP47014 750 aa5.17□□□□□ -1.58
BUD28YLR062C BTN2P53286 410 aa5.17□□□□□ -1.58
BUD28YLR062C YTP1P53584 459 aa5.17□□□□□ -1.58
BUD28YLR062C NRD1P53617 575 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
BUD28YLR062C AQR1P53943 586 aa5.17□□□□□ -1.58
BUD28YLR062C VPS9P54787 451 aa5.17□□□□□ -1.58
BUD28YLR062C ORC3P54790 616 aa5.17□□□□□ -1.58
BUD28YLR062C CTR9P89105 1077 aa5.17□□□□□ -1.58
BUD28YLR062C YMR187CQ03236 431 aa5.17□□□□□ -1.58
BUD28YLR062C SWC7Q06707 132 aa5.17□□□□□ -1.58
BUD28YLR062C APL5Q08951 932 aaKnown RBP5.17□□□□□ -1.58
BUD28YLR062C MET32Q12041 191 aa5.17□□□□□ -1.58
BUD28YLR062C EFG1Q3E705 233 aaKnown RBP5.17□□□□□ -1.58
BUD28YLR062C AFI1Q99222 893 aa5.17□□□□□ -1.58
BUD28YLR062C YLR462WO13556 202 aa5.16□□□□□ -1.58
BUD28YLR062C RAD10P06838 210 aa5.16□□□□□ -1.58
BUD28YLR062C TUB3P09734 445 aaKnown RBP5.16□□□□□ -1.58
BUD28YLR062C SST2P11972 698 aaKnown RBP5.16□□□□□ -1.58
BUD28YLR062C PMS1P14242 873 aa5.16□□□□□ -1.58
BUD28YLR062C SFL1P20134 766 aa5.16□□□□□ -1.58
BUD28YLR062C AAT2P23542 418 aaKnown RBP5.16□□□□□ -1.58
BUD28YLR062C MIH1P23748 554 aa5.16□□□□□ -1.58
BUD28YLR062C LIP5P32875 414 aa5.16□□□□□ -1.58
BUD28YLR062C ALY1P36117 915 aa5.16□□□□□ -1.58
BUD28YLR062C PCA1P38360 1216 aa5.16□□□□□ -1.58
BUD28YLR062C RCK2P38623 610 aa5.16□□□□□ -1.58
BUD28YLR062C YHL049CP38722 271 aa5.16□□□□□ -1.58
BUD28YLR062C FLC2P39719 783 aa5.16□□□□□ -1.58
BUD28YLR062C LCP5P40079 357 aaPredicted RBP5.16□□□□□ -1.58
BUD28YLR062C ARG2P40360 574 aa5.16□□□□□ -1.58
BUD28YLR062C YFL064CP43540 174 aa5.16□□□□□ -1.58
BUD28YLR062C TRF5P48561 642 aaKnown RBP5.16□□□□□ -1.58
BUD28YLR062C EMC4P53073 190 aa5.16□□□□□ -1.58
BUD28YLR062C YGL140CP53120 1219 aa5.16□□□□□ -1.58
BUD28YLR062C YGR127WP53275 312 aa5.16□□□□□ -1.58
BUD28YLR062C IPI3P53877 555 aa5.16□□□□□ -1.58
BUD28YLR062C SAM4Q08985 325 aaKnown RBP5.16□□□□□ -1.58
BUD28YLR062C OCA6Q12454 224 aa5.16□□□□□ -1.58
BUD28YLR062C YBL111CQ3E7Y5 667 aa5.16□□□□□ -1.58
BUD28YLR062C SEY1Q99287 776 aa5.16□□□□□ -1.58
BUD28YLR062C RDS2P19541 446 aaKnown RBP5.15□□□□□ -1.59
BUD28YLR062C SLY1P22213 666 aa5.15□□□□□ -1.59
BUD28YLR062C MCX1P38323 520 aaPredicted RBP5.15□□□□□ -1.59
BUD28YLR062C PPE1P38796 400 aa5.15□□□□□ -1.59
BUD28YLR062C YHR078WP38799 552 aa5.15□□□□□ -1.59
BUD28YLR062C SAW1P39735 261 aa5.15□□□□□ -1.59
BUD28YLR062C SEC9P40357 651 aa5.15□□□□□ -1.59
BUD28YLR062C GLG2P47011 380 aa5.15□□□□□ -1.59
BUD28YLR062C ALY2P47029 1046 aa5.15□□□□□ -1.59
BUD28YLR062C COQ5P49017 307 aa5.15□□□□□ -1.59
BUD28YLR062C MNT2P53059 558 aa5.15□□□□□ -1.59
BUD28YLR062C RPC11Q04307 110 aaPredicted RBP5.15□□□□□ -1.59
BUD28YLR062C OPI10Q08202 246 aa5.15□□□□□ -1.59
BUD28YLR062C TRE2Q08693 809 aa5.15□□□□□ -1.59
BUD28YLR062C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
BUD28YLR062C YDR018CQ12185 396 aa5.15□□□□□ -1.59
BUD28YLR062C COX5AP00424 153 aa5.14□□□□□ -1.59
BUD28YLR062C LEU1P07264 779 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C MNE1P24720 663 aa5.14□□□□□ -1.59
BUD28YLR062C MRT4P33201 236 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C PMT1P33775 817 aa5.14□□□□□ -1.59
BUD28YLR062C STO1P34160 861 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C EBP2P36049 427 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C UTH1P36135 365 aa5.14□□□□□ -1.59
BUD28YLR062C DIA4P38705 446 aaPredicted RBP5.14□□□□□ -1.59
BUD28YLR062C OTU2P38747 307 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C PFS1P38872 237 aa5.14□□□□□ -1.59
BUD28YLR062C TIF34P40217 347 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C ELO3P40319 345 aa5.14□□□□□ -1.59
BUD28YLR062C RAD26P40352 1085 aa5.14□□□□□ -1.59
BUD28YLR062C PAN6P40459 309 aa5.14□□□□□ -1.59
BUD28YLR062C MND2P40577 368 aa5.14□□□□□ -1.59
BUD28YLR062C MKT1P40850 830 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C OSW7P43611 510 aa5.14□□□□□ -1.59
BUD28YLR062C ROK1P45818 564 aaPredicted RBP5.14□□□□□ -1.59
BUD28YLR062C YJR124CP47159 448 aa5.14□□□□□ -1.59
BUD28YLR062C COG7P53195 279 aa5.14□□□□□ -1.59
BUD28YLR062C ENT5Q03769 411 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C UTP13Q05946 817 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C CMS1Q07897 291 aaKnown RBP5.14□□□□□ -1.59
BUD28YLR062C PGC1Q08959 321 aa5.14□□□□□ -1.59
BUD28YLR062C Q0182Q9ZZW1 134 aa5.14□□□□□ -1.59
BUD28YLR062C TRA1P38811 3744 aa5.14□□□□□ -1.59
BUD28YLR062C SCH9P11792 824 aaKnown RBP5.13□□□□□ -1.59
BUD28YLR062C CKI1P20485 582 aa5.13□□□□□ -1.59
BUD28YLR062C RAD5P32849 1169 aaPredicted RBP5.13□□□□□ -1.59
BUD28YLR062C MRS6P32864 603 aaKnown RBP5.13□□□□□ -1.59
BUD28YLR062C TGL4P36165 910 aa5.13□□□□□ -1.59
BUD28YLR062C YHL041WP38730 149 aa5.13□□□□□ -1.59
BUD28YLR062C YPT35P38815 214 aaKnown RBP5.13□□□□□ -1.59
BUD28YLR062C END3P39013 349 aa5.13□□□□□ -1.59
BUD28YLR062C YAT2P40017 923 aa5.13□□□□□ -1.59
BUD28YLR062C IST3P40565 148 aaPredicted RBP5.13□□□□□ -1.59
BUD28YLR062C SET2P46995 733 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms