RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W YJR142WP47173 342 aa8.35□□□□□ -1.07
GGA2YHR108W BUD32P53323 261 aa8.35□□□□□ -1.07
GGA2YHR108W NHX1Q04121 633 aa8.35□□□□□ -1.07
GGA2YHR108W SWC7Q06707 132 aa8.35□□□□□ -1.07
GGA2YHR108W SVS1Q12254 260 aa8.35□□□□□ -1.07
GGA2YHR108W YMR030W-AQ3E760 96 aa8.35□□□□□ -1.07
GGA2YHR108W PRP6P19735 899 aaPredicted RBP8.34□□□□□ -1.07
GGA2YHR108W RAD14P28519 371 aa8.34□□□□□ -1.07
GGA2YHR108W RIM101P33400 625 aa8.34□□□□□ -1.07
GGA2YHR108W CTP1P38152 299 aa8.34□□□□□ -1.07
GGA2YHR108W SLX1P38324 304 aa8.34□□□□□ -1.07
GGA2YHR108W YHI9P38765 294 aa8.34□□□□□ -1.07
GGA2YHR108W BRL1P38770 471 aa8.34□□□□□ -1.07
GGA2YHR108W SHU2P38957 223 aa8.34□□□□□ -1.07
GGA2YHR108W JEM1P40358 645 aa8.34□□□□□ -1.07
GGA2YHR108W RTT101P47050 842 aa8.34□□□□□ -1.07
GGA2YHR108W UTP8P53276 713 aaKnown RBP8.34□□□□□ -1.07
GGA2YHR108W YNL115CP53925 644 aa8.34□□□□□ -1.07
GGA2YHR108W SIW14P53965 281 aa8.34□□□□□ -1.07
GGA2YHR108W RNY1Q02933 434 aaKnown RBP8.34□□□□□ -1.07
GGA2YHR108W INP2Q03824 705 aa8.34□□□□□ -1.07
GGA2YHR108W LEA1Q08963 238 aaPredicted RBP8.34□□□□□ -1.07
GGA2YHR108W SAM3Q08986 587 aa8.34□□□□□ -1.07
GGA2YHR108W CHS5Q12114 671 aaKnown RBP8.34□□□□□ -1.07
GGA2YHR108W STB3Q12427 513 aa8.34□□□□□ -1.07
GGA2YHR108W APM4Q99186 491 aa8.34□□□□□ -1.07
GGA2YHR108W AFI1Q99222 893 aa8.34□□□□□ -1.07
GGA2YHR108W ERG20P08524 352 aaKnown RBP8.33□□□□□ -1.08
GGA2YHR108W MSD1P15179 658 aaKnown RBP8.33□□□□□ -1.08
GGA2YHR108W GCD11P32481 527 aaKnown RBP8.33□□□□□ -1.08
GGA2YHR108W SIP2P34164 415 aaKnown RBP8.33□□□□□ -1.08
GGA2YHR108W TSC10P38342 320 aa8.33□□□□□ -1.08
GGA2YHR108W TRM5P38793 499 aa8.33□□□□□ -1.08
GGA2YHR108W BZZ1P38822 633 aa8.33□□□□□ -1.08
GGA2YHR108W YIL001WP40560 513 aa8.33□□□□□ -1.08
GGA2YHR108W VPS25P47142 202 aa8.33□□□□□ -1.08
GGA2YHR108W MRX6P48564 524 aa8.33□□□□□ -1.08
GGA2YHR108W CDC14Q00684 551 aa8.33□□□□□ -1.08
GGA2YHR108W OSH6Q02201 448 aa8.33□□□□□ -1.08
GGA2YHR108W ATP25Q03153 612 aa8.33□□□□□ -1.08
GGA2YHR108W ACL4Q03771 387 aa8.33□□□□□ -1.08
GGA2YHR108W HPT1Q04178 221 aaKnown RBP8.33□□□□□ -1.08
GGA2YHR108W ECM22Q05958 814 aaPredicted RBP8.33□□□□□ -1.08
GGA2YHR108W BUD20Q08004 166 aaPredicted RBP8.33□□□□□ -1.08
GGA2YHR108W SLD7Q08457 257 aa8.33□□□□□ -1.08
GGA2YHR108W DIA2Q08496 732 aaPredicted RBP8.33□□□□□ -1.08
GGA2YHR108W APC9Q12107 265 aa8.33□□□□□ -1.08
GGA2YHR108W YPR089WO13585 888 aa8.33□□□□□ -1.08
GGA2YHR108W HSC82P15108 705 aaKnown RBP8.33□□□□□ -1.08
GGA2YHR108W HSP26P15992 214 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
GGA2YHR108W DGR2P32330 852 aa8.33□□□□□ -1.08
GGA2YHR108W SPR1P32603 445 aa8.33□□□□□ -1.08
GGA2YHR108W SWE1P32944 819 aa8.33□□□□□ -1.08
GGA2YHR108W LDH1P38139 375 aa8.33□□□□□ -1.08
GGA2YHR108W KAP104P38217 918 aaKnown RBP8.33□□□□□ -1.08
GGA2YHR108W YHR182WP38870 785 aa8.33□□□□□ -1.08
GGA2YHR108W ASN2P49090 572 aaKnown RBP8.33□□□□□ -1.08
GGA2YHR108W COS6P53344 381 aa8.33□□□□□ -1.08
GGA2YHR108W BCP1Q06338 283 aa8.33□□□□□ -1.08
GGA2YHR108W RPL24AP04449 155 aaKnown RBP8.32□□□□□ -1.08
GGA2YHR108W RHO2P06781 192 aa8.32□□□□□ -1.08
GGA2YHR108W ATP1P07251 545 aaKnown RBP8.32□□□□□ -1.08
GGA2YHR108W GCD2P12754 651 aaPredicted RBP8.32□□□□□ -1.08
GGA2YHR108W ADK2P26364 225 aa8.32□□□□□ -1.08
GGA2YHR108W TFC3P34111 1160 aa8.32□□□□□ -1.08
GGA2YHR108W ATG12P38316 186 aa8.32□□□□□ -1.08
GGA2YHR108W URA8P38627 578 aaPredicted RBP8.32□□□□□ -1.08
GGA2YHR108W RIX1P38883 763 aaPredicted RBP8.32□□□□□ -1.08
GGA2YHR108W SEC31P38968 1273 aaKnown RBP8.32□□□□□ -1.08
GGA2YHR108W MGS1P40151 587 aa8.32□□□□□ -1.08
GGA2YHR108W ELO3P40319 345 aa8.32□□□□□ -1.08
GGA2YHR108W SNG1P46950 547 aa8.32□□□□□ -1.08
GGA2YHR108W NOP15P53927 220 aaPredicted RBP8.32□□□□□ -1.08
GGA2YHR108W CEG1Q01159 459 aaPredicted RBP8.32□□□□□ -1.08
GGA2YHR108W YDR476CQ03362 224 aa8.32□□□□□ -1.08
GGA2YHR108W YML083CQ04526 418 aa8.32□□□□□ -1.08
GGA2YHR108W YIG1Q08956 461 aa8.32□□□□□ -1.08
GGA2YHR108W PGC1Q08959 321 aa8.32□□□□□ -1.08
GGA2YHR108W YPR202WQ08993 238 aa8.32□□□□□ -1.08
GGA2YHR108W COX5AP00424 153 aa8.31□□□□□ -1.08
GGA2YHR108W COX6P00427 148 aa8.31□□□□□ -1.08
GGA2YHR108W ASK1P35734 292 aa8.31□□□□□ -1.08
GGA2YHR108W MRP21P38175 177 aa8.31□□□□□ -1.08
GGA2YHR108W CCT7P42943 550 aaKnown RBP8.31□□□□□ -1.08
GGA2YHR108W DLD2P46681 530 aaKnown RBP8.31□□□□□ -1.08
GGA2YHR108W TRF5P48561 642 aaKnown RBP8.31□□□□□ -1.08
GGA2YHR108W NUP84P52891 726 aa8.31□□□□□ -1.08
GGA2YHR108W DUS1P53759 423 aaKnown RBP8.31□□□□□ -1.08
GGA2YHR108W DOS2P54858 310 aa8.31□□□□□ -1.08
GGA2YHR108W TRS31Q03337 283 aa8.31□□□□□ -1.08
GGA2YHR108W CSN9Q03981 162 aa8.31□□□□□ -1.08
GGA2YHR108W SYT1Q06836 1226 aa8.31□□□□□ -1.08
GGA2YHR108W SNX3Q08826 162 aaKnown RBP8.31□□□□□ -1.08
GGA2YHR108W RUP1Q12242 671 aa8.31□□□□□ -1.08
GGA2YHR108W HES1P35843 434 aa8.3□□□□□ -1.08
GGA2YHR108W ADD66P36040 267 aa8.3□□□□□ -1.08
GGA2YHR108W SIF2P38262 535 aa8.3□□□□□ -1.08
GGA2YHR108W YBR225WP38321 900 aa8.3□□□□□ -1.08
GGA2YHR108W YHL041WP38730 149 aa8.3□□□□□ -1.08
GGA2YHR108W VAC8P39968 578 aa8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms