RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W IMA1P53051 589 aa4.29□□□□□ -1.72
PTR3YFR029W LSC1P53598 329 aaKnown RBP4.29□□□□□ -1.72
PTR3YFR029W REG1Q00816 1014 aa4.29□□□□□ -1.72
PTR3YFR029W PNG1Q02890 363 aa4.29□□□□□ -1.72
PTR3YFR029W RPC11Q04307 110 aaPredicted RBP4.29□□□□□ -1.72
PTR3YFR029W MSC3Q05812 728 aa4.29□□□□□ -1.72
PTR3YFR029W ECM7Q06200 448 aa4.29□□□□□ -1.72
PTR3YFR029W XYL2Q07993 356 aa4.29□□□□□ -1.72
PTR3YFR029W ICL2Q12031 575 aa4.29□□□□□ -1.72
PTR3YFR029W GPR1Q12361 961 aa4.29□□□□□ -1.72
PTR3YFR029W RPL1AP0CX43 217 aaKnown RBP4.28□□□□□ -1.72
PTR3YFR029W RPL1BP0CX44 217 aaKnown RBP4.28□□□□□ -1.72
PTR3YFR029W CDC24P11433 854 aaPredicted RBP4.28□□□□□ -1.72
PTR3YFR029W EST1P17214 699 aaPredicted RBP4.28□□□□□ -1.72
PTR3YFR029W MET22P32179 357 aa4.28□□□□□ -1.72
PTR3YFR029W SPC110P32380 944 aa4.28□□□□□ -1.72
PTR3YFR029W YME1P32795 747 aa4.28□□□□□ -1.72
PTR3YFR029W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
PTR3YFR029W AKL1P38080 1108 aaKnown RBP4.28□□□□□ -1.72
PTR3YFR029W OSH7P38755 437 aa4.28□□□□□ -1.72
PTR3YFR029W SGN1P40561 250 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
PTR3YFR029W BST1P43571 1029 aa4.28□□□□□ -1.72
PTR3YFR029W YGL242CP53066 181 aa4.28□□□□□ -1.72
PTR3YFR029W PEX19Q07418 342 aa4.28□□□□□ -1.72
PTR3YFR029W GPB1Q08886 897 aa4.28□□□□□ -1.72
PTR3YFR029W ELG1Q12050 791 aa4.28□□□□□ -1.72
PTR3YFR029W BUG1Q12191 341 aa4.28□□□□□ -1.72
PTR3YFR029W AFI1Q99222 893 aa4.28□□□□□ -1.72
PTR3YFR029W DIF1O13577 133 aa4.28□□□□□ -1.73
PTR3YFR029W YML002WP0CF17 737 aa4.28□□□□□ -1.73
PTR3YFR029W NAR1P23503 491 aaKnown RBP4.28□□□□□ -1.73
PTR3YFR029W SNT1P25357 1226 aa4.28□□□□□ -1.73
PTR3YFR029W YSC84P32793 468 aa4.28□□□□□ -1.73
PTR3YFR029W MSN4P33749 630 aa4.28□□□□□ -1.73
PTR3YFR029W SRB2P34162 210 aa4.28□□□□□ -1.73
PTR3YFR029W FLR1P38124 548 aa4.28□□□□□ -1.73
PTR3YFR029W YHR054CP38780 354 aa4.28□□□□□ -1.73
PTR3YFR029W RGI2P40188 164 aa4.28□□□□□ -1.73
PTR3YFR029W MET28P40573 187 aa4.28□□□□□ -1.73
PTR3YFR029W ROK1P45818 564 aaPredicted RBP4.28□□□□□ -1.73
PTR3YFR029W COG1P53079 417 aa4.28□□□□□ -1.73
PTR3YFR029W HST3P53687 447 aa4.28□□□□□ -1.73
PTR3YFR029W DSE4P53753 1117 aa4.28□□□□□ -1.73
PTR3YFR029W RPA49Q01080 415 aaPredicted RBP4.28□□□□□ -1.73
PTR3YFR029W RCR2Q03446 210 aaKnown RBP4.28□□□□□ -1.73
PTR3YFR029W STP4Q07351 490 aa4.28□□□□□ -1.73
PTR3YFR029W LUC7Q07508 261 aaPredicted RBP4.28□□□□□ -1.73
PTR3YFR029W AAD4Q07747 329 aa4.28□□□□□ -1.73
PTR3YFR029W LEU9Q12166 604 aaKnown RBP4.28□□□□□ -1.73
PTR3YFR029W SPE4Q12455 300 aa4.28□□□□□ -1.73
PTR3YFR029W RPS17AP02407 136 aaKnown RBP4.27□□□□□ -1.73
PTR3YFR029W GAL7P08431 366 aa4.27□□□□□ -1.73
PTR3YFR029W UNG1P12887 359 aa4.27□□□□□ -1.73
PTR3YFR029W RPS17BP14127 136 aaKnown RBP4.27□□□□□ -1.73
PTR3YFR029W IME1P21190 360 aa4.27□□□□□ -1.73
PTR3YFR029W ACP1P32463 125 aa4.27□□□□□ -1.73
PTR3YFR029W BPL1P48445 690 aaPredicted RBP4.27□□□□□ -1.73
PTR3YFR029W LYS5P50113 272 aa4.27□□□□□ -1.73
PTR3YFR029W CUE3P53137 624 aaKnown RBP4.27□□□□□ -1.73
PTR3YFR029W LCL3P53153 274 aa4.27□□□□□ -1.73
PTR3YFR029W GIS4Q04233 774 aa4.27□□□□□ -1.73
PTR3YFR029W RSB1Q08417 382 aa4.27□□□□□ -1.73
PTR3YFR029W RCN2Q12044 265 aa4.27□□□□□ -1.73
PTR3YFR029W YLL054CQ12244 843 aa4.27□□□□□ -1.73
PTR3YFR029W YDR461C-AQ2V2P7 80 aa4.27□□□□□ -1.73
PTR3YFR029W TDH1P00360 332 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W FBP1P09201 348 aa4.26□□□□□ -1.73
PTR3YFR029W PWP1P21304 576 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W SET5P38890 526 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W SLN1P39928 1220 aaPredicted RBP4.26□□□□□ -1.73
PTR3YFR029W TED1P40533 473 aa4.26□□□□□ -1.73
PTR3YFR029W YIR014WP40570 242 aa4.26□□□□□ -1.73
PTR3YFR029W TCO89Q08921 799 aa4.26□□□□□ -1.73
PTR3YFR029W UBX3Q12229 455 aa4.26□□□□□ -1.73
PTR3YFR029W SLP1Q12232 587 aa4.26□□□□□ -1.73
PTR3YFR029W IKI3Q06706 1349 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W RPS9AO13516 197 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W SOD2P00447 233 aa4.26□□□□□ -1.73
PTR3YFR029W URA3P03962 267 aa4.26□□□□□ -1.73
PTR3YFR029W RPS9BP05755 195 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W BIK1P11709 440 aa4.26□□□□□ -1.73
PTR3YFR029W CLB3P24870 427 aa4.26□□□□□ -1.73
PTR3YFR029W BUD5P25300 642 aaPredicted RBP4.26□□□□□ -1.73
PTR3YFR029W IMG2P25642 146 aaPredicted RBP4.26□□□□□ -1.73
PTR3YFR029W PHO11P35842 467 aa4.26□□□□□ -1.73
PTR3YFR029W ECM21P38167 1117 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W PHO12P38693 467 aa4.26□□□□□ -1.73
PTR3YFR029W PFK26P40433 827 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W RRT14P40470 206 aa4.26□□□□□ -1.73
PTR3YFR029W YIL077CP40508 320 aa4.26□□□□□ -1.73
PTR3YFR029W ALK1P43633 760 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W SMA1Q02651 245 aa4.26□□□□□ -1.73
PTR3YFR029W ADE13Q05911 482 aaKnown RBP4.26□□□□□ -1.73
PTR3YFR029W SWT1Q12104 458 aa4.26□□□□□ -1.73
PTR3YFR029W YOR022CQ12204 715 aa4.26□□□□□ -1.73
PTR3YFR029W PFK27Q12471 397 aaPredicted RBP4.26□□□□□ -1.73
PTR3YFR029W CTF3Q12748 733 aa4.26□□□□□ -1.73
PTR3YFR029W YLR302CO13544 120 aa4.25□□□□□ -1.73
PTR3YFR029W TY2A-LR1P0C2J4 438 aa4.25□□□□□ -1.73
PTR3YFR029W TY2A-FP0CX61 438 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms