RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C HMG1P12683 1054 aa2.3□□□□□ -2.04
SSD1YDR293C URA4P20051 364 aa2.3□□□□□ -2.04
SSD1YDR293C RPS7AP26786 190 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C YEL1P34225 687 aa2.3□□□□□ -2.04
SSD1YDR293C WHI3P34761 661 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C YBR071WP38243 211 aa2.3□□□□□ -2.04
SSD1YDR293C MRX1P40050 688 aa2.3□□□□□ -2.04
SSD1YDR293C JEM1P40358 645 aa2.3□□□□□ -2.04
SSD1YDR293C PRK1P40494 810 aa2.3□□□□□ -2.04
SSD1YDR293C MMM1P41800 426 aa2.3□□□□□ -2.04
SSD1YDR293C PET130P47065 347 aa2.3□□□□□ -2.04
SSD1YDR293C MTC3P53077 123 aa2.3□□□□□ -2.04
SSD1YDR293C DRN1P53255 507 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C LGE1Q02796 332 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C RLI1Q03195 608 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C MTQ2Q03920 221 aaPredicted RBP2.3□□□□□ -2.04
SSD1YDR293C NDL1Q06568 189 aa2.3□□□□□ -2.04
SSD1YDR293C PMT7Q06644 662 aa2.3□□□□□ -2.04
SSD1YDR293C CRD1Q07560 283 aa2.3□□□□□ -2.04
SSD1YDR293C AIM39Q08223 395 aa2.3□□□□□ -2.04
SSD1YDR293C LAP2Q10740 671 aa2.3□□□□□ -2.04
SSD1YDR293C NSL1Q12143 216 aa2.3□□□□□ -2.04
SSD1YDR293C YLL058WQ12198 575 aa2.3□□□□□ -2.04
SSD1YDR293C YVC1Q12324 675 aa2.3□□□□□ -2.04
SSD1YDR293C BRR1Q99177 341 aaPredicted RBP2.3□□□□□ -2.04
SSD1YDR293C SEM1O94742 89 aa2.3□□□□□ -2.04
SSD1YDR293C CMD1P06787 147 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C TY1A-LR4P0C2I8 440 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C TY1A-DR6P0CX70 440 aa2.3□□□□□ -2.04
SSD1YDR293C TY1A-ER1P0CX71 440 aa2.3□□□□□ -2.04
SSD1YDR293C TY1A-LR2P0CX72 440 aa2.3□□□□□ -2.04
SSD1YDR293C TY1A-PLP0CX73 440 aa2.3□□□□□ -2.04
SSD1YDR293C TY1A-JR1P0CX74 440 aa2.3□□□□□ -2.04
SSD1YDR293C TY1A-LR3P0CX75 440 aa2.3□□□□□ -2.04
SSD1YDR293C TY1A-ML2P0CX76 440 aa2.3□□□□□ -2.04
SSD1YDR293C HEM13P11353 328 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C HPR1P17629 752 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C ERG6P25087 383 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C PRO3P32263 286 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C ERG7P38604 731 aa2.3□□□□□ -2.04
SSD1YDR293C YLF2P38746 405 aa2.3□□□□□ -2.04
SSD1YDR293C BZZ1P38822 633 aa2.3□□□□□ -2.04
SSD1YDR293C SET5P38890 526 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C SCC4P40090 624 aa2.3□□□□□ -2.04
SSD1YDR293C DPH1P40487 425 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C LCB2P40970 561 aa2.3□□□□□ -2.04
SSD1YDR293C RPS0BP46654 252 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C BNA2P47125 453 aa2.3□□□□□ -2.04
SSD1YDR293C TRF5P48561 642 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C RFX1P48743 811 aa2.3□□□□□ -2.04
SSD1YDR293C UTP8P53276 713 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C FMP30Q02883 468 aa2.3□□□□□ -2.04
SSD1YDR293C PRP3Q03338 469 aaPredicted RBP2.3□□□□□ -2.04
SSD1YDR293C NHP10Q03435 203 aa2.3□□□□□ -2.04
SSD1YDR293C LCB5Q06147 687 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C YLR413WQ06689 675 aa2.3□□□□□ -2.04
SSD1YDR293C VIK1Q12045 647 aa2.3□□□□□ -2.04
SSD1YDR293C TY1A-GR1Q12085 440 aa2.3□□□□□ -2.04
SSD1YDR293C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C TY1A-OLQ92392 440 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C MIS1P09440 975 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C DAL7P21826 554 aa2.3□□□□□ -2.04
SSD1YDR293C SBA1P28707 216 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C CYS3P31373 394 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C BCK2P33306 851 aa2.3□□□□□ -2.04
SSD1YDR293C YKL100CP34248 587 aa2.3□□□□□ -2.04
SSD1YDR293C SWH1P35845 1188 aa2.3□□□□□ -2.04
SSD1YDR293C VHC1P38329 1120 aa2.3□□□□□ -2.04
SSD1YDR293C DIA4P38705 446 aaPredicted RBP2.3□□□□□ -2.04
SSD1YDR293C CKB2P38930 258 aa2.3□□□□□ -2.04
SSD1YDR293C YHB1P39676 399 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C SAP1P39955 897 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C YER034WP40022 185 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C YFL052WP43551 465 aa2.3□□□□□ -2.04
SSD1YDR293C ALT2P52892 507 aa2.3□□□□□ -2.04
SSD1YDR293C COQ9Q05779 260 aa2.3□□□□□ -2.04
SSD1YDR293C CUE5Q08412 411 aaKnown RBP2.3□□□□□ -2.04
SSD1YDR293C IES4Q08561 116 aa2.3□□□□□ -2.04
SSD1YDR293C UAF30Q08747 228 aa2.3□□□□□ -2.04
SSD1YDR293C ICL2Q12031 575 aa2.3□□□□□ -2.04
SSD1YDR293C AMS1P22855 1083 aa2.29□□□□□ -2.04
SSD1YDR293C TKL1P23254 680 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C HRR25P29295 494 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C RDH54P38086 958 aa2.29□□□□□ -2.04
SSD1YDR293C FMP23P38231 175 aa2.29□□□□□ -2.04
SSD1YDR293C YHL012WP38709 493 aa2.29□□□□□ -2.04
SSD1YDR293C YIL165CP40446 119 aa2.29□□□□□ -2.04
SSD1YDR293C MET18P40469 1032 aa2.29□□□□□ -2.04
SSD1YDR293C MPH1P40562 993 aa2.29□□□□□ -2.04
SSD1YDR293C GPI8P49018 411 aa2.29□□□□□ -2.04
SSD1YDR293C NNF2P53253 936 aa2.29□□□□□ -2.04
SSD1YDR293C SLM2P53955 656 aa2.29□□□□□ -2.04
SSD1YDR293C YMR102CQ03177 834 aa2.29□□□□□ -2.04
SSD1YDR293C AIM32Q04689 311 aa2.29□□□□□ -2.04
SSD1YDR293C YDR222WQ04925 415 aa2.29□□□□□ -2.04
SSD1YDR293C TY1A-DR3Q12441 440 aa2.29□□□□□ -2.04
SSD1YDR293C KCS1Q12494 1050 aa2.29□□□□□ -2.04
SSD1YDR293C BI4P03879 638 aa2.29□□□□□ -2.04
SSD1YDR293C CBP1P07252 654 aa2.29□□□□□ -2.04
SSD1YDR293C ENA1P13587 1091 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 101 ms