RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL228C	YDL228C	SEC63	P14906	663 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	CYC8	P14922	966 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	ERS1	P17261	260 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	MET16	P18408	261 aa	Predicted RBP	4.23	□□□□□ -1.73
YDL228C	YDL228C	NPR1	P22211	790 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	RAD57	P25301	460 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	YCR015C	P25616	317 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	HXT3	P32466	567 aa	Known RBP	4.23	□□□□□ -1.73
YDL228C	YDL228C	SEC6	P32844	805 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	SGE1	P33335	543 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	SWC5	P38326	303 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	FSH1	P38777	243 aa	Known RBP	4.23	□□□□□ -1.73
YDL228C	YDL228C	GGA2	P38817	585 aa	Known RBP	4.23	□□□□□ -1.73
YDL228C	YDL228C	LAM1	P38851	1228 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	SAK1	P38990	1142 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	KHA1	P40309	873 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	NEO1	P40527	1151 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	RRT5	P43607	289 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	CNN1	P43618	361 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	RSM26	P47141	266 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	AMA1	P50082	593 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	BUD9	P53226	547 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	SXM1	Q04175	944 aa	Known RBP	4.23	□□□□□ -1.73
YDL228C	YDL228C	SOV1	Q04748	898 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	YCG1	Q06680	1035 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	AAD4	Q07747	329 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	PEX15	Q08215	383 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	RSB1	Q08417	382 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	YPR053C	Q6Q5F3	151 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	NUM1	Q00402	2748 aa		4.23	□□□□□ -1.73
YDL228C	YDL228C	RAD10	P06838	210 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	YPK1	P12688	680 aa	Known RBP	4.22	□□□□□ -1.73
YDL228C	YDL228C	HXT1	P32465	570 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	TCD2	P36101	447 aa	Known RBP	4.22	□□□□□ -1.73
YDL228C	YDL228C	MIC60	P36112	540 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	RRT2	P38332	387 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	FMO1	P38866	432 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	PRM9	P39551	298 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	ERP2	P39704	215 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	GIP4	P39732	760 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	EXO1	P39875	702 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	OSW5	P40219	148 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	EFM4	P40516	257 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	SAP185	P40856	1058 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	BST1	P43571	1029 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	ALY2	P47029	1046 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	YJR079W	P47126	109 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	MRX6	P48564	524 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	BRO1	P48582	844 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	PRP24	P49960	444 aa	Known RBP	4.22	□□□□□ -1.73
YDL228C	YDL228C	TAN1	P53072	289 aa	Predicted RBP	4.22	□□□□□ -1.73
YDL228C	YDL228C	FLC3	P53121	802 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	NPY1	P53164	384 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	PEX31	P53203	462 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	TDA7	P53882	636 aa	Predicted RBP	4.22	□□□□□ -1.73
YDL228C	YDL228C	YNL040W	P53960	456 aa	Predicted RBP	4.22	□□□□□ -1.73
YDL228C	YDL228C	YMR018W	Q04364	514 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	UFO1	Q04511	668 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	SPR28	Q04921	423 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	MFB1	Q04922	465 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	YSH1	Q06224	779 aa	Predicted RBP	4.22	□□□□□ -1.73
YDL228C	YDL228C	YLR012C	Q07927	99 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	THI21	Q08975	551 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	PER33	Q12144	273 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	IZH4	Q99393	312 aa		4.22	□□□□□ -1.73
YDL228C	YDL228C	TY4B-P	A0A0B7P3V8	1104 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	RPS9A	O13516	197 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	CLC1	P17891	233 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	ADY2	P25613	283 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	MEI4	P29467	408 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	MCM5	P29496	775 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	DBF4	P32325	704 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	STE13	P33894	931 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	BLI1	P35727	113 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	HIS2	P38635	335 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	WSC4	P38739	605 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	TCD1	P38756	429 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	CRP1	P38845	465 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	SEC9	P40357	651 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	ASN2	P49090	572 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	PYK2	P52489	506 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YDL228C	YDL228C	NOG2	P53742	486 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	PIR1	Q03178	341 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	YMR187C	Q03236	431 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	ADI1	Q03677	179 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	ATG16	Q03818	150 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	INP2	Q03824	705 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	RKM2	Q03942	479 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	SND1	Q04007	877 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	UTP5	Q04177	643 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	ERV41	Q04651	352 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	DAL4	Q04895	635 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	IVY1	Q04934	453 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	HEL2	Q05580	639 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	VPS38	Q05919	439 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	KAP95	Q06142	861 aa	Known RBP	4.21	□□□□□ -1.74
YDL228C	YDL228C	OPY2	Q06810	360 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	CIR2	Q08822	631 aa		4.21	□□□□□ -1.74
YDL228C	YDL228C	DAS2	Q12084	232 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms