RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W MEF2P39677 819 aa2.89□□□□□ -1.95
SPB1YCL054W GPD2P41911 440 aaKnown RBP2.89□□□□□ -1.95
SPB1YCL054W SQS1P53866 767 aaKnown RBP2.89□□□□□ -1.95
SPB1YCL054W YPL071CQ02864 156 aa2.89□□□□□ -1.95
SPB1YCL054W YAP6Q03935 383 aa2.89□□□□□ -1.95
SPB1YCL054W PPN1Q04119 674 aa2.89□□□□□ -1.95
SPB1YCL054W YFT2Q06676 274 aa2.89□□□□□ -1.95
SPB1YCL054W PCK1P10963 549 aa2.89□□□□□ -1.95
SPB1YCL054W KAR3P17119 729 aa2.89□□□□□ -1.95
SPB1YCL054W RPC53P25441 422 aa2.89□□□□□ -1.95
SPB1YCL054W KAR4P25583 335 aa2.89□□□□□ -1.95
SPB1YCL054W VMA8P32610 256 aaKnown RBP2.89□□□□□ -1.95
SPB1YCL054W TSA1P34760 196 aaKnown RBP2.89□□□□□ -1.95
SPB1YCL054W PES4P39684 611 aa2.89□□□□□ -1.95
SPB1YCL054W BUD16P39988 312 aa2.89□□□□□ -1.95
SPB1YCL054W ARB1P40024 610 aaKnown RBP2.89□□□□□ -1.95
SPB1YCL054W LRO1P40345 661 aa2.89□□□□□ -1.95
SPB1YCL054W CAB2P40506 365 aa2.89□□□□□ -1.95
SPB1YCL054W DUO1P53168 247 aaKnown RBP2.89□□□□□ -1.95
SPB1YCL054W COX18P53239 316 aa2.89□□□□□ -1.95
SPB1YCL054W NGL3Q03210 505 aa2.89□□□□□ -1.95
SPB1YCL054W GRX3Q03835 250 aa2.89□□□□□ -1.95
SPB1YCL054W YDR132CQ03900 495 aa2.89□□□□□ -1.95
SPB1YCL054W RRG1Q12167 365 aaPredicted RBP2.89□□□□□ -1.95
SPB1YCL054W TRM11Q12463 433 aa2.89□□□□□ -1.95
SPB1YCL054W TY2A-LR1P0C2J4 438 aa2.88□□□□□ -1.95
SPB1YCL054W TY2A-FP0CX61 438 aa2.88□□□□□ -1.95
SPB1YCL054W TY2A-GR2P0CX62 438 aa2.88□□□□□ -1.95
SPB1YCL054W TY2A-CP25383 438 aa2.88□□□□□ -1.95
SPB1YCL054W FEN2P25621 512 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W RPS7AP26786 190 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W DCG1P32460 244 aa2.88□□□□□ -1.95
SPB1YCL054W BCS1P32839 456 aa2.88□□□□□ -1.95
SPB1YCL054W MUM2P38236 366 aa2.88□□□□□ -1.95
SPB1YCL054W FMO1P38866 432 aa2.88□□□□□ -1.95
SPB1YCL054W VFA1P40080 203 aa2.88□□□□□ -1.95
SPB1YCL054W COG1P53079 417 aa2.88□□□□□ -1.95
SPB1YCL054W SPO1P53541 631 aa2.88□□□□□ -1.95
SPB1YCL054W BSC5P53755 489 aa2.88□□□□□ -1.95
SPB1YCL054W FDC1Q03034 503 aa2.88□□□□□ -1.95
SPB1YCL054W TY2A-DR2Q03483 438 aa2.88□□□□□ -1.95
SPB1YCL054W YDR131CQ03899 556 aa2.88□□□□□ -1.95
SPB1YCL054W SPC19Q03954 165 aa2.88□□□□□ -1.95
SPB1YCL054W PDS5Q04264 1277 aa2.88□□□□□ -1.95
SPB1YCL054W STP3Q05937 343 aa2.88□□□□□ -1.95
SPB1YCL054W NOP12Q08208 459 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W TY2A-BQ12260 438 aa2.88□□□□□ -1.95
SPB1YCL054W TY2A-OR2Q12293 438 aa2.88□□□□□ -1.95
SPB1YCL054W TY2A-DR1Q12392 438 aa2.88□□□□□ -1.95
SPB1YCL054W TY2A-OR1Q12439 438 aa2.88□□□□□ -1.95
SPB1YCL054W TY2A-DR3Q99303 438 aa2.88□□□□□ -1.95
SPB1YCL054W AUS1Q08409 1394 aa2.88□□□□□ -1.95
SPB1YCL054W YLR358CO13565 187 aa2.88□□□□□ -1.95
SPB1YCL054W TUB2P02557 457 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W RPP2AP05319 106 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W MET17P06106 444 aa2.88□□□□□ -1.95
SPB1YCL054W ILS1P09436 1072 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W PRP22P24384 1145 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W ROX1P25042 368 aa2.88□□□□□ -1.95
SPB1YCL054W KIN82P25341 720 aa2.88□□□□□ -1.95
SPB1YCL054W SAC6P32599 642 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W TOD6P34219 525 aa2.88□□□□□ -1.95
SPB1YCL054W TEF4P36008 412 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W COS111P38308 924 aa2.88□□□□□ -1.95
SPB1YCL054W LTP1P40347 161 aa2.88□□□□□ -1.95
SPB1YCL054W YJR061WP40355 935 aa2.88□□□□□ -1.95
SPB1YCL054W AXL1P40851 1208 aa2.88□□□□□ -1.95
SPB1YCL054W BUL1P48524 976 aa2.88□□□□□ -1.95
SPB1YCL054W MRX6P48564 524 aa2.88□□□□□ -1.95
SPB1YCL054W VPS75P53853 264 aa2.88□□□□□ -1.95
SPB1YCL054W ADE16P54113 591 aaKnown RBP2.88□□□□□ -1.95
SPB1YCL054W SYF1Q04048 859 aaPredicted RBP2.88□□□□□ -1.95
SPB1YCL054W PSR1Q07800 427 aa2.88□□□□□ -1.95
SPB1YCL054W ENT4Q07872 247 aa2.88□□□□□ -1.95
SPB1YCL054W MHP1P43638 1398 aa2.87□□□□□ -1.95
SPB1YCL054W CKA1P15790 372 aa2.87□□□□□ -1.95
SPB1YCL054W PRE10P21242 288 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
SPB1YCL054W CDC20P26309 610 aa2.87□□□□□ -1.95
SPB1YCL054W SWI3P32591 825 aa2.87□□□□□ -1.95
SPB1YCL054W MTH1P35198 433 aa2.87□□□□□ -1.95
SPB1YCL054W YBR053CP38235 358 aa2.87□□□□□ -1.95
SPB1YCL054W HRB1P38922 454 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
SPB1YCL054W YIL077CP40508 320 aa2.87□□□□□ -1.95
SPB1YCL054W RFX1P48743 811 aa2.87□□□□□ -1.95
SPB1YCL054W MDR1P53258 950 aa2.87□□□□□ -1.95
SPB1YCL054W NRG1Q03125 231 aa2.87□□□□□ -1.95
SPB1YCL054W VCX1Q99385 411 aa2.87□□□□□ -1.95
SPB1YCL054W SEC3P33332 1336 aaKnown RBP2.87□□□□□ -1.95
SPB1YCL054W EDE1P34216 1381 aa2.87□□□□□ -1.95
SPB1YCL054W CET1O13297 549 aaPredicted RBP2.87□□□□□ -1.95
SPB1YCL054W ARG3P05150 338 aa2.87□□□□□ -1.95
SPB1YCL054W RPS9BP05755 195 aaKnown RBP2.87□□□□□ -1.95
SPB1YCL054W NAT1P12945 854 aaKnown RBP2.87□□□□□ -1.95
SPB1YCL054W VPS33P20795 691 aa2.87□□□□□ -1.95
SPB1YCL054W UME6P39001 836 aa2.87□□□□□ -1.95
SPB1YCL054W PLB1P39105 664 aa2.87□□□□□ -1.95
SPB1YCL054W ARC1P46672 376 aaKnown RBP2.87□□□□□ -1.95
SPB1YCL054W PIL1P53252 339 aaKnown RBP2.87□□□□□ -1.95
SPB1YCL054W INN1P53901 409 aa2.87□□□□□ -1.95
SPB1YCL054W VPS64Q03944 604 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms