RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W HXT3P32466 567 aaKnown RBP6.58□□□□□ -1.36
LDB16YCL005W RAD5P32849 1169 aaPredicted RBP6.58□□□□□ -1.36
LDB16YCL005W NMD3P38861 518 aaKnown RBP6.58□□□□□ -1.36
LDB16YCL005W CDC1P40986 491 aa6.58□□□□□ -1.36
LDB16YCL005W MRPS18P42847 217 aa6.58□□□□□ -1.36
LDB16YCL005W YFL040WP43562 540 aa6.58□□□□□ -1.36
LDB16YCL005W TAF1P46677 1066 aa6.58□□□□□ -1.36
LDB16YCL005W GUF1P46943 645 aa6.58□□□□□ -1.36
LDB16YCL005W SAE2P46946 345 aa6.58□□□□□ -1.36
LDB16YCL005W BIO5P53744 561 aaKnown RBP6.58□□□□□ -1.36
LDB16YCL005W IMA2Q08295 589 aa6.58□□□□□ -1.36
LDB16YCL005W VHS3Q08438 674 aa6.58□□□□□ -1.36
LDB16YCL005W NCA2Q12374 616 aa6.58□□□□□ -1.36
LDB16YCL005W UBR2Q07963 1872 aa6.58□□□□□ -1.36
LDB16YCL005W YLR422WQ06409 1932 aa6.57□□□□□ -1.36
LDB16YCL005W ATP1P07251 545 aaKnown RBP6.57□□□□□ -1.36
LDB16YCL005W ILS1P09436 1072 aaKnown RBP6.57□□□□□ -1.36
LDB16YCL005W SRV2P17555 526 aaKnown RBP6.57□□□□□ -1.36
LDB16YCL005W CDC10P25342 322 aaKnown RBP6.57□□□□□ -1.36
LDB16YCL005W PEP7P32609 515 aa6.57□□□□□ -1.36
LDB16YCL005W YBR284WP38150 797 aa6.57□□□□□ -1.36
LDB16YCL005W SPC97P38863 823 aa6.57□□□□□ -1.36
LDB16YCL005W AIM18P38884 321 aa6.57□□□□□ -1.36
LDB16YCL005W PRM9P39551 298 aa6.57□□□□□ -1.36
LDB16YCL005W RAD26P40352 1085 aa6.57□□□□□ -1.36
LDB16YCL005W OPT1P40897 799 aa6.57□□□□□ -1.36
LDB16YCL005W LEM3P42838 414 aa6.57□□□□□ -1.36
LDB16YCL005W RRT5P43607 289 aa6.57□□□□□ -1.36
LDB16YCL005W YGL140CP53120 1219 aa6.57□□□□□ -1.36
LDB16YCL005W MON1P53129 644 aa6.57□□□□□ -1.36
LDB16YCL005W KTR6P54070 446 aa6.57□□□□□ -1.36
LDB16YCL005W VPS9P54787 451 aa6.57□□□□□ -1.36
LDB16YCL005W ADA2Q02336 434 aa6.57□□□□□ -1.36
LDB16YCL005W INA17Q02888 182 aa6.57□□□□□ -1.36
LDB16YCL005W SPR28Q04921 423 aa6.57□□□□□ -1.36
LDB16YCL005W FAR8Q05040 523 aa6.57□□□□□ -1.36
LDB16YCL005W HRD3Q05787 833 aa6.57□□□□□ -1.36
LDB16YCL005W SOG2Q08817 791 aa6.57□□□□□ -1.36
LDB16YCL005W GLO4Q12320 285 aa6.57□□□□□ -1.36
LDB16YCL005W HRT3Q12347 344 aa6.57□□□□□ -1.36
LDB16YCL005W ARP7Q12406 477 aa6.57□□□□□ -1.36
LDB16YCL005W PAB1P04147 577 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
LDB16YCL005W CLB1P24868 471 aa6.56□□□□□ -1.36
LDB16YCL005W LOS1P33418 1100 aaPredicted RBP6.56□□□□□ -1.36
LDB16YCL005W BIT2P38346 545 aa6.56□□□□□ -1.36
LDB16YCL005W RIM11P38615 370 aa6.56□□□□□ -1.36
LDB16YCL005W SMF2P38778 549 aa6.56□□□□□ -1.36
LDB16YCL005W REV7P38927 245 aa6.56□□□□□ -1.36
LDB16YCL005W STL1P39932 569 aa6.56□□□□□ -1.36
LDB16YCL005W VPS25P47142 202 aa6.56□□□□□ -1.36
LDB16YCL005W YGR127WP53275 312 aa6.56□□□□□ -1.36
LDB16YCL005W MTD1Q02046 320 aaKnown RBP6.56□□□□□ -1.36
LDB16YCL005W SPG3Q04398 127 aaPredicted RBP6.56□□□□□ -1.36
LDB16YCL005W AIM32Q04689 311 aa6.56□□□□□ -1.36
LDB16YCL005W ADE13Q05911 482 aaKnown RBP6.56□□□□□ -1.36
LDB16YCL005W AAD15Q08361 143 aa6.56□□□□□ -1.36
LDB16YCL005W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
LDB16YCL005W LEA1Q08963 238 aaPredicted RBP6.56□□□□□ -1.36
LDB16YCL005W SPE3Q12074 293 aaKnown RBP6.56□□□□□ -1.36
LDB16YCL005W EFG1Q3E705 233 aaKnown RBP6.56□□□□□ -1.36
LDB16YCL005W APM4Q99186 491 aa6.56□□□□□ -1.36
LDB16YCL005W AI5_ALPHAQ9ZZX1 630 aa6.56□□□□□ -1.36
LDB16YCL005W NPR1P22211 790 aa6.55□□□□□ -1.36
LDB16YCL005W CAD1P24813 409 aaKnown RBP6.55□□□□□ -1.36
LDB16YCL005W YIH1P25637 258 aa6.55□□□□□ -1.36
LDB16YCL005W MCM5P29496 775 aaKnown RBP6.55□□□□□ -1.36
LDB16YCL005W KES1P35844 434 aaKnown RBP6.55□□□□□ -1.36
LDB16YCL005W SET3P36124 751 aa6.55□□□□□ -1.36
LDB16YCL005W YBR056WP38081 501 aa6.55□□□□□ -1.36
LDB16YCL005W OTU2P38747 307 aaKnown RBP6.55□□□□□ -1.36
LDB16YCL005W FSH1P38777 243 aaKnown RBP6.55□□□□□ -1.36
LDB16YCL005W LAM1P38851 1228 aa6.55□□□□□ -1.36
LDB16YCL005W SHU2P38957 223 aa6.55□□□□□ -1.36
LDB16YCL005W FAA3P39002 694 aa6.55□□□□□ -1.36
LDB16YCL005W FHL1P39521 936 aa6.55□□□□□ -1.36
LDB16YCL005W YJL132WP47014 750 aa6.55□□□□□ -1.36
LDB16YCL005W IML2P47031 731 aa6.55□□□□□ -1.36
LDB16YCL005W TAH11P47112 604 aa6.55□□□□□ -1.36
LDB16YCL005W YPR003CP53394 754 aa6.55□□□□□ -1.36
LDB16YCL005W COP1P53622 1201 aaKnown RBP6.55□□□□□ -1.36
LDB16YCL005W MRI1Q06489 411 aaKnown RBP6.55□□□□□ -1.36
LDB16YCL005W NRT1Q08485 598 aa6.55□□□□□ -1.36
LDB16YCL005W GPM3Q12326 303 aa6.55□□□□□ -1.36
LDB16YCL005W TAO3P40468 2376 aa6.54□□□□□ -1.36
LDB16YCL005W GPM1P00950 247 aaKnown RBP6.54□□□□□ -1.36
LDB16YCL005W PDC5P16467 563 aaKnown RBP6.54□□□□□ -1.36
LDB16YCL005W MET16P18408 261 aaPredicted RBP6.54□□□□□ -1.36
LDB16YCL005W PRE9P23638 258 aaKnown RBP6.54□□□□□ -1.36
LDB16YCL005W CDC20P26309 610 aa6.54□□□□□ -1.36
LDB16YCL005W DSS4P32601 143 aa6.54□□□□□ -1.36
LDB16YCL005W PEX5P35056 612 aa6.54□□□□□ -1.36
LDB16YCL005W RIM4P38741 713 aa6.54□□□□□ -1.36
LDB16YCL005W YPL109CQ02981 657 aa6.54□□□□□ -1.36
LDB16YCL005W YML119WQ03208 357 aa6.54□□□□□ -1.36
LDB16YCL005W ADI1Q03677 179 aa6.54□□□□□ -1.36
LDB16YCL005W GRX8Q05926 109 aa6.54□□□□□ -1.36
LDB16YCL005W CUE5Q08412 411 aaKnown RBP6.54□□□□□ -1.36
LDB16YCL005W HOS1Q12214 470 aa6.54□□□□□ -1.36
LDB16YCL005W CMR1Q12510 522 aaKnown RBP6.54□□□□□ -1.36
LDB16YCL005W TEF1P02994 458 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms