RNA–Protein interactions for RNA: YBR073W

RDH54, Transcript of DNA-dependent ATPase, yeast

Gene RDH54, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDH54	YBR073W	GLO4	Q12320	285 aa		4.22	□□□□□ -1.73
RDH54	YBR073W	BPT1	P14772	1559 aa		4.22	□□□□□ -1.73
RDH54	YBR073W	RPL1A	P0CX43	217 aa	Known RBP	4.22	□□□□□ -1.73
RDH54	YBR073W	RPL1B	P0CX44	217 aa	Known RBP	4.22	□□□□□ -1.73
RDH54	YBR073W	MSB1	P21339	1137 aa	Known RBP	4.22	□□□□□ -1.73
RDH54	YBR073W	BUD5	P25300	642 aa	Predicted RBP	4.22	□□□□□ -1.73
RDH54	YBR073W	PAP1	P29468	568 aa	Known RBP	4.22	□□□□□ -1.73
RDH54	YBR073W	ERG1	P32476	496 aa	Known RBP	4.22	□□□□□ -1.73
RDH54	YBR073W	NGG1	P32494	702 aa		4.22	□□□□□ -1.73
RDH54	YBR073W	UBC6	P33296	250 aa	Predicted RBP	4.22	□□□□□ -1.73
RDH54	YBR073W	STT3	P39007	718 aa	Known RBP	4.22	□□□□□ -1.73
RDH54	YBR073W	ARF3	P40994	183 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
RDH54	YBR073W	YSA1	Q01976	231 aa		4.22	□□□□□ -1.73
RDH54	YBR073W	FMP45	Q07651	309 aa		4.22	□□□□□ -1.73
RDH54	YBR073W	MET32	Q12041	191 aa		4.22	□□□□□ -1.73
RDH54	YBR073W	DCS2	Q12123	353 aa		4.22	□□□□□ -1.73
RDH54	YBR073W	RPP2B	P02400	110 aa	Known RBP	4.21	□□□□□ -1.73
RDH54	YBR073W	POL3	P15436	1097 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	EMC1	P25574	760 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	HXT1	P32465	570 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	HOG1	P32485	435 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	ALG3	P38179	458 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	SMF1	P38925	575 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	PSP1	P50896	841 aa	Known RBP	4.21	□□□□□ -1.73
RDH54	YBR073W	PAN2	P53010	1115 aa	Predicted RBP	4.21	□□□□□ -1.73
RDH54	YBR073W	YGR283C	P53336	341 aa	Predicted RBP	4.21	□□□□□ -1.73
RDH54	YBR073W	SPO19	Q03029	223 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	IRC4	Q03036	179 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	ATP25	Q03153	612 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	CLU1	Q03690	1277 aa	Known RBP	4.21	□□□□□ -1.73
RDH54	YBR073W	RSC3	Q06639	885 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	SWT1	Q12104	458 aa		4.21	□□□□□ -1.73
RDH54	YBR073W	YML133C	Q03099	1374 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	YLL066C	Q99208	1374 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	INO1	P11986	533 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	CLB4	P24871	460 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	CDC15	P27636	974 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	CDC12	P32468	407 aa	Known RBP	4.21	□□□□□ -1.74
RDH54	YBR073W	ELM1	P32801	640 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	YBR139W	P38109	508 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	OPY1	P38271	328 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	RTR1	P40084	226 aa	Predicted RBP	4.21	□□□□□ -1.74
RDH54	YBR073W	CHS6	P40955	746 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	MAD2	P40958	196 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	CDC40	P40968	455 aa	Predicted RBP	4.21	□□□□□ -1.74
RDH54	YBR073W	ERG10	P41338	398 aa	Known RBP	4.21	□□□□□ -1.74
RDH54	YBR073W	RSM26	P47141	266 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	ARP10	Q04549	284 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	NDL1	Q06568	189 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	GSH2	Q08220	491 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	TIP41	Q12199	356 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	KCS1	Q12494	1050 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	ECM5	Q03214	1411 aa		4.21	□□□□□ -1.74
RDH54	YBR073W	TEF1	P02994	458 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	GCN4	P03069	281 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	THR4	P16120	514 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	PRP2	P20095	876 aa	Predicted RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	CPR2	P23285	205 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	GSY1	P23337	708 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	UGA2	P38067	497 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	GIP4	P39732	760 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	YRB2	P40517	327 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	NCS6	P53088	359 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	YCG1	Q06680	1035 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	UAF30	Q08747	228 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	CDC36	P06100	191 aa	Predicted RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	RPL35A	P0CX84	120 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	RPL35B	P0CX85	120 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	TCP1	P12612	559 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	FUS3	P16892	353 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	PRD1	P25375	712 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	MSP1	P28737	362 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	MEI5	P32489	222 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	DLD3	P39976	496 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	MET28	P40573	187 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	OTU1	P43558	301 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	YNL146W	P53906	100 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	PEX13	P80667	386 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	SMA1	Q02651	245 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	SOV1	Q04748	898 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	TSR1	Q07381	788 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	CTI6	Q08923	506 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	YPR027C	Q12079	277 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	DIN7	Q12086	430 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	RTK1	Q12100	620 aa	Predicted RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	UBX3	Q12229	455 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	YRF1-4	O13559	1382 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	TUB3	P09734	445 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	HEM1	P09950	548 aa	Predicted RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	RPS24A	P0CX31	135 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	RPS24B	P0CX32	135 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	FUS1	P11710	512 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	KSS1	P14681	368 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	YPK2	P18961	677 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	AFG1	P32317	509 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	YTA12	P40341	825 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	RMR1	P53060	241 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	NOG2	P53742	486 aa	Known RBP	4.2	□□□□□ -1.74
RDH54	YBR073W	PRM1	P53835	661 aa		4.2	□□□□□ -1.74
RDH54	YBR073W	PGA2	P53903	129 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms