RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 MTMR6Q9Y217 621 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.33□□□□□ -0.76
PHGDH-219ENST00000641513 ATP6V1DQ9Y5K8 247 aa10.33□□□□□ -0.76
PHGDH-219ENST00000641513 COL4A5P29400 1685 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 ROBO3Q96MS0 1386 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 PSMD14O00487 310 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 TSPY3P0CV98 308 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 TSPY8P0CW00 308 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 NCLP19338 710 aaKnown RBP10.32□□□□□ -0.76
PHGDH-219ENST00000641513 CLCN1P35523 988 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 PTGER2P43116 358 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 PLCD1P51178 756 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 HDLBPQ00341 1268 aaKnown RBP10.32□□□□□ -0.76
PHGDH-219ENST00000641513 TFAP4Q01664 338 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 RTN1Q16799 776 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 RSBN1LQ6PCB5 846 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-219ENST00000641513 CATIPQ7Z7H3 387 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 TTC6Q86TZ1 520 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 FERMT3Q86UX7 667 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 SGMS1Q86VZ5 419 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 ZNF654Q8IZM8 581 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 JDP2Q8WYK2 163 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 ANP32BQ92688 251 aaKnown RBP10.32□□□□□ -0.76
PHGDH-219ENST00000641513 CHAMP1Q96JM3 812 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 ZDHHC15Q96MV8 337 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 SGIP1Q9BQI5 828 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 VPS33BQ9H267 617 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 SPON1Q9HCB6 807 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-219ENST00000641513 ORC3Q9UBD5 711 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-219ENST00000641513 HDAC9Q9UKV0 1011 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 ZNRF3Q9ULT6 936 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 SIPA1L1O43166 1804 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 SBF1O95248 1867 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 MYO3BQ8WXR4 1341 aa10.32□□□□□ -0.76
PHGDH-219ENST00000641513 NMT2O60551 498 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 HLA-DOAP06340 250 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 FGRP09769 529 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 ADD1P35611 737 aaKnown RBP10.31□□□□□ -0.76
PHGDH-219ENST00000641513 CDK8P49336 464 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 GUCY1B3Q02153 619 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 TCP10Q12799 353 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 SEC23AQ15436 765 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 CSPP1Q1MSJ5 1256 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 ZSCAN23Q3MJ62 389 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 CFAP100Q494V2 611 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 APOBEC3HQ6NTF7 200 aaKnown RBP10.31□□□□□ -0.76
PHGDH-219ENST00000641513 CDC37L1Q7L3B6 337 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 ZSCAN29Q8IWY8 852 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-219ENST00000641513 ENAHQ8N8S7 591 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-219ENST00000641513 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 TRIM34Q9BYJ4 488 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 TMOD2Q9NZR1 351 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 SERPINA10Q9UK55 444 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 PCDHAC2Q9Y5I4 1007 aa10.31□□□□□ -0.76
PHGDH-219ENST00000641513 BAZ2BQ9UIF8 2168 aaKnown RBP10.31□□□□□ -0.76
PHGDH-219ENST00000641513 CCDC196A0A1B0GTZ2 297 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 PRPF40AO75400 957 aaKnown RBP10.3□□□□□ -0.76
PHGDH-219ENST00000641513 WDHD1O75717 1129 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-219ENST00000641513 CDC27P30260 824 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 NASPP49321 788 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-219ENST00000641513 CACNB3P54284 484 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 SSRP1Q08945 709 aaKnown RBP10.3□□□□□ -0.76
PHGDH-219ENST00000641513 CCDC178Q5BJE1 867 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 C16orf86Q6ZW13 317 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 GAS2L3Q86XJ1 694 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 OGFOD1Q8N543 542 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 NLGN2Q8NFZ4 835 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 CNKSR2Q8WXI2 1034 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 C8orf76Q96K31 380 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 MRIQ9BWK5 157 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 SLC26A6Q9BXS9 759 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 OSBPL5Q9H0X9 879 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-219ENST00000641513 TDRD3Q9H7E2 651 aaKnown RBP10.3□□□□□ -0.76
PHGDH-219ENST00000641513 KAT14Q9H8E8 782 aa10.3□□□□□ -0.76
PHGDH-219ENST00000641513 DDX4Q9NQI0 724 aaKnown RBP10.3□□□□□ -0.76
PHGDH-219ENST00000641513 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-219ENST00000641513 LETM1O95202 739 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-219ENST00000641513 VIL1P09327 827 aaKnown RBP10.29□□□□□ -0.76
PHGDH-219ENST00000641513 CALM1P0DP23 149 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 CALM2P0DP24 149 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 CALM3P0DP25 149 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 RASA1P20936 1047 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 NT5C2P49902 561 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
PHGDH-219ENST00000641513 RASSF7Q02833 373 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 NFIAQ12857 509 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 TRIM29Q14134 588 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 DLGAP5Q15398 846 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 CIAPIN1Q6FI81 312 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 LRSAM1Q6UWE0 723 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 TRIM22Q8IYM9 498 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 CRACR2BQ8N4Y2 399 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-219ENST00000641513 FANCBQ8NB91 859 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 GPT2Q8TD30 523 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 PHKBQ93100 1093 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 PANK2Q9BZ23 570 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms