RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 ARMCX6Q7L4S7 300 aa8.95□□□□□ -0.98
RTTN-217ENST00000640393 MCATQ8IVS2 390 aaKnown RBP8.95□□□□□ -0.98
RTTN-217ENST00000640393 TOP6BLQ8N6T0 577 aa8.95□□□□□ -0.98
RTTN-217ENST00000640393 CPLX3Q8WVH0 158 aa8.95□□□□□ -0.98
RTTN-217ENST00000640393 TACC3Q9Y6A5 838 aa8.95□□□□□ -0.98
RTTN-217ENST00000640393 F13BP05160 661 aa8.94□□□□□ -0.98
RTTN-217ENST00000640393 MLECQ14165 292 aa8.94□□□□□ -0.98
RTTN-217ENST00000640393 NAALADL2Q58DX5 795 aa8.94□□□□□ -0.98
RTTN-217ENST00000640393 ZAR1Q86SH2 424 aa8.94□□□□□ -0.98
RTTN-217ENST00000640393 RIN3Q8TB24 985 aa8.94□□□□□ -0.98
RTTN-217ENST00000640393 SHKBP1Q8TBC3 707 aa8.94□□□□□ -0.98
RTTN-217ENST00000640393 ATG3Q9NT62 314 aa8.94□□□□□ -0.98
RTTN-217ENST00000640393 DNAJA2O60884 412 aa8.93□□□□□ -0.98
RTTN-217ENST00000640393 GJA8P48165 433 aa8.93□□□□□ -0.98
RTTN-217ENST00000640393 SLC6A19Q695T7 634 aa8.93□□□□□ -0.98
RTTN-217ENST00000640393 GIMAP7Q8NHV1 300 aa8.93□□□□□ -0.98
RTTN-217ENST00000640393 MIPEPQ99797 713 aa8.93□□□□□ -0.98
RTTN-217ENST00000640393 DBNDD2Q9BQY9 259 aa8.93□□□□□ -0.98
RTTN-217ENST00000640393 ADAM30Q9UKF2 790 aa8.93□□□□□ -0.98
RTTN-217ENST00000640393 PRR36Q9H6K5 1346 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 FAM86C2PA6NEL3 165 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 SLC22A31A6NKX4 558 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 LRIG2O94898 1065 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
RTTN-217ENST00000640393 ARSHQ5FYA8 562 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 DUSP27Q5VZP5 1158 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 ZNF765Q7L2R6 523 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 CDH24Q86UP0 819 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 PHACTR4Q8IZ21 702 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 REXO1Q8N1G1 1221 aaKnown RBP8.92□□□□□ -0.98
RTTN-217ENST00000640393 TINF2Q9BSI4 451 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 OSBPL1AQ9BXW6 950 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 EHMT1Q9H9B1 1298 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 PRDM10Q9NQV6 1147 aa8.92□□□□□ -0.98
RTTN-217ENST00000640393 CST3P01034 146 aaPredicted RBP8.91□□□□□ -0.98
RTTN-217ENST00000640393 YARSP54577 528 aaKnown RBP8.91□□□□□ -0.98
RTTN-217ENST00000640393 TMEM201Q5SNT2 666 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 OGFOD3Q6PK18 319 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 MRPL41Q8IXM3 137 aaKnown RBP8.91□□□□□ -0.98
RTTN-217ENST00000640393 RASGRP4Q8TDF6 673 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 GATA6Q92908 595 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 PSMG3-AS1Q96PY0 264 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 CRBNQ96SW2 442 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 DUSP23Q9BVJ7 150 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 LRRC4CQ9HCJ2 640 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 MRVI1Q9Y6F6 885 aa8.91□□□□□ -0.98
RTTN-217ENST00000640393 K7ELQ4 463 aaPredicted RBP8.9□□□□□ -0.98
RTTN-217ENST00000640393 ATE1O95260 518 aa8.9□□□□□ -0.98
RTTN-217ENST00000640393 ATF4P18848 351 aaPredicted RBP8.9□□□□□ -0.98
RTTN-217ENST00000640393 SPATA32Q96LK8 384 aa8.9□□□□□ -0.98
RTTN-217ENST00000640393 KIF2CQ99661 725 aa8.9□□□□□ -0.98
RTTN-217ENST00000640393 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.9□□□□□ -0.98
RTTN-217ENST00000640393 TPX2Q9ULW0 747 aaKnown RBP8.9□□□□□ -0.98
RTTN-217ENST00000640393 GSC2O15499 205 aa8.89□□□□□ -0.99
RTTN-217ENST00000640393 SLITRK5O94991 958 aa8.89□□□□□ -0.99
RTTN-217ENST00000640393 ARID5AQ03989 594 aa8.89□□□□□ -0.99
RTTN-217ENST00000640393 OVOS1Q6IE37 1185 aa8.89□□□□□ -0.99
RTTN-217ENST00000640393 RUFY4Q6ZNE9 571 aa8.89□□□□□ -0.99
RTTN-217ENST00000640393 MFSD2AQ8NA29 543 aa8.89□□□□□ -0.99
RTTN-217ENST00000640393 BAHD1Q8TBE0 780 aaPredicted RBP8.89□□□□□ -0.99
RTTN-217ENST00000640393 SSBP05455 408 aaKnown RBP eCLIP8.88□□□□□ -0.99
RTTN-217ENST00000640393 RAG1P15918 1043 aa8.88□□□□□ -0.99
RTTN-217ENST00000640393 GBP1P32455 592 aa8.88□□□□□ -0.99
RTTN-217ENST00000640393 CYP27C1Q4G0S4 372 aa8.88□□□□□ -0.99
RTTN-217ENST00000640393 LETMD1Q6P1Q0 360 aa8.88□□□□□ -0.99
RTTN-217ENST00000640393 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
RTTN-217ENST00000640393 ATG4CQ96DT6 458 aa8.88□□□□□ -0.99
RTTN-217ENST00000640393 SEC16BQ96JE7 1060 aa8.88□□□□□ -0.99
RTTN-217ENST00000640393 SRRTQ9BXP5 876 aaKnown RBP8.88□□□□□ -0.99
RTTN-217ENST00000640393 GMIPQ9P107 970 aa8.88□□□□□ -0.99
RTTN-217ENST00000640393 POLR2BP30876 1174 aaKnown RBP8.87□□□□□ -0.99
RTTN-217ENST00000640393 SOX9P48436 509 aa8.87□□□□□ -0.99
RTTN-217ENST00000640393 EIF6P56537 245 aaKnown RBP8.87□□□□□ -0.99
RTTN-217ENST00000640393 COL9A2Q14055 689 aaPredicted RBP8.87□□□□□ -0.99
RTTN-217ENST00000640393 ARHGAP27Q6ZUM4 889 aa8.87□□□□□ -0.99
RTTN-217ENST00000640393 ZNRF3Q9ULT6 936 aa8.87□□□□□ -0.99
RTTN-217ENST00000640393 LEMD3Q9Y2U8 911 aa8.87□□□□□ -0.99
RTTN-217ENST00000640393 CNTNAP4Q9C0A0 1308 aa8.87□□□□□ -0.99
RTTN-217ENST00000640393 TGFB1P01137 390 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 CAP2P40123 477 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 CHMP4BP1P59074 171 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 CYP27A1Q02318 531 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 ZDHHC13Q8IUH4 622 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 CCDC74BQ96LY2 380 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 PPP1R1BQ9UD71 204 aaPredicted RBP8.86□□□□□ -0.99
RTTN-217ENST00000640393 CBX7O95931 251 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 EOMESO95936 686 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 ITGB7P26010 798 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 RANGAP1P46060 587 aaPredicted RBP8.86□□□□□ -0.99
RTTN-217ENST00000640393 PPP2R5EQ16537 467 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 LRRFIP1Q32MZ4 808 aaKnown RBP8.86□□□□□ -0.99
RTTN-217ENST00000640393 NLRC3Q7RTR2 1065 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 FAM181AQ8N9Y4 354 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 TMEM40Q8WWA1 233 aa8.86□□□□□ -0.99
RTTN-217ENST00000640393 CYP26A1O43174 497 aa8.85□□□□□ -0.99
RTTN-217ENST00000640393 IMPDH2P12268 514 aa8.85□□□□□ -0.99
RTTN-217ENST00000640393 SLFN12Q8IYM2 578 aa8.85□□□□□ -0.99
RTTN-217ENST00000640393 CEP131Q9UPN4 1083 aa8.85□□□□□ -0.99
RTTN-217ENST00000640393 PRR19A6NJB7 356 aa8.84□□□□□ -0.99
RTTN-217ENST00000640393 NME1P15531 152 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms