RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
RTTN-217ENST00000640393 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
RTTN-217ENST00000640393 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
RTTN-217ENST00000640393 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
RTTN-217ENST00000640393 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
RTTN-217ENST00000640393 FOXD1Q16676 465 aa22.23■■□□□ 1.15
RTTN-217ENST00000640393 ADRA2BP18089 450 aa21.61■■□□□ 1.05
RTTN-217ENST00000640393 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
RTTN-217ENST00000640393 PIAS4Q8N2W9 510 aaPredicted RBP21.03■□□□□ 0.96
RTTN-217ENST00000640393 MSH5O43196 834 aa20.33■□□□□ 0.84
RTTN-217ENST00000640393 PPP4R3CPQ6ZMV5 832 aa20.02■□□□□ 0.8
RTTN-217ENST00000640393 KCNA4P22459 653 aa19.81■□□□□ 0.76
RTTN-217ENST00000640393 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
RTTN-217ENST00000640393 MAPK8IP2Q13387 824 aaPredicted RBP19.58■□□□□ 0.73
RTTN-217ENST00000640393 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
RTTN-217ENST00000640393 CNKSR2Q8WXI2 1034 aa19.36■□□□□ 0.69
RTTN-217ENST00000640393 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
RTTN-217ENST00000640393 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
RTTN-217ENST00000640393 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
RTTN-217ENST00000640393 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
RTTN-217ENST00000640393 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
RTTN-217ENST00000640393 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
RTTN-217ENST00000640393 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
RTTN-217ENST00000640393 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
RTTN-217ENST00000640393 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
RTTN-217ENST00000640393 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
RTTN-217ENST00000640393 ZBTB22O15209 634 aa18.2■□□□□ 0.5
RTTN-217ENST00000640393 SLC4A2P04920 1241 aa18.12■□□□□ 0.49
RTTN-217ENST00000640393 FOXD4L1Q9NU39 408 aa18.1■□□□□ 0.49
RTTN-217ENST00000640393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
RTTN-217ENST00000640393 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
RTTN-217ENST00000640393 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
RTTN-217ENST00000640393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
RTTN-217ENST00000640393 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
RTTN-217ENST00000640393 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
RTTN-217ENST00000640393 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
RTTN-217ENST00000640393 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
RTTN-217ENST00000640393 ATF5Q9Y2D1 282 aaPredicted RBP17.36■□□□□ 0.37
RTTN-217ENST00000640393 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
RTTN-217ENST00000640393 APLP2Q06481 763 aa17.22■□□□□ 0.35
RTTN-217ENST00000640393 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
RTTN-217ENST00000640393 CAPN15O75808 1086 aa17.15■□□□□ 0.34
RTTN-217ENST00000640393 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
RTTN-217ENST00000640393 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
RTTN-217ENST00000640393 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
RTTN-217ENST00000640393 ABCB7O75027 752 aa16.88■□□□□ 0.29
RTTN-217ENST00000640393 POLA2Q14181 598 aa16.87■□□□□ 0.29
RTTN-217ENST00000640393 DSG3P32926 999 aa16.72■□□□□ 0.27
RTTN-217ENST00000640393 FKBP8Q14318 412 aa16.57■□□□□ 0.24
RTTN-217ENST00000640393 FBLN2P98095 1184 aa16.56■□□□□ 0.24
RTTN-217ENST00000640393 MKRN4PQ13434 485 aaPredicted RBP16.55■□□□□ 0.24
RTTN-217ENST00000640393 ZBTB12Q9Y330 459 aaPredicted RBP16.44■□□□□ 0.22
RTTN-217ENST00000640393 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
RTTN-217ENST00000640393 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
RTTN-217ENST00000640393 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
RTTN-217ENST00000640393 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
RTTN-217ENST00000640393 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
RTTN-217ENST00000640393 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
RTTN-217ENST00000640393 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
RTTN-217ENST00000640393 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
RTTN-217ENST00000640393 PROM2Q8N271 834 aa15.89■□□□□ 0.13
RTTN-217ENST00000640393 RBM42Q9BTD8 480 aaKnown RBP15.87■□□□□ 0.13
RTTN-217ENST00000640393 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
RTTN-217ENST00000640393 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
RTTN-217ENST00000640393 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
RTTN-217ENST00000640393 CLEC11AQ9Y240 323 aa15.64■□□□□ 0.09
RTTN-217ENST00000640393 VASPP50552 380 aaPredicted RBP15.62■□□□□ 0.09
RTTN-217ENST00000640393 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
RTTN-217ENST00000640393 SPDYE1Q8NFV5 336 aaPredicted RBP15.56■□□□□ 0.08
RTTN-217ENST00000640393 MIER1Q8N108 512 aa15.52■□□□□ 0.08
RTTN-217ENST00000640393 PLCD3Q8N3E9 789 aa15.5■□□□□ 0.07
RTTN-217ENST00000640393 IFNLR1Q8IU57 520 aaPredicted RBP15.47■□□□□ 0.07
RTTN-217ENST00000640393 PITPNM1O00562 1244 aa15.46■□□□□ 0.07
RTTN-217ENST00000640393 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
RTTN-217ENST00000640393 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
RTTN-217ENST00000640393 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
RTTN-217ENST00000640393 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
RTTN-217ENST00000640393 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
RTTN-217ENST00000640393 CREBZFQ9NS37 354 aa15.24■□□□□ 0.03
RTTN-217ENST00000640393 CHADLQ6NUI6 762 aa15.23■□□□□ 0.03
RTTN-217ENST00000640393 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
RTTN-217ENST00000640393 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
RTTN-217ENST00000640393 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
RTTN-217ENST00000640393 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
RTTN-217ENST00000640393 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 0
RTTN-217ENST00000640393 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
RTTN-217ENST00000640393 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
RTTN-217ENST00000640393 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
RTTN-217ENST00000640393 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
RTTN-217ENST00000640393 FARP1Q9Y4F1 1045 aaPredicted RBP15□□□□□ -0.01
RTTN-217ENST00000640393 PKD2Q13563 968 aa14.99□□□□□ -0.01
RTTN-217ENST00000640393 DCAF8Q5TAQ9 597 aa14.99□□□□□ -0.01
RTTN-217ENST00000640393 NUBP1P53384 320 aa14.98□□□□□ -0.01
RTTN-217ENST00000640393 ECM2O94769 699 aaPredicted RBP14.93□□□□□ -0.02
RTTN-217ENST00000640393 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
RTTN-217ENST00000640393 DCAF8L2P0C7V8 631 aa14.92□□□□□ -0.02
RTTN-217ENST00000640393 FAM212AQ96EL1 285 aa14.88□□□□□ -0.03
RTTN-217ENST00000640393 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
RTTN-217ENST00000640393 GSE1Q14687 1217 aa14.87□□□□□ -0.03
RTTN-217ENST00000640393 RGL2O15211 777 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms