RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 HLTFQ14527 1009 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCN1B-208ENST00000640135 SPECC1Q5M775 1068 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 GPATCH4Q5T3I0 446 aaKnown RBP12.37□□□□□ -0.43
SCN1B-208ENST00000640135 TAF3Q5VWG9 929 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 ARMC9Q7Z3E5 817 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 ZNF654Q8IZM8 581 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 ZSCAN10Q96SZ4 725 aaPredicted RBP12.37□□□□□ -0.43
SCN1B-208ENST00000640135 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 TRAF5O00463 557 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 DDAH1O94760 285 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 DNA2P51530 1060 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 KIF5AQ12840 1032 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 GRAPQ13588 217 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 GRAPLQ8TC17 118 aaPredicted RBP12.37□□□□□ -0.43
SCN1B-208ENST00000640135 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 STX10O60499 249 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 TXKP42681 527 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 BIRC3Q13489 604 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 CALCRLQ16602 461 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 RASAL2Q9UJF2 1139 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 IKBKGQ9Y6K9 419 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 OTUD7AQ8TE49 926 aaPredicted RBP12.37□□□□□ -0.43
SCN1B-208ENST00000640135 SNX29Q8TEQ0 813 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 PKD2L1Q9P0L9 805 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 ARHGEF40Q8TER5 1519 aa12.37□□□□□ -0.43
SCN1B-208ENST00000640135 ATP2A1O14983 1001 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 TRPC3Q13507 836 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 ABCB5Q2M3G0 1257 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 COA1Q9GZY4 146 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 TCP10L2B9ZVM9 353 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 CHMP2AO43633 222 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 LPXNO60711 386 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 SMC1AQ14683 1233 aaKnown RBP12.36□□□□□ -0.43
SCN1B-208ENST00000640135 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 LUC7L2Q9Y383 392 aaKnown RBP12.36□□□□□ -0.43
SCN1B-208ENST00000640135 PDE4DQ08499 809 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 NCAPH2Q6IBW4 605 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 KCNH3Q9ULD8 1083 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 GNG11P61952 73 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 TYRO3Q06418 890 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 KRT40Q6A162 431 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 SREK1Q8WXA9 508 aaKnown RBP12.36□□□□□ -0.43
SCN1B-208ENST00000640135 PIM2Q9P1W9 311 aa12.36□□□□□ -0.43
SCN1B-208ENST00000640135 MYL5Q02045 173 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 TRIM14Q14142 442 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 PNMA1Q8ND90 353 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 OSBPP22059 807 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 SCNN1DP51172 638 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 UBXN1Q04323 297 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 USH1GQ495M9 461 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 CIAPIN1Q6FI81 312 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 FBXO11Q86XK2 927 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 ZNF354CQ86Y25 554 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 MYO3BQ8WXR4 1341 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 SMCO2A6NFE2 343 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 GAS7O60861 476 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 MMP10P09238 476 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 CCDC175P0C221 793 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 ERFEQ4G0M1 354 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 SLFN12Q8IYM2 578 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 GLG1Q92896 1179 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 CCDC77Q9BR77 488 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
SCN1B-208ENST00000640135 STAMBPO95630 424 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 ARHGEF16Q5VV41 709 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 ANKRD35Q8N283 1001 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 MLKLQ8NB16 471 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 PAGR1Q9BTK6 254 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 CCDC113Q9H0I3 377 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 DNAJC25Q9H1X3 360 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 KANSL2Q9H9L4 492 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 BSDC1Q9NW68 430 aaPredicted RBP12.34□□□□□ -0.43
SCN1B-208ENST00000640135 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 DIP2CQ9Y2E4 1556 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
SCN1B-208ENST00000640135 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
SCN1B-208ENST00000640135 TRMT1Q9NXH9 659 aaKnown RBP12.34□□□□□ -0.43
SCN1B-208ENST00000640135 KCTD2Q14681 263 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 FAM47AQ5JRC9 791 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 HOMER2Q9NSB8 354 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 STAP2Q9UGK3 403 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 PLEKHG2Q9H7P9 1386 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 HSPD1P10809 573 aaKnown RBP12.34□□□□□ -0.43
SCN1B-208ENST00000640135 ASPRV1Q53RT3 343 aa12.34□□□□□ -0.43
SCN1B-208ENST00000640135 CEP135Q66GS9 1140 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms