RNA–Protein interactions for RNA: ENST00000638762.1

PAX6-239, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-239ENST00000638762 PPFIA3O75145 1194 aa13.56□□□□□ -0.24
PAX6-239ENST00000638762 PTPN14Q15678 1187 aa13.56□□□□□ -0.24
PAX6-239ENST00000638762 FERMT2Q96AC1 680 aa13.56□□□□□ -0.24
PAX6-239ENST00000638762 TOMM22Q9NS69 142 aa13.56□□□□□ -0.24
PAX6-239ENST00000638762 NARFQ9UHQ1 456 aa13.56□□□□□ -0.24
PAX6-239ENST00000638762 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
PAX6-239ENST00000638762 TNKSO95271 1327 aa13.56□□□□□ -0.24
PAX6-239ENST00000638762 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
PAX6-239ENST00000638762 TRAPPC10P48553 1259 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 CEP135Q66GS9 1140 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 ANKRD7Q92527 254 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 GJB4Q9NTQ9 266 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 AATFQ9NY61 560 aaKnown RBP eCLIP13.55□□□□□ -0.24
PAX6-239ENST00000638762 TACC3Q9Y6A5 838 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 SMC2O95347 1197 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 RXRAP19793 462 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 FANCCQ00597 558 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 MDM2Q00987 491 aaPredicted RBP13.55□□□□□ -0.24
PAX6-239ENST00000638762 RRP12Q5JTH9 1297 aaKnown RBP13.55□□□□□ -0.24
PAX6-239ENST00000638762 IFIT1BQ5T764 474 aaKnown RBP13.55□□□□□ -0.24
PAX6-239ENST00000638762 CCAR2Q8N163 923 aaKnown RBP13.55□□□□□ -0.24
PAX6-239ENST00000638762 ACSBG1Q96GR2 724 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 NLRP3Q96P20 1036 aa13.55□□□□□ -0.24
PAX6-239ENST00000638762 CRNKL1Q9BZJ0 848 aaKnown RBP13.55□□□□□ -0.24
PAX6-239ENST00000638762 XPO4Q9C0E2 1151 aaKnown RBP13.55□□□□□ -0.24
PAX6-239ENST00000638762 ARPP21Q9UBL0 812 aaPredicted RBP13.55□□□□□ -0.24
PAX6-239ENST00000638762 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 KRT2P35908 639 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 SARSP49591 514 aaKnown RBP13.54□□□□□ -0.24
PAX6-239ENST00000638762 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
PAX6-239ENST00000638762 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 STK11IPQ8N1F8 1099 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 PDCL2Q8N4E4 241 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 NKX2-3Q8TAU0 364 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 FAM84BQ96KN1 310 aaPredicted RBP13.54□□□□□ -0.24
PAX6-239ENST00000638762 IFNKQ9P0W0 207 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 RPS6KA4O75676 772 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 TOB1P50616 345 aaPredicted RBP13.54□□□□□ -0.24
PAX6-239ENST00000638762 POSTNQ15063 836 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 FILIP1Q7Z7B0 1213 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 ENOX1Q8TC92 643 aaKnown RBP13.54□□□□□ -0.24
PAX6-239ENST00000638762 PHF20Q9BVI0 1012 aa13.54□□□□□ -0.24
PAX6-239ENST00000638762 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
PAX6-239ENST00000638762 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 ERCC5P28715 1186 aaPredicted RBP13.53□□□□□ -0.24
PAX6-239ENST00000638762 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
PAX6-239ENST00000638762 RPS8P62241 208 aaKnown RBP13.53□□□□□ -0.24
PAX6-239ENST00000638762 SEMA3FQ13275 785 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
PAX6-239ENST00000638762 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 KIF18AQ8NI77 898 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 MYL10Q9BUA6 226 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 ABCF2Q9UG63 623 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
PAX6-239ENST00000638762 VPS72Q15906 364 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 SPATA20Q8TB22 786 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 SMARCE1Q969G3 411 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
PAX6-239ENST00000638762 C16orf45Q96MC5 204 aaPredicted RBP13.53□□□□□ -0.24
PAX6-239ENST00000638762 USP21Q9UK80 565 aa13.53□□□□□ -0.24
PAX6-239ENST00000638762 MINDY4BA8MYZ0 360 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 BRD2P25440 801 aaKnown RBP13.52□□□□□ -0.24
PAX6-239ENST00000638762 UBASH3AP57075 661 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 PDE4BQ07343 736 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 FUT2Q10981 343 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 LONRF3Q496Y0 759 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 TPTE2Q6XPS3 522 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 ENAHQ8N8S7 591 aaPredicted RBP13.52□□□□□ -0.24
PAX6-239ENST00000638762 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 SETDB2Q96T68 719 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 AFF2P51816 1311 aa13.52□□□□□ -0.24
PAX6-239ENST00000638762 COL1A1P02452 1464 aaPredicted RBP13.52□□□□□ -0.25
PAX6-239ENST00000638762 NHSQ6T4R5 1651 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 GOLGA6L9A6NEM1 432 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 HIBADHP31937 336 aaKnown RBP13.52□□□□□ -0.25
PAX6-239ENST00000638762 GYG1P46976 350 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 TMC6Q7Z403 805 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 NUP133Q8WUM0 1156 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 INCENPQ9NQS7 918 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 PRDM10Q9NQV6 1147 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 SH3GLB2Q9NR46 395 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 PCDHA5Q9Y5H7 936 aa13.52□□□□□ -0.25
PAX6-239ENST00000638762 KIF5BP33176 963 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 TROAPQ12815 778 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 MORC3Q14149 939 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 CTR9Q6PD62 1173 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 TMTC3Q6ZXV5 915 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 VSTM4Q8IW00 320 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 CTCFLQ8NI51 663 aaPredicted RBP13.51□□□□□ -0.25
PAX6-239ENST00000638762 ANKS1AQ92625 1134 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 PRDM4Q9UKN5 801 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 UTRNP46939 3433 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 MYH2Q9UKX2 1941 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 SNAP23O00161 211 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 SERPINC1P01008 464 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 GUCY1A2P33402 732 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 PNOCQ13519 176 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 ADGRA1Q86SQ6 560 aa13.51□□□□□ -0.25
PAX6-239ENST00000638762 CLIC6Q96NY7 704 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms