RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CUTAO60888 179 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 LDHBP07195 334 aaKnown RBP24.8■■□□□ 1.56
CLN6-224ENST00000638076 GYS1P13807 737 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 TROAPQ12815 778 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 SBK1Q52WX2 424 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 SARM1Q6SZW1 724 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 TIGD1Q96MW7 591 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 R3HCC1Q9Y3T6 440 aaKnown RBP24.8■■□□□ 1.56
CLN6-224ENST00000638076 EP400Q96L91 3159 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 PTGS1P23219 599 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 NOLC1Q14978 699 aaKnown RBP eCLIP24.8■■□□□ 1.56
CLN6-224ENST00000638076 FAM47AQ5JRC9 791 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 RESP18Q5W5W9 173 aa24.8■■□□□ 1.56
CLN6-224ENST00000638076 GPR101Q96P66 508 aaPredicted RBP24.8■■□□□ 1.56
CLN6-224ENST00000638076 RBM28Q9NW13 759 aaKnown RBP24.8■■□□□ 1.56
CLN6-224ENST00000638076 NMT2O60551 498 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 PLEKHA8P1O95397 391 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 CALM1P0DP23 149 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 CALM2P0DP24 149 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 CALM3P0DP25 149 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 FUT2Q10981 343 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 RILPL1Q5EBL4 403 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 ZNF804AQ7Z570 1209 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 C17orf53Q8N3J3 647 aaPredicted RBP24.79■■□□□ 1.56
CLN6-224ENST00000638076 AOPEPQ8N6M6 819 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 OXER1Q8TDS5 423 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 PKN1Q16512 942 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 DPCR1Q3MIW9 517 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 CCDC186Q7Z3E2 898 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 MCM9Q9NXL9 1143 aa24.79■■□□□ 1.56
CLN6-224ENST00000638076 FAM237AA0A1B0GTK4 181 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 DDAH1O94760 285 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 PDE4BQ07343 736 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 SLC4A8Q2Y0W8 1093 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 KRI1Q8N9T8 703 aaKnown RBP24.78■■□□□ 1.56
CLN6-224ENST00000638076 CLIP2Q9UDT6 1046 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 NRBP1Q9UHY1 535 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 BIN1O00499 593 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 PRPF3O43395 683 aaKnown RBP24.78■■□□□ 1.56
CLN6-224ENST00000638076 SERPINB2P05120 415 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 USP17L8P0C7I0 530 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 XBP1P17861 261 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 CERKQ8TCT0 537 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 SHISA4Q96DD7 197 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 VPS54Q9P1Q0 977 aa24.78■■□□□ 1.56
CLN6-224ENST00000638076 LAMB1P07942 1786 aa24.77■■□□□ 1.56
CLN6-224ENST00000638076 hCG_1642624A0A1W2PR95 340 aa24.77■■□□□ 1.56
CLN6-224ENST00000638076 RBM6P78332 1123 aaKnown RBP24.77■■□□□ 1.56
CLN6-224ENST00000638076 ST5P78524 1137 aa24.77■■□□□ 1.56
CLN6-224ENST00000638076 GPSM2P81274 684 aa24.77■■□□□ 1.56
CLN6-224ENST00000638076 PYCARDQ9ULZ3 195 aa24.77■■□□□ 1.56
CLN6-224ENST00000638076 V9GY48 417 aaPredicted RBP24.77■■□□□ 1.56
CLN6-224ENST00000638076 DLEC1Q9Y238 1755 aa24.77■■□□□ 1.56
CLN6-224ENST00000638076 CRY2Q49AN0 593 aa24.77■■□□□ 1.56
CLN6-224ENST00000638076 UBR3Q6ZT12 1888 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 CDC25BP30305 580 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 USP5P45974 858 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 NLRP12P59046 1061 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 DIXDC1Q155Q3 683 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 GRIK5Q16478 980 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 KIAA1524Q8TCG1 905 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 PCDHB6Q9Y5E3 794 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 KIAA1551Q9HCM1 1747 aa24.76■■□□□ 1.55
CLN6-224ENST00000638076 TSPY2A6NKD2 308 aa24.75■■□□□ 1.55
CLN6-224ENST00000638076 C15orf52Q6ZUT6 534 aaKnown RBP24.75■■□□□ 1.55
CLN6-224ENST00000638076 QTRT2Q9H974 415 aaKnown RBP24.75■■□□□ 1.55
CLN6-224ENST00000638076 CABP5Q9NP86 173 aa24.75■■□□□ 1.55
CLN6-224ENST00000638076 MKRN1Q9UHC7 482 aaKnown RBP24.75■■□□□ 1.55
CLN6-224ENST00000638076 TMTC3Q6ZXV5 915 aa24.75■■□□□ 1.55
CLN6-224ENST00000638076 SH3RF3Q8TEJ3 882 aaPredicted RBP24.75■■□□□ 1.55
CLN6-224ENST00000638076 MRFAP1L1Q96HT8 127 aa24.75■■□□□ 1.55
CLN6-224ENST00000638076 BPIFA3Q9BQP9 254 aa24.75■■□□□ 1.55
CLN6-224ENST00000638076 KCNH3Q9ULD8 1083 aa24.75■■□□□ 1.55
CLN6-224ENST00000638076 MYH6P13533 1939 aa24.75■■□□□ 1.55
CLN6-224ENST00000638076 IGSF3O75054 1194 aa24.74■■□□□ 1.55
CLN6-224ENST00000638076 UFL1O94874 794 aa24.74■■□□□ 1.55
CLN6-224ENST00000638076 GSTO1P78417 241 aa24.74■■□□□ 1.55
CLN6-224ENST00000638076 SPECC1Q5M775 1068 aa24.74■■□□□ 1.55
CLN6-224ENST00000638076 PHF20Q9BVI0 1012 aa24.74■■□□□ 1.55
CLN6-224ENST00000638076 SPTLC3Q9NUV7 552 aa24.74■■□□□ 1.55
CLN6-224ENST00000638076 SLC27A3Q5K4L6 730 aa24.74■■□□□ 1.55
CLN6-224ENST00000638076 DNTTIP2Q5QJE6 756 aaKnown RBP24.74■■□□□ 1.55
CLN6-224ENST00000638076 CTCFLQ8NI51 663 aaPredicted RBP24.74■■□□□ 1.55
CLN6-224ENST00000638076 RBM17Q96I25 401 aaKnown RBP24.74■■□□□ 1.55
CLN6-224ENST00000638076 FBXO2Q9UK22 296 aaPredicted RBP24.74■■□□□ 1.55
CLN6-224ENST00000638076 ATP2B1P20020 1258 aa24.73■■□□□ 1.55
CLN6-224ENST00000638076 TERF1P54274 439 aa24.73■■□□□ 1.55
CLN6-224ENST00000638076 C12orf60Q5U649 245 aa24.73■■□□□ 1.55
CLN6-224ENST00000638076 BAG3O95817 575 aa24.73■■□□□ 1.55
CLN6-224ENST00000638076 PTPREP23469 700 aa24.73■■□□□ 1.55
CLN6-224ENST00000638076 GRIN1Q05586 938 aa24.73■■□□□ 1.55
CLN6-224ENST00000638076 TUBE1Q9UJT0 475 aa24.73■■□□□ 1.55
CLN6-224ENST00000638076 CNTNAP5Q8WYK1 1306 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 TPM2P07951 284 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 KRT2P35908 639 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 LONRF3Q496Y0 759 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 SRBD1Q8N5C6 995 aaKnown RBP24.72■■□□□ 1.55
CLN6-224ENST00000638076 CD209Q9NNX6 404 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 ATP2B4P23634 1241 aa24.72■■□□□ 1.55
CLN6-224ENST00000638076 PNOCQ13519 176 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms