RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 WASLO00401 505 aaPredicted RBP19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 LPXNO60711 386 aa19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 ARHGEF35A5YM69 484 aa19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 TRIM56Q9BRZ2 755 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 ARAP1Q96P48 1450 aa19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 RNF113AO15541 343 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 BBOF1Q8ND07 529 aa19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 HELBQ8NG08 1087 aaPredicted RBP19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 NLRP7Q8WX94 980 aa19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 HELLSQ9NRZ9 838 aa19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 EIF3DO15371 548 aaKnown RBP eCLIP19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 NONOQ15233 471 aaKnown RBP eCLIP19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 DIXDC1Q155Q3 683 aa19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 CCDC68Q9H2F9 335 aa19.91■□□□□ 0.78
CACNA1A-247ENST00000637769 GSTA1P08263 222 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 GSTA2P09210 222 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 NECAB1Q8N987 351 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 PPP1R9AQ9ULJ8 1098 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 IRX5P78411 483 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 TRIM42Q8IWZ5 723 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 EFHD1Q9BUP0 239 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 KRT71Q3SY84 523 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 LARP6Q9BRS8 491 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 FAF1Q9UNN5 650 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 EIF4G3O43432 1585 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 N4BP1O75113 896 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 ANKRD20A4Q4UJ75 823 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 ANKRD20A8PQ5CZ79 823 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 ANKRD20A2Q5SQ80 823 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 ANKRD20A1Q5TYW2 823 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 THUMPD2Q9BTF0 503 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 TRIM4Q9C037 500 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 LMNB2Q03252 620 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 PROCA1Q8NCQ7 364 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 MICAL1Q8TDZ2 1067 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 NT5C3AQ9H0P0 336 aa19.9■□□□□ 0.78
CACNA1A-247ENST00000637769 SPECC1L-ADORA2AF8WAN1 911 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 H0YCG3 227 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 TPTE2Q6XPS3 522 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 MAGEB6Q8N7X4 407 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 IFIH1Q9BYX4 1025 aaKnown RBP19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 ARHGAP42A6NI28 874 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 CDR2Q01850 454 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 PICALMQ13492 652 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 CADPS2Q86UW7 1296 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 ABCC5O15440 1437 aa19.89■□□□□ 0.78
CACNA1A-247ENST00000637769 MAP3K1Q13233 1512 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 CUTAO60888 179 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 SFMBT2Q5VUG0 894 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 SMC5Q8IY18 1101 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 AMFRQ9UKV5 643 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 DDX41Q9UJV9 622 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 RNF8O76064 485 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 CCDC169A6NNP5 214 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 GOLGA8KD6RF30 607 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 XRCC6P12956 609 aaKnown RBP eCLIP19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 POLR2BP30876 1174 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 PPP2R5DQ14738 602 aa19.89■□□□□ 0.77
CACNA1A-247ENST00000637769 PALM2Q8IXS6 379 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 ANKRD44Q8N8A2 993 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 LRGUKQ96M69 825 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 SPZ1Q9BXG8 430 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 NR1I2O75469 434 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 PDE4DQ08499 809 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 PHF8Q9UPP1 1060 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 AMOTL2Q9Y2J4 779 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 DNM3Q9UQ16 869 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 STAG1Q8WVM7 1258 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 DDX21Q9NR30 783 aaKnown RBP eCLIP19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 KCNH3Q9ULD8 1083 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 CCPG1Q9ULG6 757 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 A0A1B0GVL5 298 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 GCKP35557 465 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 CTTNBP2NLQ9P2B4 639 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 PTPDC1A2A3K4 754 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 GARSP41250 739 aaKnown RBP19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 CREB3L3Q68CJ9 461 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 KSR2Q6VAB6 950 aa19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.77
CACNA1A-247ENST00000637769 AP1ARQ63HQ0 302 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 F8W8V4 182 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 RLBP1P12271 317 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 APBA1Q02410 837 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 MBIPQ9NS73 344 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 LRRD1A4D1F6 860 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 MMEL1Q495T6 779 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 CXorf38Q8TB03 319 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 CDKL2Q92772 493 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 AKNAD1Q5T1N1 836 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 MRPL44Q9H9J2 332 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 AZI2Q9H6S1 392 aa19.87■□□□□ 0.77
CACNA1A-247ENST00000637769 STX17P56962 302 aa19.86■□□□□ 0.77
CACNA1A-247ENST00000637769 PNMA2Q9UL42 364 aa19.86■□□□□ 0.77
CACNA1A-247ENST00000637769 DENND2AQ9ULE3 1009 aa19.86■□□□□ 0.77
CACNA1A-247ENST00000637769 ATP5J2-PTCD1G3V325 749 aa19.86■□□□□ 0.77
CACNA1A-247ENST00000637769 JADE1Q6IE81 842 aa19.86■□□□□ 0.77
CACNA1A-247ENST00000637769 OTUD6AQ7L8S5 288 aa19.86■□□□□ 0.77
CACNA1A-247ENST00000637769 ZBTB21Q9ULJ3 1066 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms