RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 SMARCE1Q969G3 411 aa18.4■□□□□ 0.54
CHRNA7-221ENST00000636898 DUOX1Q9NRD9 1551 aa18.39■□□□□ 0.54
CHRNA7-221ENST00000636898 FOXN1O15353 648 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 ZNF18P17022 549 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 AKAP17AQ02040 695 aaKnown RBP18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 UBE4AQ14139 1066 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 DDB1Q16531 1140 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 CCDC93Q567U6 631 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 SPECC1Q5M775 1068 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 CCDC34Q96HJ3 373 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 RIOK1Q9BRS2 568 aaKnown RBP18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 BRIP1Q9BX63 1249 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 PHLPP2Q6ZVD8 1323 aa18.39■□□□□ 0.53
CHRNA7-221ENST00000636898 ACTN4O43707 911 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 ETF1P62495 437 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 ITPK1Q13572 414 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 CLEC4GQ6UXB4 293 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 SYT10Q6XYQ8 523 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 CCDC82Q8N4S0 544 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 SDR42E1Q8WUS8 393 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 SERTAD1Q9UHV2 236 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 DDX41Q9UJV9 622 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 AHDC1Q5TGY3 1603 aaPredicted RBP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 DLEC1Q9Y238 1755 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 BMP15O95972 392 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 FGRP09769 529 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 TBX2Q13207 712 aaPredicted RBP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 CMTR1Q8N1G2 835 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 OXER1Q8TDS5 423 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 ZSCAN10Q96SZ4 725 aaPredicted RBP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 CABP5Q9NP86 173 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 INTS13Q9NVM9 706 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 RAI14Q9P0K7 980 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 ABCF2Q9UG63 623 aa18.38■□□□□ 0.53
CHRNA7-221ENST00000636898 SPDYE4A6NLX3 237 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 ARHGAP6O43182 974 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 PRPF3O43395 683 aaKnown RBP18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 DMTNQ08495 405 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 FUT2Q10981 343 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 ENAHQ8N8S7 591 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 PHF20Q9BVI0 1012 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 SPATA31A1Q5TZJ5 1347 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 COL1A1P02452 1464 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 TRIM75PA6NK02 468 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 CALM1P0DP23 149 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 CALM2P0DP24 149 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 CALM3P0DP25 149 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 ERCC5P28715 1186 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 SF3B3Q15393 1217 aaKnown RBP18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 CATIPQ7Z7H3 387 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 NUTM2AQ8IVF1 878 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 GTPBP4Q9BZE4 634 aaKnown RBP18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 BSDC1Q9NW68 430 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 NFE2L3Q9Y4A8 694 aa18.37■□□□□ 0.53
CHRNA7-221ENST00000636898 MYH2Q9UKX2 1941 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 SCN7AQ01118 1682 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 ZSCAN12O43309 604 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 KRT2P35908 639 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 PKN1Q16512 942 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 HOMER1Q86YM7 354 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 CSRNP2Q9H175 543 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 COL4A1P02462 1669 aa18.36■□□□□ 0.53
CHRNA7-221ENST00000636898 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 FMR1Q06787 632 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 CAVIN4Q5BKX8 364 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 IFIT1BQ5T764 474 aaKnown RBP18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 IQCA1Q86XH1 822 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 TMEM139Q8IV31 216 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 FERMT2Q96AC1 680 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 NRAPQ86VF7 1730 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 ROBO1Q9Y6N7 1651 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 GYG1P46976 350 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 PLCD1P51178 756 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 ELF2Q15723 593 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 KMT5BQ4FZB7 885 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 SPECC1LQ69YQ0 1117 aa18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
CHRNA7-221ENST00000636898 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 GOLGA6L9A6NEM1 432 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 SEMA3EO15041 775 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 STX10O60499 249 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 DDAH1O94760 285 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 TROAPQ12815 778 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 TRIM65Q6PJ69 517 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 REXO1L1PQ8IX06 675 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 SHISA4Q96DD7 197 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 BRMS1Q9HCU9 246 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 BAZ2AQ9UIF9 1905 aaKnown RBP18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 RGL2O15211 777 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 SLFN14P0C7P3 912 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 CDK11BP21127 795 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms