RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 EPB41L2O43491 1005 aaKnown RBP18.98■□□□□ 0.63
CLN6-216ENST00000636876 ORC4O43929 436 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 PRDM1O75626 825 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 GDF11O95390 407 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 FGRP09769 529 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 PCP11498 1178 aaKnown RBP18.98■□□□□ 0.63
CLN6-216ENST00000636876 RASA1P20936 1047 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 NECTIN1Q15223 517 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 AKNAD1Q5T1N1 836 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 SCYL3Q8IZE3 742 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 STAG1Q8WVM7 1258 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 HHIPL1Q96JK4 782 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 CCDC17Q96LX7 622 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 DOCK1Q14185 1865 aa18.98■□□□□ 0.63
CLN6-216ENST00000636876 SLC27A2O14975 620 aa18.97■□□□□ 0.63
CLN6-216ENST00000636876 JAG1P78504 1218 aa18.97■□□□□ 0.63
CLN6-216ENST00000636876 SHROOM1Q2M3G4 852 aaPredicted RBP18.97■□□□□ 0.63
CLN6-216ENST00000636876 CREB3L3Q68CJ9 461 aa18.97■□□□□ 0.63
CLN6-216ENST00000636876 TNS4Q8IZW8 715 aa18.97■□□□□ 0.63
CLN6-216ENST00000636876 SLC10A4Q96EP9 437 aa18.97■□□□□ 0.63
CLN6-216ENST00000636876 RNF41Q9H4P4 317 aaPredicted RBP18.97■□□□□ 0.63
CLN6-216ENST00000636876 ELP3Q9H9T3 547 aa18.97■□□□□ 0.63
CLN6-216ENST00000636876 INCENPQ9NQS7 918 aa18.97■□□□□ 0.63
CLN6-216ENST00000636876 GINM1Q9NU53 330 aa18.97■□□□□ 0.63
CLN6-216ENST00000636876 ATAD5Q96QE3 1844 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 CAPN15O75808 1086 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 GH2P01242 217 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 ASNSP08243 561 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 AKR1B1P15121 316 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 ABCB5Q2M3G0 1257 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 RGMBQ6NW40 437 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 MFSD6Q6ZSS7 791 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 ZNF444Q8N0Y2 327 aaPredicted RBP18.96■□□□□ 0.63
CLN6-216ENST00000636876 USP26Q9BXU7 913 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 PICK1Q9NRD5 415 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.96■□□□□ 0.63
CLN6-216ENST00000636876 ZBTB21Q9ULJ3 1066 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 TAF6LQ9Y6J9 622 aa18.96■□□□□ 0.63
CLN6-216ENST00000636876 RASSF10A6NK89 507 aa18.95■□□□□ 0.62
CLN6-216ENST00000636876 SEC24BO95487 1268 aa18.95■□□□□ 0.62
CLN6-216ENST00000636876 ZNF157P51786 506 aaPredicted RBP18.95■□□□□ 0.62
CLN6-216ENST00000636876 RNF20Q5VTR2 975 aa18.95■□□□□ 0.62
CLN6-216ENST00000636876 CABP5Q9NP86 173 aa18.95■□□□□ 0.62
CLN6-216ENST00000636876 TOMM22Q9NS69 142 aa18.95■□□□□ 0.62
CLN6-216ENST00000636876 NEDD4P46934 1319 aa18.95■□□□□ 0.62
CLN6-216ENST00000636876 SPDYE5A6NIY4 337 aa18.94■□□□□ 0.62
CLN6-216ENST00000636876 MPHOSPH10O00566 681 aaKnown RBP18.94■□□□□ 0.62
CLN6-216ENST00000636876 PTPRAP18433 802 aa18.94■□□□□ 0.62
CLN6-216ENST00000636876 HSPA4P34932 840 aa18.94■□□□□ 0.62
CLN6-216ENST00000636876 RRP12Q5JTH9 1297 aaKnown RBP18.94■□□□□ 0.62
CLN6-216ENST00000636876 TMEM179Q6ZVK1 233 aa18.94■□□□□ 0.62
CLN6-216ENST00000636876 ERO1BQ86YB8 467 aa18.94■□□□□ 0.62
CLN6-216ENST00000636876 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.94■□□□□ 0.62
CLN6-216ENST00000636876 E7EWF7 191 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 RANBP6O60518 1105 aaKnown RBP18.93■□□□□ 0.62
CLN6-216ENST00000636876 GUCY1A2P33402 732 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 NT5C2P49902 561 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 DEFB115Q30KQ5 88 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 STOX1Q6ZVD7 989 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 RASAL3Q86YV0 1011 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 KCNB2Q92953 911 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 OPTNQ96CV9 577 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 WNK4Q96J92 1243 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 CNNM2Q9H8M5 875 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 PLIN4Q96Q06 1357 aa18.93■□□□□ 0.62
CLN6-216ENST00000636876 USP17L5A8MUK1 530 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 SLC10A3P09131 477 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 GJA5P36382 358 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 TFAP4Q01664 338 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 SEPT2Q15019 361 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 FAM47AQ5JRC9 791 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 CCDC84Q86UT8 332 aaPredicted RBP18.92■□□□□ 0.62
CLN6-216ENST00000636876 NEDD1Q8NHV4 660 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 CCDC102AQ96A19 550 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 OTUD5Q96G74 571 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLN6-216ENST00000636876 KRT23Q9C075 422 aa18.92■□□□□ 0.62
CLN6-216ENST00000636876 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
CLN6-216ENST00000636876 TSPY2A6NKD2 308 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 B4E1Z4 1266 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 ZKSCAN1P17029 563 aaPredicted RBP18.91■□□□□ 0.62
CLN6-216ENST00000636876 MCCP23508 829 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 PPATQ06203 517 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 TRDNQ13061 729 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 PPIL2Q13356 520 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 RAB3GAP1Q15042 981 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 TSGA10IPQ3SY00 556 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 SPRYD7Q5W111 196 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 CYP4F22Q6NT55 531 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 PAXIP1Q6ZW49 1069 aaPredicted RBP18.91■□□□□ 0.62
CLN6-216ENST00000636876 RASEFQ8IZ41 740 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 NKX2-3Q8TAU0 364 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 ESR2Q92731 530 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 TBC1D2Q9BYX2 928 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 ZHX2Q9Y6X8 837 aa18.91■□□□□ 0.62
CLN6-216ENST00000636876 PHIPQ8WWQ0 1821 aa18.9■□□□□ 0.62
CLN6-216ENST00000636876 IGKV6D-41A0A0C4DH26 115 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms