RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	CHCHD3	Q9NX63	227 aa	Known RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	ZBTB12	Q9Y330	459 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	NR2E3	Q9Y5X4	410 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	IL16	Q14005	1332 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	KDR	P35968	1356 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	BRWD1	Q9NSI6	2320 aa		4.61	□□□□□ -1.67
CHD2-225	ENST00000636861	RGPD2	P0DJD1	1756 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	AK9	Q5TCS8	1911 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	SMIM22	K7EJ46	135 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	FZD9	O00144	591 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	COQ9	O75208	318 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	PPFIA2	O75334	1257 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	CD2BP2	O95400	341 aa	Known RBP	4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	GPT	P24298	496 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	KRT85	P78386	507 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	TYRO3	Q06418	890 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	TMED1	Q13445	227 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	E2F4	Q16254	413 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	ERCC6L	Q2NKX8	1250 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	KIF4B	Q2VIQ3	1234 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	SLC4A8	Q2Y0W8	1093 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	TSGA10IP	Q3SY00	556 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	PREPL	Q4J6C6	727 aa	Predicted RBP	4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	TAX1BP1	Q86VP1	789 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	HOMER1	Q86YM7	354 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	RASAL3	Q86YV0	1011 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	KLHL23	Q8NBE8	558 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	AFAP1L1	Q8TED9	768 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	OSBPL9	Q96SU4	736 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	CRACR2A	Q9BSW2	395 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	USP26	Q9BXU7	913 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	LNPK	Q9C0E8	428 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	TNMD	Q9H2S6	317 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	TTYH1	Q9H313	450 aa	Predicted RBP	4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	SEMA6B	Q9H3T3	888 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	VIPAS39	Q9H9C1	493 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	PDRG1	Q9NUG6	133 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	SRP68	Q9UHB9	627 aa	Known RBP	4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	LCMT1	Q9UIC8	334 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	MCM8	Q9UJA3	840 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	ODF2L	Q9ULJ1	636 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	PLXNA3	P51805	1871 aa		4.6	□□□□□ -1.67
CHD2-225	ENST00000636861	NBEA	Q8NFP9	2946 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	CCDC69	A6NI79	296 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	BECN2	A8MW95	431 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	MYO1B	O43795	1136 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	KIN	O60870	393 aa	Known RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	PPFIA3	O75145	1194 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	TADA3	O75528	432 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	KRT38	O76015	456 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	CDKL5	O76039	1030 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ZSCAN22	P10073	491 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	FOSL2	P15408	326 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	PDC	P20941	246 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	SFPQ	P23246	707 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	HNRNPH1	P31943	449 aa	Known RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	GCK	P35557	465 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	MAGEA10	P43363	369 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	CLNS1A	P54105	237 aa	Known RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	EVC	P57679	992 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ETF1	P62495	437 aa	Known RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ST5	P78524	1137 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	APOBR	Q0VD83	1088 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	GNL2	Q13823	731 aa	Known RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	STX1A	Q16623	288 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	CCDC93	Q567U6	631 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	HSP90AB4P	Q58FF6	505 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	GORAB	Q5T7V8	394 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	RBM26	Q5T8P6	1007 aa	Known RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	TTC22	Q5TAA0	569 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ANKRD45	Q5TZF3	282 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	TSHZ1	Q6ZSZ6	1077 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	USP31	Q70CQ4	1352 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	TTC21B	Q7Z4L5	1316 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	IQCA1	Q86XH1	822 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	PRPF38A	Q8NAV1	312 aa	Known RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	NFATC2IP	Q8NCF5	419 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	CCDC26	Q8TAB7	109 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	MAGEC3	Q8TD91	643 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	SMARCC1	Q92922	1105 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	CCDC102A	Q96A19	550 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	CCDC97	Q96F63	343 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	TMX3	Q96JJ7	454 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	BAG1	Q99933	345 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	LARP6	Q9BRS8	491 aa	Known RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	INCENP	Q9NQS7	918 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ST7	Q9NRC1	585 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ZBTB40	Q9NUA8	1239 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	VPS18	Q9P253	973 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	ZDHHC9	Q9Y397	364 aa		4.59	□□□□□ -1.67
CHD2-225	ENST00000636861	EP300	Q09472	2414 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD2-225	ENST00000636861	SOS1	Q07889	1333 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD2-225	ENST00000636861	RPGRIP1L	Q68CZ1	1315 aa		4.58	□□□□□ -1.68
CHD2-225	ENST00000636861	LIN7A	O14910	233 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD2-225	ENST00000636861	CBFA2T2	O43439	604 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms