RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 METTL16Q86W50 562 aaKnown RBP6.78□□□□□ -1.32
CLN5-212ENST00000636602 SPACA3Q8IXA5 215 aa6.78□□□□□ -1.32
CLN5-212ENST00000636602 DRC1Q96MC2 740 aa6.78□□□□□ -1.32
CLN5-212ENST00000636602 ZNF576Q9H609 170 aa6.78□□□□□ -1.32
CLN5-212ENST00000636602 CCDC86Q9H6F5 360 aaKnown RBP6.78□□□□□ -1.32
CLN5-212ENST00000636602 NLRP2Q9NX02 1062 aa6.78□□□□□ -1.32
CLN5-212ENST00000636602 TCAF2A6NFQ2 919 aa6.77□□□□□ -1.33
CLN5-212ENST00000636602 HCLS1P14317 486 aaPredicted RBP6.77□□□□□ -1.33
CLN5-212ENST00000636602 PI16Q6UXB8 463 aa6.77□□□□□ -1.33
CLN5-212ENST00000636602 DBX2Q6ZNG2 339 aa6.77□□□□□ -1.33
CLN5-212ENST00000636602 EPS8L3Q8TE67 593 aaKnown RBP6.77□□□□□ -1.33
CLN5-212ENST00000636602 CCDC74AQ96AQ1 378 aa6.77□□□□□ -1.33
CLN5-212ENST00000636602 KCNK12Q9HB15 430 aa6.77□□□□□ -1.33
CLN5-212ENST00000636602 PPP1R1BQ9UD71 204 aaPredicted RBP6.77□□□□□ -1.33
CLN5-212ENST00000636602 PCDHGC5Q9Y5F6 944 aa6.77□□□□□ -1.33
CLN5-212ENST00000636602 ZNF862O60290 1169 aa6.76□□□□□ -1.33
CLN5-212ENST00000636602 CTSHP09668 335 aa6.76□□□□□ -1.33
CLN5-212ENST00000636602 RAD51AP2Q09MP3 1159 aa6.76□□□□□ -1.33
CLN5-212ENST00000636602 CCSER2Q9H7U1 834 aa6.76□□□□□ -1.33
CLN5-212ENST00000636602 C19orf73Q9NVV2 129 aa6.76□□□□□ -1.33
CLN5-212ENST00000636602 SMG5Q9UPR3 1016 aaKnown RBP6.76□□□□□ -1.33
CLN5-212ENST00000636602 NUAK1O60285 661 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 GLDCP23378 1020 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 GDNFP39905 211 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 SF3A1Q15459 793 aaKnown RBP6.75□□□□□ -1.33
CLN5-212ENST00000636602 NKPD1Q17RQ9 610 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 KIF4BQ2VIQ3 1234 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 GALNT12Q8IXK2 581 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 OSBPL7Q9BZF2 842 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 C12orf49Q9H741 205 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 DCP1AQ9NPI6 582 aaPredicted RBP6.75□□□□□ -1.33
CLN5-212ENST00000636602 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 PITPNM2Q9BZ72 1349 aa6.75□□□□□ -1.33
CLN5-212ENST00000636602 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
CLN5-212ENST00000636602 IGF2BP3O00425 579 aaKnown RBP eCLIP6.74□□□□□ -1.33
CLN5-212ENST00000636602 GIPC1O14908 333 aa6.74□□□□□ -1.33
CLN5-212ENST00000636602 FOXD2O60548 495 aaPredicted RBP6.74□□□□□ -1.33
CLN5-212ENST00000636602 NEFMP07197 916 aa6.74□□□□□ -1.33
CLN5-212ENST00000636602 ITPKAP23677 461 aa6.74□□□□□ -1.33
CLN5-212ENST00000636602 LINC00310P59036 64 aa6.74□□□□□ -1.33
CLN5-212ENST00000636602 ZC3H12CQ9C0D7 883 aaKnown RBP6.74□□□□□ -1.33
CLN5-212ENST00000636602 TGIF2Q9GZN2 237 aa6.74□□□□□ -1.33
CLN5-212ENST00000636602 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
CLN5-212ENST00000636602 PARD6AQ9NPB6 346 aa6.74□□□□□ -1.33
CLN5-212ENST00000636602 GADD45BO75293 160 aaPredicted RBP6.73□□□□□ -1.33
CLN5-212ENST00000636602 EPB41L4BQ9H329 900 aa6.73□□□□□ -1.33
CLN5-212ENST00000636602 CARS2Q9HA77 564 aaKnown RBP6.73□□□□□ -1.33
CLN5-212ENST00000636602 CAPN10Q9HC96 672 aa6.73□□□□□ -1.33
CLN5-212ENST00000636602 SSU72Q9NP77 194 aaKnown RBP6.73□□□□□ -1.33
CLN5-212ENST00000636602 CLCN7P51798 805 aa6.72□□□□□ -1.33
CLN5-212ENST00000636602 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLN5-212ENST00000636602 ISL2Q96A47 359 aa6.72□□□□□ -1.33
CLN5-212ENST00000636602 ACBD3Q9H3P7 528 aa6.72□□□□□ -1.33
CLN5-212ENST00000636602 FAM8A1Q9UBU6 413 aa6.72□□□□□ -1.33
CLN5-212ENST00000636602 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
CLN5-212ENST00000636602 USP17L7P0C7H9 530 aa6.71□□□□□ -1.34
CLN5-212ENST00000636602 KIAA0319Q5VV43 1072 aa6.71□□□□□ -1.34
CLN5-212ENST00000636602 NXPE4Q6UWF7 544 aa6.71□□□□□ -1.34
CLN5-212ENST00000636602 HS2ST1Q7LGA3 356 aa6.71□□□□□ -1.34
CLN5-212ENST00000636602 BCO2Q9BYV7 579 aa6.71□□□□□ -1.34
CLN5-212ENST00000636602 SRCIN1Q9C0H9 1055 aa6.71□□□□□ -1.34
CLN5-212ENST00000636602 IRF2BPLQ9H1B7 796 aa6.71□□□□□ -1.34
CLN5-212ENST00000636602 KRT82Q9NSB4 513 aa6.71□□□□□ -1.34
CLN5-212ENST00000636602 A0A0G2JLL6 359 aaPredicted RBP6.7□□□□□ -1.34
CLN5-212ENST00000636602 GNL2Q13823 731 aaKnown RBP6.7□□□□□ -1.34
CLN5-212ENST00000636602 TAF1CQ15572 869 aaPredicted RBP6.7□□□□□ -1.34
CLN5-212ENST00000636602 ZNF394Q53GI3 561 aa6.7□□□□□ -1.34
CLN5-212ENST00000636602 MEI1Q5TIA1 1274 aa6.7□□□□□ -1.34
CLN5-212ENST00000636602 USP48Q86UV5 1035 aa6.7□□□□□ -1.34
CLN5-212ENST00000636602 UBXN4Q92575 508 aa6.7□□□□□ -1.34
CLN5-212ENST00000636602 KCNN1Q92952 543 aa6.7□□□□□ -1.34
CLN5-212ENST00000636602 TINF2Q9BSI4 451 aa6.7□□□□□ -1.34
CLN5-212ENST00000636602 GGT7Q9UJ14 662 aa6.7□□□□□ -1.34
CLN5-212ENST00000636602 PCDHGB7Q9Y5F8 929 aa6.7□□□□□ -1.34
CLN5-212ENST00000636602 TNNI2P48788 182 aa6.69□□□□□ -1.34
CLN5-212ENST00000636602 HNRNPUQ00839 825 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLN5-212ENST00000636602 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
CLN5-212ENST00000636602 ZNF654Q8IZM8 581 aa6.69□□□□□ -1.34
CLN5-212ENST00000636602 SLC26A8Q96RN1 970 aa6.69□□□□□ -1.34
CLN5-212ENST00000636602 TANGO6Q9C0B7 1094 aa6.69□□□□□ -1.34
CLN5-212ENST00000636602 ZCCHC4Q9H5U6 513 aa6.69□□□□□ -1.34
CLN5-212ENST00000636602 DDX41Q9UJV9 622 aaKnown RBP6.69□□□□□ -1.34
CLN5-212ENST00000636602 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
CLN5-212ENST00000636602 GNAT3A8MTJ3 354 aa6.68□□□□□ -1.34
CLN5-212ENST00000636602 GSTP1P09211 210 aaKnown RBP6.68□□□□□ -1.34
CLN5-212ENST00000636602 BMP7P18075 431 aa6.68□□□□□ -1.34
CLN5-212ENST00000636602 GRM2Q14416 872 aa6.68□□□□□ -1.34
CLN5-212ENST00000636602 RNF214Q8ND24 703 aa6.68□□□□□ -1.34
CLN5-212ENST00000636602 EHD4Q9H223 541 aa6.68□□□□□ -1.34
CLN5-212ENST00000636602 PRDM10Q9NQV6 1147 aa6.68□□□□□ -1.34
CLN5-212ENST00000636602 PPP4R2Q9NY27 417 aa6.68□□□□□ -1.34
CLN5-212ENST00000636602 INPP5FQ9Y2H2 1132 aa6.68□□□□□ -1.34
CLN5-212ENST00000636602 SYN1P17600 705 aa6.67□□□□□ -1.34
CLN5-212ENST00000636602 GSTT1P30711 240 aa6.67□□□□□ -1.34
CLN5-212ENST00000636602 ST13P50502 369 aaKnown RBP6.67□□□□□ -1.34
CLN5-212ENST00000636602 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
CLN5-212ENST00000636602 RACK1P63244 317 aaKnown RBP6.67□□□□□ -1.34
CLN5-212ENST00000636602 RPS26P11Q5JNZ5 115 aaPredicted RBP6.67□□□□□ -1.34
CLN5-212ENST00000636602 SLC43A3Q8NBI5 491 aa6.67□□□□□ -1.34
CLN5-212ENST00000636602 ATP13A1Q9HD20 1204 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms