RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NUCKS1Q9H1E3 243 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 UBN1Q9NPG3 1134 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 SETDB1Q15047 1291 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 OTUD7BQ6GQQ9 843 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 ZNF467Q7Z7K2 595 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 C8orf58Q8NAV2 365 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 DDX27Q96GQ7 796 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 ZSCAN16Q9H4T2 348 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 RPS6KA2Q15349 733 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 SAMD15Q9P1V8 674 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 KRT86O43790 486 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 NUF2Q9BZD4 464 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 VPS41P49754 854 aa19.84■□□□□ 0.77
CACNA1A-227ENST00000636549 IL15P40933 162 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 PLEKHH1Q9ULM0 1364 aa19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 XPAP23025 273 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 ACBD5Q5T8D3 534 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 ZNF365Q70YC5 407 aa19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 MCUQ8NE86 351 aa19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 PHKBQ93100 1093 aa19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 USP40Q9NVE5 1235 aa19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 INPP5FQ9Y2H2 1132 aa19.83■□□□□ 0.77
CACNA1A-227ENST00000636549 RNASELQ05823 741 aaKnown RBP19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 WDR48Q8TAF3 677 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 GSTA1P08263 222 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 GSTA2P09210 222 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 ABI1Q8IZP0 508 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 CTTNBP2NLQ9P2B4 639 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 TSR3Q9UJK0 312 aaKnown RBP19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 COBLO75128 1261 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 NKX1-1Q15270 411 aaPredicted RBP19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 MYSM1Q5VVJ2 828 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 PHLDB2Q86SQ0 1253 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 VPS37BQ9H9H4 285 aa19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 TROQ12816 1431 aaPredicted RBP19.83■□□□□ 0.76
CACNA1A-227ENST00000636549 BUB1BO60566 1050 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 KIAA0825Q8IV33 1275 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 ZNF654Q8IZM8 581 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 OPA1O60313 960 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 DPP9Q86TI2 863 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 SPDYE1Q8NFV5 336 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 CAPN2P17655 700 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 KRT83P78385 493 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 MTHFSDQ2M296 383 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 KRT33BQ14525 404 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 NKIRAS1Q9NYS0 192 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 KCNQ4P56696 695 aa19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 RBBP5Q15291 538 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 TRIM56Q9BRZ2 755 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-227ENST00000636549 LRRC47Q8N1G4 583 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 PARP2Q9UGN5 583 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 NKTRP30414 1462 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 EXOC3O60645 756 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 CTAGE3PQ8IX95 158 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 TRIM35Q9UPQ4 493 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 NPHP3Q7Z494 1330 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 NEDD9Q14511 834 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 ANKRD42Q8N9B4 389 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 TTC14Q96N46 770 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 ZFYP08048 801 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 DENND2AQ9ULE3 1009 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 TNNQ9UQP3 1299 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 AKT3Q9Y243 479 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 RPL13P26373 211 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 GTF2A1P52655 376 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 ANO4Q32M45 955 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 TRIM50Q86XT4 487 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 SWAP70Q9UH65 585 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 UTP11Q9Y3A2 253 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 DEPTORQ8TB45 409 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 MIPOL1Q8TD10 442 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 ZBED2Q9BTP6 218 aa19.81■□□□□ 0.76
CACNA1A-227ENST00000636549 DLATP10515 647 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 ABCB4P21439 1286 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 ANKRD35Q8N283 1001 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 SNX29Q8TEQ0 813 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 TTC21BQ7Z4L5 1316 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 CREB3L3Q68CJ9 461 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 ARFGAP3Q9NP61 516 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 RTEL1Q9NZ71 1219 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 AK2P54819 239 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 KCNJ14Q9UNX9 436 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 CDR2Q01850 454 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 SPICE1Q8N0Z3 855 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 STIM2Q9P246 746 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 A1BGP04217 495 aa19.8■□□□□ 0.76
CACNA1A-227ENST00000636549 POLR2DO15514 142 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 PCDHB13Q9Y5F0 798 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 CALCRLQ16602 461 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 GPR161Q8N6U8 529 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 TTF2Q9UNY4 1162 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 GNAT2P19087 354 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 STK38LQ9Y2H1 464 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 KDRP35968 1356 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 AKAP4Q5JQC9 854 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 FYB2Q5VWT5 728 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 UHMK1Q8TAS1 419 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms