RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 TRIM17Q9Y577 477 aa9.81□□□□□ -0.84
SPTAN1-213ENST00000627809 PTCH2Q9Y6C5 1203 aa9.81□□□□□ -0.84
SPTAN1-213ENST00000627809 LAMA4Q16363 1823 aa9.81□□□□□ -0.84
SPTAN1-213ENST00000627809 MAGEB6P1A0A0J9YX57 407 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 A0A1W2PRG0 241 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 LDHCP07864 332 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 BCRP11274 1271 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 PDE4AP27815 886 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 SNAPC2Q13487 334 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 MTMR2Q13614 643 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 ZYXQ15942 572 aaKnown RBP9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 C17orf99Q6UX52 265 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 RASGRP2Q7LDG7 609 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 SIAH1Q8IUQ4 282 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 IL25Q9H293 177 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 TXNRD2Q9NNW7 524 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 INCENPQ9NQS7 918 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 ZBTB21Q9ULJ3 1066 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 GABRQQ9UN88 632 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 LCTP09848 1927 aa9.8□□□□□ -0.84
SPTAN1-213ENST00000627809 TBC1D12O60347 775 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 CTNND1O60716 968 aaKnown RBP9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 GH2P01242 217 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 CETPP11597 493 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 ANKRD45Q5TZF3 282 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 B4GALNT3Q6L9W6 998 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 SMC5Q8IY18 1101 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 SH3TC2Q8TF17 1288 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 CCDC136Q96JN2 1154 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 LNPKQ9C0E8 428 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 ECHDC1Q9NTX5 307 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 MCM3APO60318 1980 aa9.79□□□□□ -0.84
SPTAN1-213ENST00000627809 UNCXA6NJT0 531 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 TLR2O60603 784 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 AKR1B1P15121 316 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 USP5P45974 858 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 LACTBP83111 547 aaPredicted RBP9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 SP3Q02447 781 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 MAP3K12Q12852 859 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 SEPT2Q15019 361 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 VPS53Q5VIR6 699 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 ANKRD23Q86SG2 305 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 SLF2Q8IX21 1173 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 PLXNA1Q9UIW2 1896 aa9.78□□□□□ -0.84
SPTAN1-213ENST00000627809 GSG1L2A8MUP6 293 aa9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 CNMDO75829 334 aa9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 TRIM32Q13049 653 aa9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 MTFR1Q15390 333 aa9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 NOM1Q5C9Z4 860 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 TATDN1Q6P1N9 297 aa9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 STRBPQ96SI9 672 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 MCM9Q9NXL9 1143 aa9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 PI4KBQ9UBF8 816 aa9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 PTPN22Q9Y2R2 807 aa9.77□□□□□ -0.85
SPTAN1-213ENST00000627809 CEP290O15078 2479 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 A0A0D9SFI3 127 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 USP17L12C9JPN9 530 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 USP17L21D6R901 530 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 RBAK-RBAKDNI3L0D1 243 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 CXCL11O14625 94 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 BAG3O95817 575 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 MX1P20591 662 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 OSBPP22059 807 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 NUCB1Q02818 461 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 PRKCZQ05513 592 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 CTR9Q6PD62 1173 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 FBXO46Q6PJ61 603 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 CENPQQ7L2Z9 268 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 REM2Q8IYK8 340 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 ANKRD13CQ8N6S4 541 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 KBTBD3Q8NAB2 608 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 ZNF280CQ8ND82 737 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 FAM227BQ96M60 508 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 ASCC2Q9H1I8 757 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 PICK1Q9NRD5 415 aa9.76□□□□□ -0.85
SPTAN1-213ENST00000627809 PRDM1O75626 825 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 ELNP15502 786 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 TAL1P17542 331 aaPredicted RBP9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 PDE1AP54750 535 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 INHBEP58166 350 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 UBE3CQ15386 1083 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 Q3C1V9 767 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 ZNF589Q86UQ0 364 aaPredicted RBP9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 CHD1LQ86WJ1 897 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 CRACR2BQ8N4Y2 399 aaPredicted RBP9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 CHMP4CQ96CF2 233 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 SHISA4Q96DD7 197 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 P2RX7Q99572 595 aaKnown RBP9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 NOL10Q9BSC4 688 aaKnown RBP9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 NBPF3Q9H094 633 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 EFCC1Q9HA90 598 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 ZFYVE28Q9HCC9 887 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 HERC5Q9UII4 1024 aaKnown RBP9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 SERPINB13Q9UIV8 391 aa9.75□□□□□ -0.85
SPTAN1-213ENST00000627809 AGTPBP1Q9UPW5 1226 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms